data_B1X # _chem_comp.id B1X _chem_comp.name "5'-O-[(3-cyanobenzene-1-carbonyl)sulfamoyl]adenosine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H17 N7 O7 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-01-08 _chem_comp.pdbx_modified_date 2019-04-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 475.435 _chem_comp.one_letter_code ? _chem_comp.three_letter_code B1X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6IYL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal B1X C1 C4 C 0 1 Y N N N N N 13.358 6.267 20.319 3.980 -0.615 0.274 C1 B1X 1 B1X C2 C5 C 0 1 Y N N N N N 14.071 7.100 19.571 3.798 -2.003 0.156 C2 B1X 2 B1X C3 C6 C 0 1 Y N N N N N 13.629 8.327 19.328 4.937 -2.826 0.183 C3 B1X 3 B1X C4 C8 C 0 1 Y N N N N N 15.165 5.294 19.729 1.835 -1.086 0.077 C4 B1X 4 B1X N1 N1 N 0 1 Y N N N N N 12.465 8.763 19.834 6.129 -2.253 0.319 N1 B1X 5 B1X N2 N3 N 0 1 Y N N N N N 12.193 6.618 20.859 5.212 -0.133 0.402 N2 B1X 6 B1X N3 NAA N 0 1 N N N N N N 21.557 0.441 15.283 -3.481 -5.889 0.967 N3 B1X 7 B1X C5 CAH C 0 1 N N N N N N 20.913 1.604 16.071 -3.592 -4.900 0.420 C5 B1X 8 B1X C6 CAW C 0 1 Y N N N N N 20.296 2.818 16.795 -3.732 -3.653 -0.270 C6 B1X 9 B1X C7 CAN C 0 1 Y N N N N N 19.637 2.436 17.907 -3.467 -2.455 0.392 C7 B1X 10 B1X C8 CAK C 0 1 Y N N N N N 20.315 4.197 16.426 -4.129 -3.634 -1.609 C8 B1X 11 B1X C9 CAI C 0 1 Y N N N N N 19.680 5.172 17.235 -4.265 -2.431 -2.275 C9 B1X 12 B1X C10 CAL C 0 1 Y N N N N N 19.017 4.744 18.392 -4.009 -1.241 -1.624 C10 B1X 13 B1X C11 CAY C 0 1 Y N N N N N 18.983 3.373 18.728 -3.605 -1.246 -0.286 C11 B1X 14 B1X C12 CAV C 0 1 N N N N N N 18.372 2.841 19.887 -3.327 0.029 0.408 C12 B1X 15 B1X O1 OAC O 0 1 N N N N N N 18.014 3.568 20.809 -2.976 0.024 1.572 O1 B1X 16 B1X N4 NAS N 0 1 N N N N N N 18.299 1.465 19.868 -3.461 1.198 -0.250 N4 B1X 17 B1X S1 SBG S 0 1 N N N N N N 17.831 0.521 21.034 -3.149 2.626 0.528 S1 B1X 18 B1X O2 OAD O 0 1 N N N N N N 18.653 0.886 22.261 -3.346 3.657 -0.431 O2 B1X 19 B1X O3 OAE O 0 1 N N N N N N 18.133 -0.878 20.560 -3.848 2.571 1.764 O3 B1X 20 B1X O4 O5* O 0 1 N N N N N N 16.306 0.654 21.351 -1.667 2.637 0.873 O4 B1X 21 B1X C13 C5* C 0 1 N N N N N N 15.459 1.210 20.357 -0.812 2.885 -0.246 C13 B1X 22 B1X C14 C4* C 0 1 N N R N N N 14.217 1.821 21.007 0.647 2.873 0.215 C14 B1X 23 B1X O5 O4* O 0 1 N N N N N N 14.633 3.139 21.349 1.013 1.551 0.645 O5 B1X 24 B1X C15 C3* C 0 1 N N S N N N 13.156 2.054 19.937 1.571 3.245 -0.961 C15 B1X 25 B1X O6 O3* O 0 1 N N N N N N 12.319 0.885 19.792 2.319 4.423 -0.656 O6 B1X 26 B1X C16 C2* C 0 1 N N R N N N 12.427 3.143 20.566 2.513 2.025 -1.103 C16 B1X 27 B1X O7 O2* O 0 1 N N N N N N 11.577 2.598 21.593 3.855 2.445 -1.362 O7 B1X 28 B1X C17 C1* C 0 1 N N R N N N 13.517 3.976 21.198 2.401 1.363 0.294 C17 B1X 29 B1X N5 N9 N 0 1 Y N N N N N 14.017 5.136 20.399 2.725 -0.063 0.217 N5 B1X 30 B1X N6 N7 N 0 1 Y N N N N N 15.194 6.490 19.211 2.467 -2.223 0.035 N6 B1X 31 B1X C18 C2 C 0 1 Y N N N N N 11.723 7.902 20.617 6.249 -0.943 0.427 C18 B1X 32 B1X N7 N6 N 0 1 N N N N N N 14.414 9.096 18.573 4.821 -4.200 0.071 N7 B1X 33 B1X H1 H1 H 0 1 N N N N N N 15.942 4.550 19.633 0.763 -0.970 0.003 H1 B1X 34 B1X H7 H7 H 0 1 N N N N N N 19.610 1.390 18.173 -3.155 -2.464 1.426 H7 B1X 35 B1X H8 H8 H 0 1 N N N N N N 20.819 4.501 15.520 -4.331 -4.561 -2.125 H8 B1X 36 B1X H9 H9 H 0 1 N N N N N N 19.707 6.218 16.966 -4.571 -2.422 -3.311 H9 B1X 37 B1X H10 H10 H 0 1 N N N N N N 18.529 5.466 19.030 -4.117 -0.305 -2.151 H10 B1X 38 B1X H11 H11 H 0 1 N N N N N N 18.575 1.017 19.017 -3.741 1.202 -1.178 H11 B1X 39 B1X H12 H12 H 0 1 N N N N N N 15.152 0.419 19.657 -0.962 2.109 -0.996 H12 B1X 40 B1X H13 H13 H 0 1 N N N N N N 16.005 1.992 19.809 -1.050 3.858 -0.676 H13 B1X 41 B1X H14 H14 H 0 1 N N N N N N 13.844 1.226 21.854 0.782 3.580 1.034 H14 B1X 42 B1X H15 H15 H 0 1 N N N N N N 13.615 2.358 18.985 0.990 3.386 -1.872 H15 B1X 43 B1X H16 H16 H 0 1 N N N N N N 12.816 0.188 19.380 2.959 4.670 -1.337 H16 B1X 44 B1X H17 H17 H 0 1 N N N N N N 11.859 3.732 19.831 2.161 1.350 -1.882 H17 B1X 45 B1X H18 H18 H 0 1 N N N N N N 11.095 3.301 22.012 3.959 2.943 -2.183 H18 B1X 46 B1X H19 H19 H 0 1 N N N N N N 13.170 4.335 22.178 3.049 1.867 1.011 H19 B1X 47 B1X H20 H20 H 0 1 N N N N N N 10.783 8.225 21.039 7.237 -0.519 0.536 H20 B1X 48 B1X H21 H21 H 0 1 N N N N N N 13.995 9.997 18.466 3.945 -4.606 -0.027 H21 B1X 49 B1X H22 H22 H 0 1 N N N N N N 15.307 9.194 19.013 5.614 -4.758 0.091 H22 B1X 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal B1X N3 C5 TRIP N N 1 B1X C5 C6 SING N N 2 B1X C8 C6 DOUB Y N 3 B1X C8 C9 SING Y N 4 B1X C6 C7 SING Y N 5 B1X C9 C10 DOUB Y N 6 B1X C7 C11 DOUB Y N 7 B1X C10 C11 SING Y N 8 B1X N7 C3 SING N N 9 B1X C11 C12 SING N N 10 B1X N6 C2 SING Y N 11 B1X N6 C4 DOUB Y N 12 B1X C3 C2 SING Y N 13 B1X C3 N1 DOUB Y N 14 B1X C2 C1 DOUB Y N 15 B1X C4 N5 SING Y N 16 B1X O6 C15 SING N N 17 B1X N1 C18 SING Y N 18 B1X N4 C12 SING N N 19 B1X N4 S1 SING N N 20 B1X C12 O1 DOUB N N 21 B1X C15 C16 SING N N 22 B1X C15 C14 SING N N 23 B1X C1 N5 SING Y N 24 B1X C1 N2 SING Y N 25 B1X C13 C14 SING N N 26 B1X C13 O4 SING N N 27 B1X N5 C17 SING N N 28 B1X O3 S1 DOUB N N 29 B1X C16 C17 SING N N 30 B1X C16 O7 SING N N 31 B1X C18 N2 DOUB Y N 32 B1X C14 O5 SING N N 33 B1X S1 O4 SING N N 34 B1X S1 O2 DOUB N N 35 B1X C17 O5 SING N N 36 B1X C4 H1 SING N N 37 B1X C7 H7 SING N N 38 B1X C8 H8 SING N N 39 B1X C9 H9 SING N N 40 B1X C10 H10 SING N N 41 B1X N4 H11 SING N N 42 B1X C13 H12 SING N N 43 B1X C13 H13 SING N N 44 B1X C14 H14 SING N N 45 B1X C15 H15 SING N N 46 B1X O6 H16 SING N N 47 B1X C16 H17 SING N N 48 B1X O7 H18 SING N N 49 B1X C17 H19 SING N N 50 B1X C18 H20 SING N N 51 B1X N7 H21 SING N N 52 B1X N7 H22 SING N N 53 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor B1X SMILES ACDLabs 12.01 "c21n(cnc1c(ncn2)N)C4OC(COS(NC(c3cc(C#N)ccc3)=O)(=O)=O)C(C4O)O" B1X InChI InChI 1.03 InChI=1S/C18H17N7O7S/c19-5-9-2-1-3-10(4-9)17(28)24-33(29,30)31-6-11-13(26)14(27)18(32-11)25-8-23-12-15(20)21-7-22-16(12)25/h1-4,7-8,11,13-14,18,26-27H,6H2,(H,24,28)(H2,20,21,22)/t11-,13-,14-,18-/m1/s1 B1X InChIKey InChI 1.03 MLNMSDSFICXLTI-XWXWGSFUSA-N B1X SMILES_CANONICAL CACTVS 3.385 "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[S](=O)(=O)NC(=O)c4cccc(c4)C#N)[C@@H](O)[C@H]3O" B1X SMILES CACTVS 3.385 "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[S](=O)(=O)NC(=O)c4cccc(c4)C#N)[CH](O)[CH]3O" B1X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1cc(cc(c1)C(=O)NS(=O)(=O)OC[C@@H]2[C@H]([C@H]([C@@H](O2)n3cnc4c3ncnc4N)O)O)C#N" B1X SMILES "OpenEye OEToolkits" 2.0.6 "c1cc(cc(c1)C(=O)NS(=O)(=O)OCC2C(C(C(O2)n3cnc4c3ncnc4N)O)O)C#N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier B1X "SYSTEMATIC NAME" ACDLabs 12.01 "5'-O-[(3-cyanobenzene-1-carbonyl)sulfamoyl]adenosine" B1X "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-(3-cyanophenyl)carbonylsulfamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site B1X 'Create component' 2019-01-08 PDBJ B1X 'Initial release' 2019-04-17 RCSB # loop_ _software.name _software.version _software.description rdkit 2025.03.3 'Core functionality.' pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.' # loop_ _pdbe_chem_comp_atom_depiction.comp_id _pdbe_chem_comp_atom_depiction.atom_id _pdbe_chem_comp_atom_depiction.element _pdbe_chem_comp_atom_depiction.model_Cartn_x _pdbe_chem_comp_atom_depiction.model_Cartn_y _pdbe_chem_comp_atom_depiction.pdbx_ordinal B1X C1 C 5.598 -2.147 1 B1X C2 C 5.598 -3.647 2 B1X C3 C 4.299 -4.397 3 B1X C4 C 7.893 -2.897 4 B1X N1 N 3.000 -3.647 5 B1X N2 N 4.299 -1.397 6 B1X N3 N 21.835 3.032 7 B1X C5 C 20.466 3.645 8 B1X C6 C 19.096 4.257 9 B1X C7 C 17.881 3.378 10 B1X C8 C 18.942 5.750 11 B1X C9 C 17.573 6.362 12 B1X C10 C 16.358 5.482 13 B1X C11 C 16.512 3.990 14 B1X C12 C 15.297 3.111 15 B1X O1 O 15.451 1.619 16 B1X N4 N 13.928 3.723 17 B1X S1 S 12.713 2.844 18 B1X O2 O 11.833 4.059 19 B1X O3 O 13.592 1.629 20 B1X O4 O 11.498 1.964 21 B1X C13 C 10.129 2.577 22 B1X C14 C 8.913 1.697 23 B1X O5 O 8.911 0.197 24 B1X C15 C 7.487 2.163 25 B1X O6 O 7.027 3.590 26 B1X C16 C 6.604 0.951 27 B1X O7 O 5.104 0.954 28 B1X C17 C 7.483 -0.264 29 B1X N5 N 7.018 -1.690 30 B1X N6 N 7.018 -4.104 31 B1X C18 C 3.000 -2.147 32 B1X N7 N 4.299 -5.897 33 # loop_ _pdbe_chem_comp_bond_depiction.comp_id _pdbe_chem_comp_bond_depiction.atom_id_1 _pdbe_chem_comp_bond_depiction.atom_id_2 _pdbe_chem_comp_bond_depiction.value_order _pdbe_chem_comp_bond_depiction.bond_dir _pdbe_chem_comp_bond_depiction.pdbx_ordinal B1X N3 C5 TRIPLE NONE 1 B1X C5 C6 SINGLE NONE 2 B1X C8 C6 DOUBLE NONE 3 B1X C8 C9 SINGLE NONE 4 B1X C6 C7 SINGLE NONE 5 B1X C9 C10 DOUBLE NONE 6 B1X C7 C11 DOUBLE NONE 7 B1X C10 C11 SINGLE NONE 8 B1X N7 C3 SINGLE NONE 9 B1X C11 C12 SINGLE NONE 10 B1X N6 C2 SINGLE NONE 11 B1X N6 C4 DOUBLE NONE 12 B1X C3 C2 DOUBLE NONE 13 B1X C3 N1 SINGLE NONE 14 B1X C2 C1 SINGLE NONE 15 B1X C4 N5 SINGLE NONE 16 B1X C15 O6 SINGLE BEGINDASH 17 B1X N1 C18 DOUBLE NONE 18 B1X N4 C12 SINGLE NONE 19 B1X N4 S1 SINGLE NONE 20 B1X C12 O1 DOUBLE NONE 21 B1X C15 C16 SINGLE NONE 22 B1X C15 C14 SINGLE NONE 23 B1X C1 N5 SINGLE NONE 24 B1X C1 N2 DOUBLE NONE 25 B1X C14 C13 SINGLE BEGINWEDGE 26 B1X C13 O4 SINGLE NONE 27 B1X C17 N5 SINGLE BEGINWEDGE 28 B1X O3 S1 DOUBLE NONE 29 B1X C16 C17 SINGLE NONE 30 B1X C16 O7 SINGLE BEGINDASH 31 B1X C18 N2 SINGLE NONE 32 B1X C14 O5 SINGLE NONE 33 B1X S1 O4 SINGLE NONE 34 B1X S1 O2 DOUBLE NONE 35 B1X C17 O5 SINGLE NONE 36 # loop_ _pdbe_chem_comp_substructure.comp_id _pdbe_chem_comp_substructure.substructure_name _pdbe_chem_comp_substructure.id _pdbe_chem_comp_substructure.substructure_type _pdbe_chem_comp_substructure.substructure_smiles _pdbe_chem_comp_substructure.substructure_inchis _pdbe_chem_comp_substructure.substructure_inchikeys B1X MurckoScaffold S1 scaffold 'O=C(NS(=O)(=O)OC[C@@H]1CC[C@H](n2cnc3cncnc32)O1)c1ccccc1' InChI=1S/C17H17N5O5S/c23-17(12-4-2-1-3-5-12)21-28(24,25)26-9-13-6-7-15(27-13)22-11-20-14-8-18-10-19-16(14)22/h1-5,8,10-11,13,15H,6-7,9H2,(H,21,23)/t13-,15+/m0/s1 WQLRCUZARUOABP-DZGCQCFKSA-N B1X adenine F1 fragment 'Nc1ncnc2nc[nH]c12' InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10) GFFGJBXGBJISGV-UHFFFAOYSA-N B1X amide F2 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N B1X imidazole F3 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N B1X phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N B1X purine F5 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N B1X pyrimidine F6 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N B1X ribose F7 fragment OCC1OCC(O)C1O InChI=1S/C5H10O4/c6-1-4-5(8)3(7)2-9-4/h3-8H,1-2H2 KZVAAIRBJJYZOW-UHFFFAOYSA-N # loop_ _pdbe_chem_comp_substructure_mapping.comp_id _pdbe_chem_comp_substructure_mapping.atom_id _pdbe_chem_comp_substructure_mapping.substructure_id _pdbe_chem_comp_substructure_mapping.substructure_ordinal B1X C1 S1 1 B1X C2 S1 1 B1X C3 S1 1 B1X C4 S1 1 B1X N1 S1 1 B1X N2 S1 1 B1X C6 S1 1 B1X C7 S1 1 B1X C8 S1 1 B1X C9 S1 1 B1X C10 S1 1 B1X C11 S1 1 B1X C12 S1 1 B1X O1 S1 1 B1X N4 S1 1 B1X S1 S1 1 B1X O2 S1 1 B1X O3 S1 1 B1X O4 S1 1 B1X C13 S1 1 B1X C14 S1 1 B1X O5 S1 1 B1X C15 S1 1 B1X C16 S1 1 B1X C17 S1 1 B1X N5 S1 1 B1X N6 S1 1 B1X C18 S1 1 B1X N1 F1 1 B1X C3 F1 1 B1X C2 F1 1 B1X C1 F1 1 B1X N2 F1 1 B1X C18 F1 1 B1X N5 F1 1 B1X C4 F1 1 B1X N6 F1 1 B1X N7 F1 1 B1X N4 F2 1 B1X C12 F2 1 B1X O1 F2 1 B1X C11 F2 1 B1X C1 F3 1 B1X C2 F3 1 B1X N6 F3 1 B1X C4 F3 1 B1X N5 F3 1 B1X C6 F4 1 B1X C8 F4 1 B1X C9 F4 1 B1X C10 F4 1 B1X C11 F4 1 B1X C7 F4 1 B1X N6 F5 1 B1X C4 F5 1 B1X N5 F5 1 B1X C1 F5 1 B1X C2 F5 1 B1X C3 F5 1 B1X N1 F5 1 B1X C18 F5 1 B1X N2 F5 1 B1X C2 F6 1 B1X C3 F6 1 B1X N1 F6 1 B1X C18 F6 1 B1X N2 F6 1 B1X C1 F6 1 B1X C16 F7 1 B1X C15 F7 1 B1X C14 F7 1 B1X O5 F7 1 B1X C17 F7 1 B1X C13 F7 1 B1X O4 F7 1 B1X O6 F7 1 B1X O7 F7 1 # _pdbe_chem_comp_rdkit_properties.comp_id B1X _pdbe_chem_comp_rdkit_properties.exactmw 475.091 _pdbe_chem_comp_rdkit_properties.amw 475.443 _pdbe_chem_comp_rdkit_properties.lipinskiHBA 14 _pdbe_chem_comp_rdkit_properties.lipinskiHBD 5 _pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9 _pdbe_chem_comp_rdkit_properties.NumHBD 4 _pdbe_chem_comp_rdkit_properties.NumHBA 13 _pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 33 _pdbe_chem_comp_rdkit_properties.NumAtoms 50 _pdbe_chem_comp_rdkit_properties.NumHeteroatoms 15 _pdbe_chem_comp_rdkit_properties.NumAmideBonds 1 _pdbe_chem_comp_rdkit_properties.FractionCSP3 0.278 _pdbe_chem_comp_rdkit_properties.NumRings 4 _pdbe_chem_comp_rdkit_properties.NumAromaticRings 3 _pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1 _pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1 _pdbe_chem_comp_rdkit_properties.NumHeterocycles 3 _pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2 _pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0 _pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0 _pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4 _pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.labuteASA 210.258 _pdbe_chem_comp_rdkit_properties.tpsa 215.570 _pdbe_chem_comp_rdkit_properties.CrippenClogP -2.328 _pdbe_chem_comp_rdkit_properties.CrippenMR 105.592 _pdbe_chem_comp_rdkit_properties.chi0v 16.213 _pdbe_chem_comp_rdkit_properties.chi1v 9.456 _pdbe_chem_comp_rdkit_properties.chi2v 4.286 _pdbe_chem_comp_rdkit_properties.chi3v 4.286 _pdbe_chem_comp_rdkit_properties.chi4v 2.750 _pdbe_chem_comp_rdkit_properties.chi0n 32.396 _pdbe_chem_comp_rdkit_properties.chi1n 16.249 _pdbe_chem_comp_rdkit_properties.chi2n 3.603 _pdbe_chem_comp_rdkit_properties.chi3n 3.603 _pdbe_chem_comp_rdkit_properties.chi4n 2.237 _pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.680 _pdbe_chem_comp_rdkit_properties.kappa1 9.667 _pdbe_chem_comp_rdkit_properties.kappa2 8.690 _pdbe_chem_comp_rdkit_properties.kappa3 4.460 _pdbe_chem_comp_rdkit_properties.Phi 2.546 # _pdbe_chem_comp_external_mappings.comp_id B1X _pdbe_chem_comp_external_mappings.source UniChem _pdbe_chem_comp_external_mappings.resource PubChem _pdbe_chem_comp_external_mappings.resource_id 138753134 # loop_ _pdbe_chem_comp_rdkit_conformer.comp_id _pdbe_chem_comp_rdkit_conformer.atom_id _pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit _pdbe_chem_comp_rdkit_conformer.rdkit_method _pdbe_chem_comp_rdkit_conformer.rdkit_ordinal B1X C1 4.619 -0.122 -0.453 ETKDGv3 1 B1X C2 5.919 0.259 -0.041 ETKDGv3 2 B1X C3 6.287 1.539 -0.073 ETKDGv3 3 B1X C4 5.721 -1.854 0.409 ETKDGv3 4 B1X N1 5.323 2.494 -0.572 ETKDGv3 5 B1X N2 3.727 0.729 -0.857 ETKDGv3 6 B1X N3 -8.484 4.164 1.218 ETKDGv3 7 B1X C5 -8.051 3.178 0.795 ETKDGv3 8 B1X C6 -7.512 1.951 0.270 ETKDGv3 9 B1X C7 -6.055 1.833 0.026 ETKDGv3 10 B1X C8 -8.322 0.918 -0.003 ETKDGv3 11 B1X C9 -7.763 -0.334 -0.547 ETKDGv3 12 B1X C10 -6.447 -0.444 -0.766 ETKDGv3 13 B1X C11 -5.534 0.688 -0.459 ETKDGv3 14 B1X C12 -4.082 0.547 -0.724 ETKDGv3 15 B1X O1 -3.692 -0.309 -1.564 ETKDGv3 16 B1X N4 -3.114 1.345 -0.028 ETKDGv3 17 B1X S1 -1.434 1.284 -0.440 ETKDGv3 18 B1X O2 -1.259 1.756 -1.857 ETKDGv3 19 B1X O3 -0.675 2.194 0.487 ETKDGv3 20 B1X O4 -0.884 -0.309 -0.263 ETKDGv3 21 B1X C13 0.461 -0.366 -0.676 ETKDGv3 22 B1X C14 1.007 -1.782 -0.451 ETKDGv3 23 B1X O5 2.290 -1.878 -1.038 ETKDGv3 24 B1X C15 1.103 -2.129 1.040 ETKDGv3 25 B1X O6 0.725 -3.471 1.231 ETKDGv3 26 B1X C16 2.572 -1.935 1.324 ETKDGv3 27 B1X O7 3.052 -2.811 2.311 ETKDGv3 28 B1X C17 3.203 -2.236 -0.025 ETKDGv3 29 B1X N5 4.458 -1.504 -0.194 ETKDGv3 30 B1X N6 6.581 -0.873 0.505 ETKDGv3 31 B1X C18 4.120 2.119 -0.943 ETKDGv3 32 B1X N7 7.567 1.969 0.392 ETKDGv3 33 B1X H1 5.938 -2.847 0.780 ETKDGv3 34 B1X H7 -5.429 2.694 0.219 ETKDGv3 35 B1X H8 -9.390 0.990 0.169 ETKDGv3 36 B1X H9 -8.421 -1.164 -0.768 ETKDGv3 37 B1X H10 -6.053 -1.372 -1.162 ETKDGv3 38 B1X H11 -3.393 1.925 0.793 ETKDGv3 39 B1X H12 0.536 -0.133 -1.762 ETKDGv3 40 B1X H13 1.086 0.356 -0.104 ETKDGv3 41 B1X H14 0.329 -2.497 -0.969 ETKDGv3 42 B1X H15 0.481 -1.455 1.676 ETKDGv3 43 B1X H16 0.491 -3.569 2.191 ETKDGv3 44 B1X H17 2.763 -0.874 1.613 ETKDGv3 45 B1X H18 2.728 -2.456 3.180 ETKDGv3 46 B1X H19 3.407 -3.327 -0.114 ETKDGv3 47 B1X H20 3.415 2.854 -1.305 ETKDGv3 48 B1X H21 8.266 1.286 0.760 ETKDGv3 49 B1X H22 7.818 2.981 0.364 ETKDGv3 50 #