Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 9HA    

Bonds between two atoms of the molecule

Total Number of Bonds: 90


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C22 C20 C C sing 1.53 N N
2 C1 C C C doub 1.38 N Y
3 C1 C2 C C sing 1.38 N Y
4 C C5 C C sing 1.38 N Y
5 O6 C20 O C sing 1.43 N N
6 O6 C18 O C sing 1.43 N N
7 C2 C3 C C doub 1.38 N Y
8 C20 C23 C C sing 1.53 N N
9 C20 C21 C C sing 1.53 N N
10 C29 C30 C C sing 1.53 N N
11 C29 C28 C C sing 1.53 N N
12 C30 C25 C C sing 1.53 N N
13 C60 C18 C C sing 1.53 N N
14 O1 C7 O C doub 1.22 N N
15 C5 C4 C C doub 1.38 N Y
16 C18 C8 C C sing 1.53 N N
17 C25 C24 C C sing 1.53 N N
18 C25 C26 C C sing 1.53 N N
19 C8 C9 C C sing 1.51 N N
20 C8 N C N sing 1.46 N N
21 C3 C4 C C sing 1.38 N Y
22 C3 C6 C C sing 1.51 N N
23 C24 C10 C C sing 1.53 N N
24 N1 C9 N C sing 1.35 N N
25 N1 C10 N C sing 1.46 N N
26 O3 C11 O C doub 1.21 N N
27 C28 C27 C C sing 1.53 N N
28 C7 N C N sing 1.35 N N
29 C7 O C O sing 1.35 N N
30 C9 O2 C O doub 1.21 N N
31 C10 C11 C C sing 1.51 N N
32 C27 C26 C C sing 1.53 N N
33 C11 N2 C N sing 1.35 N N
34 C6 O C O sing 1.45 N N
35 C16 C15 C C sing 1.51 N N
36 O5 C15 O C doub 1.21 N N
37 C15 N3 C N sing 1.35 N N
38 N2 N3 N N sing 1.4 N N
39 C13 C14 C C sing 1.51 N N
40 C13 C12 C C sing 1.53 N N
41 N3 C12 N C sing 1.47 N N
42 N4 C14 N C sing 1.35 N N
43 C14 O4 C O doub 1.21 N N
44 N H1 N H sing 0.97 N N
45 C H2 C H sing 1.08 N N
46 C1 H3 C H sing 1.08 N N
47 C10 H4 C H sing 1.09 N N
48 C12 H5 C H sing 1.09 N N
49 C12 H6 C H sing 1.09 N N
50 C13 H7 C H sing 1.09 N N
51 C13 H8 C H sing 1.09 N N
52 C16 H9 C H sing 1.09 N N
53 C16 H10 C H sing 1.09 N N
54 C16 H11 C H sing 1.09 N N
55 C18 H12 C H sing 1.09 N N
56 C2 H13 C H sing 1.08 N N
57 C21 H14 C H sing 1.09 N N
58 C21 H15 C H sing 1.09 N N
59 C21 H16 C H sing 1.09 N N
60 C22 H17 C H sing 1.09 N N
61 C22 H18 C H sing 1.09 N N
62 C22 H19 C H sing 1.09 N N
63 C23 H20 C H sing 1.09 N N
64 C23 H21 C H sing 1.09 N N
65 C23 H22 C H sing 1.09 N N
66 C24 H23 C H sing 1.09 N N
67 C24 H24 C H sing 1.09 N N
68 C25 H25 C H sing 1.09 N N
69 C26 H26 C H sing 1.09 N N
70 C26 H27 C H sing 1.09 N N
71 C27 H28 C H sing 1.09 N N
72 C27 H29 C H sing 1.09 N N
73 C28 H30 C H sing 1.09 N N
74 C28 H31 C H sing 1.09 N N
75 C29 H32 C H sing 1.09 N N
76 C29 H33 C H sing 1.09 N N
77 C30 H34 C H sing 1.09 N N
78 C30 H35 C H sing 1.09 N N
79 C4 H36 C H sing 1.08 N N
80 C5 H37 C H sing 1.08 N N
81 C6 H38 C H sing 1.09 N N
82 C6 H39 C H sing 1.09 N N
83 C60 H40 C H sing 1.09 N N
84 C60 H41 C H sing 1.09 N N
85 C60 H42 C H sing 1.09 N N
86 C8 H43 C H sing 1.09 N N
87 N1 H44 N H sing 0.97 N N
88 N2 H45 N H sing 0.97 N N
89 N4 H46 N H sing 0.97 N N
90 N4 H47 N H sing 0.97 N N