Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : 8YC    

Bonds between two atoms of the molecule

Total Number of Bonds: 41


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C12 C11 C C sing 1.55 N N
2 C12 C13 C C sing 1.55 N N
3 C11 C10 C C sing 1.54 N N
4 C13 C9 C C sing 1.54 N N
5 C10 C9 C C sing 1.54 N N
6 C9 C14 C C sing 1.53 N N
7 C9 N4 C N sing 1.47 N N
8 C14 O2 C O sing 1.43 N N
9 N4 C8 N C sing 1.47 N N
10 C8 C5 C C sing 1.51 N N
11 N2 C6 N C trip 1.14 N N
12 C6 C1 C C sing 1.47 N N
13 C5 O1 C O doub 1.21 N N
14 C5 N1 C N sing 1.35 N N
15 N3 C7 N C trip 1.14 N N
16 N1 C1 N C sing 1.47 N N
17 N1 C2 N C sing 1.47 N N
18 C1 C3 C C sing 1.54 N N
19 C7 C2 C C sing 1.47 N N
20 C2 C4 C C sing 1.55 N N
21 C3 C4 C C sing 1.55 N N
22 C1 H1 C H sing 1.09 N N
23 C3 H2 C H sing 1.09 N N
24 C3 H3 C H sing 1.09 N N
25 C4 H4 C H sing 1.09 N N
26 C4 H5 C H sing 1.09 N N
27 C2 H6 C H sing 1.09 N N
28 C8 H9 C H sing 1.09 N N
29 C8 H10 C H sing 1.09 N N
30 N4 H11 N H sing 1.01 N N
31 C14 H13 C H sing 1.09 N N
32 C14 H14 C H sing 1.09 N N
33 O2 H15 O H sing 0.97 N N
34 C10 H16 C H sing 1.09 N N
35 C10 H17 C H sing 1.09 N N
36 C11 H18 C H sing 1.09 N N
37 C11 H19 C H sing 1.09 N N
38 C12 H20 C H sing 1.09 N N
39 C12 H21 C H sing 1.09 N N
40 C13 H22 C H sing 1.09 N N
41 C13 H23 C H sing 1.09 N N