Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : 8I5    

Bonds between two atoms of the molecule

Total Number of Bonds: 94


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N6 C6 N C sing 1.47 N N
2 C6 C5 C C sing 1.53 N N
3 CH3 N9 C N sing 1.47 N N
4 O4 C4 O C sing 1.43 N N
5 N9 C9 N C sing 1.47 N N
6 C5 C4 C C sing 1.53 N N
7 C5 O5 C O sing 1.43 N N
8 C4 C3 C C sing 1.53 N N
9 C8 C9 C C sing 1.53 N N
10 C8 C7 C C sing 1.53 N N
11 C9 C10 C C sing 1.53 N N
12 O5 C1 O C sing 1.43 N N
13 C3 O3 C O sing 1.43 N N
14 C3 C2 C C sing 1.53 N N
15 C10 O1 C O sing 1.43 N N
16 C10 C11 C C sing 1.53 N N
17 O1 C1 O C sing 1.43 N N
18 N7 C7 N C sing 1.47 N N
19 C1 C2 C C sing 1.53 N N
20 C7 C12 C C sing 1.53 N N
21 C2 N2 C N sing 1.47 N N
22 C12 C11 C C sing 1.53 N N
23 C12 O12 C O sing 1.43 N N
24 C11 O11 C O sing 1.43 N N
25 O11 C13 O C sing 1.43 N N
26 O17 C17 O C sing 1.43 N N
27 C13 O16 C O sing 1.44 N N
28 C13 C14 C C sing 1.55 N N
29 O16 C16 O C sing 1.44 N N
30 C16 C17 C C sing 1.53 N N
31 C16 C15 C C sing 1.54 N N
32 N23 C19 N C sing 1.47 N N
33 C19 C20 C C sing 1.53 N N
34 C19 C18 C C sing 1.53 N N
35 C14 C15 C C sing 1.54 N N
36 C14 O14 C O sing 1.43 N N
37 O20 C20 O C sing 1.43 N N
38 O18 C15 O C sing 1.43 N N
39 O18 C18 O C sing 1.43 N N
40 C20 C21 C C sing 1.53 N N
41 C18 O22 C O sing 1.43 N N
42 C23 N19 C N sing 1.47 N N
43 C23 C22 C C sing 1.53 N N
44 C21 O21 C O sing 1.43 N N
45 C21 C22 C C sing 1.53 N N
46 O22 C22 O C sing 1.43 N N
47 C6 H1 C H sing 1.09 N N
48 C6 H2 C H sing 1.09 N N
49 C14 H3 C H sing 1.09 N N
50 C15 H4 C H sing 1.09 N N
51 C16 H5 C H sing 1.09 N N
52 C10 H6 C H sing 1.09 N N
53 C12 H7 C H sing 1.09 N N
54 C13 H8 C H sing 1.09 N N
55 CH3 H9 C H sing 1.09 N N
56 CH3 H10 C H sing 1.09 N N
57 CH3 H11 C H sing 1.09 N N
58 C1 H12 C H sing 1.09 N N
59 C11 H13 C H sing 1.09 N N
60 C17 H14 C H sing 1.09 N N
61 C17 H15 C H sing 1.09 N N
62 C18 H16 C H sing 1.09 N N
63 C19 H17 C H sing 1.09 N N
64 C2 H18 C H sing 1.09 N N
65 C20 H19 C H sing 1.09 N N
66 C21 H20 C H sing 1.09 N N
67 C22 H21 C H sing 1.09 N N
68 C23 H22 C H sing 1.09 N N
69 C23 H23 C H sing 1.09 N N
70 C3 H24 C H sing 1.09 N N
71 C4 H25 C H sing 1.09 N N
72 C5 H26 C H sing 1.09 N N
73 C7 H27 C H sing 1.09 N N
74 C8 H28 C H sing 1.09 N N
75 C8 H29 C H sing 1.09 N N
76 C9 H30 C H sing 1.09 N N
77 N19 H31 N H sing 1.01 N N
78 N19 H32 N H sing 1.01 N N
79 N2 H34 N H sing 1.01 N N
80 N2 H35 N H sing 1.01 N N
81 N23 H37 N H sing 1.01 N N
82 N23 H38 N H sing 1.01 N N
83 N6 H40 N H sing 1.01 N N
84 N6 H41 N H sing 1.01 N N
85 N7 H43 N H sing 1.01 N N
86 N7 H44 N H sing 1.01 N N
87 N9 H46 N H sing 1.01 N N
88 O12 H48 O H sing 0.97 N N
89 O14 H49 O H sing 0.97 N N
90 O17 H50 O H sing 0.97 N N
91 O20 H51 O H sing 0.97 N N
92 O21 H52 O H sing 0.97 N N
93 O3 H53 O H sing 0.97 N N
94 O4 H54 O H sing 0.97 N N