Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 8GY    

Bonds between two atoms of the molecule

Total Number of Bonds: 55


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N23 C24 N C doub 1.31 N Y
2 N23 N22 N N sing 1.29 N Y
3 C24 N25 C N sing 1.35 N Y
4 N22 C21 N C doub 1.31 N Y
5 C21 N25 C N sing 1.37 N Y
6 C21 C19 C C sing 1.48 N N
7 N25 C26 N C sing 1.47 N N
8 C28 C26 C C sing 1.53 N N
9 C19 C18 C C doub 1.39 N Y
10 C19 N20 C N sing 1.33 N Y
11 C18 C17 C C sing 1.39 N Y
12 O30 C29 O C sing 1.43 N N
13 C26 C29 C C sing 1.53 N N
14 N20 C15 N C doub 1.32 N Y
15 C17 C16 C C doub 1.38 N Y
16 C15 C16 C C sing 1.39 N Y
17 C15 N10 C N sing 1.39 N N
18 C9 N10 C N sing 1.47 N N
19 C9 C8 C C sing 1.51 N N
20 N10 C11 N C sing 1.34 N N
21 C8 C7 C C doub 1.38 N Y
22 C8 C13 C C sing 1.4 N Y
23 C11 O12 C O doub 1.22 N N
24 C11 C13 C C sing 1.48 N N
25 C7 C6 C C sing 1.38 N Y
26 C13 C14 C C doub 1.4 N Y
27 C6 C5 C C doub 1.39 N Y
28 C14 C5 C C sing 1.38 N Y
29 C5 O4 C O sing 1.36 N N
30 O4 C2 O C sing 1.43 N N
31 C3 C2 C C sing 1.53 N N
32 C2 C1 C C sing 1.53 N N
33 C6 H1 C H sing 1.08 N N
34 C7 H2 C H sing 1.08 N N
35 C17 H3 C H sing 1.08 N N
36 C24 H4 C H sing 1.08 N N
37 C26 H5 C H sing 1.09 N N
38 C28 H6 C H sing 1.09 N N
39 C28 H7 C H sing 1.09 N N
40 C28 H8 C H sing 1.09 N N
41 C1 H9 C H sing 1.09 N N
42 C1 H10 C H sing 1.09 N N
43 C1 H11 C H sing 1.09 N N
44 C2 H12 C H sing 1.09 N N
45 C3 H13 C H sing 1.09 N N
46 C3 H14 C H sing 1.09 N N
47 C3 H15 C H sing 1.09 N N
48 C9 H16 C H sing 1.09 N N
49 C9 H17 C H sing 1.09 N N
50 C14 H18 C H sing 1.08 N N
51 C16 H19 C H sing 1.08 N N
52 C18 H20 C H sing 1.08 N N
53 C29 H21 C H sing 1.09 N N
54 C29 H22 C H sing 1.09 N N
55 O30 H23 O H sing 0.97 N N