Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : 89A    

Bonds between two atoms of the molecule

Total Number of Bonds: 48


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CAD CBF C C sing 1.53 N N
2 CBB CBC C C sing 1.51 N N
3 CBB NBJ C N sing 1.35 N N
4 CBB OBM C O doub 1.21 N N
5 CBC CBD C C sing 1.53 N N
6 CBC NBK C N sing 1.47 N N
7 CBE CBF C C sing 1.51 N N
8 CBE NBK C N sing 1.35 N N
9 CBE OBN C O doub 1.21 N N
10 CBF O3 C O sing 1.43 N N
11 C1 C2 C C sing 1.54 N N
12 C1 O5 C O sing 1.45 N N
13 C1 O6 C O sing 1.44 N N
14 C2 N2 C N sing 1.46 N N
15 C2 C3 C C sing 1.53 N N
16 N2 C7 N C sing 1.35 N N
17 C3 O3 C O sing 1.43 N N
18 C3 C4 C C sing 1.53 N N
19 C4 O4 C O sing 1.43 N N
20 C4 C5 C C sing 1.54 N N
21 C5 O5 C O sing 1.45 N N
22 C5 C6 C C sing 1.55 N N
23 C6 O6 C O sing 1.44 N N
24 C7 O7 C O doub 1.21 N N
25 C7 C8 C C sing 1.51 N N
26 CAD HAD1 C H sing 1.09 N N
27 CAD HAD2 C H sing 1.09 N N
28 CAD HAD3 C H sing 1.09 N N
29 CBF HBF C H sing 1.09 N N
30 CBC HBC C H sing 1.09 N N
31 NBJ HBJ1 N H sing 0.97 N N
32 NBJ HBJ2 N H sing 0.97 N N
33 CBD HBD1 C H sing 1.09 N N
34 CBD HBD2 C H sing 1.09 N N
35 CBD HBD3 C H sing 1.09 N N
36 NBK HBK N H sing 0.97 N N
37 C1 H1 C H sing 1.09 N N
38 C2 H2 C H sing 1.09 N N
39 N2 HA N H sing 0.97 N N
40 C3 H3 C H sing 1.09 N N
41 C4 H4 C H sing 1.09 N N
42 O4 HB O H sing 0.97 N N
43 C5 H5 C H sing 1.09 N N
44 C6 H61C C H sing 1.09 N N
45 C6 H62C C H sing 1.09 N N
46 C8 H81C C H sing 1.09 N N
47 C8 H82C C H sing 1.09 N N
48 C8 H83C C H sing 1.09 N N