Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 89A

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 47


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 CAD C CAD N N N 0 -1.46 2.847 0.24
2 CBB C CBB N N N 0 -5.267 -0.832 -0.609
3 CBC C CBC S N N 0 -4.169 -0.607 0.399
4 CBD C CBD N N N 0 -4.777 -0.118 1.715
5 CBE C CBE N N N 0 -1.96 0.419 0.322
6 CBF C CBF R N N 0 -1.001 1.456 -0.204
7 NBJ N NBJ N N N 0 -6.245 -1.722 -0.352
8 NBK N NBK N N N 0 -3.236 0.401 -0.112
9 OBM O OBM N N N 0 -5.27 -0.211 -1.651
10 OBN O OBN N N N 0 -1.584 -0.398 1.134
11 C1 C C1 R N N 0 3.073 0.409 1.013
12 C2 C C2 R N N 0 2.009 -0.518 0.405
13 N2 N N2 N N N 0 2.662 -1.56 -0.391
14 C3 C C3 R N N 0 1.085 0.311 -0.494
15 O3 O O3 N N N 0 0.307 1.199 0.312
16 C4 C C4 S N N 0 1.933 1.124 -1.479
17 O4 O O4 N N N 0 2.575 0.242 -2.401
18 C6 C C6 N N N 0 2.295 2.536 0.541
19 C5 C C5 R N N 0 2.995 1.902 -0.684
20 O5 O O5 N N N 0 3.874 0.924 -0.074
21 O6 O O6 N N N 0 2.404 1.549 1.583
22 C7 C C7 N N N 0 3.111 -2.682 0.206
23 O7 O O7 N N N 0 2.974 -2.829 1.402
24 C8 C C8 N N N 0 3.783 -3.753 -0.613
25 HAD1 H HAD1 N N N 0 -0.736 3.591 -0.092
26 HAD2 H HAD2 N N N 0 -2.433 3.065 -0.2
27 HAD3 H HAD3 N N N 0 -1.537 2.874 1.327
28 HBJ1 H HBJ1 N N N 0 -6.243 -2.218 0.481
29 HBF H HBF N N N 0 -0.978 1.411 -1.293
30 HBC H HBC N N N 0 -3.636 -1.542 0.57
31 HBJ2 H HBJ2 N N N 0 -6.952 -1.867 -1.001
32 HBD1 H HBD1 N N N 0 -5.471 -0.868 2.095
33 HBD2 H HBD2 N N N 0 -3.984 0.045 2.444
34 HBD3 H HBD3 N N N 0 -5.311 0.817 1.544
35 HBK H HBK N N N 0 -3.537 1.055 -0.762
36 H1 H H1 N N N 0 3.686 -0.116 1.745
37 H2 H H2 N N N 0 1.427 -0.979 1.204
38 HA H HA N N N 0 2.772 -1.442 -1.347
39 H3 H H3 N N N 0 0.422 -0.354 -1.046
40 H4 H H4 N N N 0 1.295 1.821 -2.022
41 HB H HB N N N 0 3.129 0.691 -3.054
42 H5 H H5 N N N 0 3.531 2.625 -1.298
43 H61C H H61C N N N 0 2.803 3.454 0.834
44 H62C H H62C N N N 0 1.247 2.737 0.317
45 H81C H H81C N N N 0 4.669 -3.34 -1.096
46 H82C H H82C N N N 0 4.076 -4.578 0.038
47 H83C H H83C N N N 0 3.092 -4.118 -1.372