Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
827
Bonds between two atoms of the molecule
Total Number of Bonds: 73
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
N28
C27
N
C
sing
1.47
N
N
2
O30
C29
O
C
sing
1.43
N
N
3
C27
C26
C
C
sing
1.53
N
N
4
C27
C08
C
C
sing
1.53
N
N
5
C26
C24
C
C
sing
1.53
N
N
6
C29
C06
C
C
sing
1.53
N
N
7
C29
C31
C
C
sing
1.53
N
N
8
N32
C33
N
C
sing
1.47
N
N
9
N32
C31
N
C
sing
1.47
N
N
10
C06
O07
C
O
sing
1.43
N
N
11
C06
O05
C
O
sing
1.43
N
N
12
O07
C08
O
C
sing
1.43
N
N
13
C24
N25
C
N
sing
1.47
N
N
14
C24
C11
C
C
sing
1.53
N
N
15
C08
C09
C
C
sing
1.53
N
N
16
C31
C02
C
C
sing
1.53
N
N
17
O05
C04
O
C
sing
1.43
N
N
18
C09
C11
C
C
sing
1.53
N
N
19
C09
O10
C
O
sing
1.43
N
N
20
C11
O12
C
O
sing
1.43
N
N
21
C02
O03
C
O
sing
1.43
N
N
22
C02
C04
C
C
sing
1.53
N
N
23
C02
C01
C
C
sing
1.53
N
N
24
O12
C13
O
C
sing
1.43
N
N
25
C16
C15
C
C
sing
1.53
N
N
26
C16
O17
C
O
sing
1.43
N
N
27
O14
C15
O
C
sing
1.43
N
N
28
O14
C13
O
C
sing
1.43
N
N
29
C15
C18
C
C
sing
1.53
N
N
30
C13
C22
C
C
sing
1.53
N
N
31
C18
C20
C
C
sing
1.53
N
N
32
C18
O19
C
O
sing
1.43
N
N
33
C22
C20
C
C
sing
1.53
N
N
34
C22
N23
C
N
sing
1.47
N
N
35
C20
O21
C
O
sing
1.43
N
N
36
C13
H1
C
H
sing
1.09
N
N
37
C15
H2
C
H
sing
1.09
N
N
38
C20
H3
C
H
sing
1.09
N
N
39
C22
H4
C
H
sing
1.09
N
N
40
C24
H5
C
H
sing
1.09
N
N
41
C04
H6
C
H
sing
1.09
N
N
42
C04
H7
C
H
sing
1.09
N
N
43
C06
H8
C
H
sing
1.09
N
N
44
C11
H9
C
H
sing
1.09
N
N
45
O17
H10
O
H
sing
0.97
N
N
46
C18
H11
C
H
sing
1.09
N
N
47
C27
H12
C
H
sing
1.09
N
N
48
C09
H13
C
H
sing
1.09
N
N
49
C31
H14
C
H
sing
1.09
N
N
50
C01
H15
C
H
sing
1.09
N
N
51
C01
H16
C
H
sing
1.09
N
N
52
C01
H17
C
H
sing
1.09
N
N
53
C16
H18
C
H
sing
1.09
N
N
54
C16
H19
C
H
sing
1.09
N
N
55
C26
H20
C
H
sing
1.09
N
N
56
C26
H21
C
H
sing
1.09
N
N
57
C08
H22
C
H
sing
1.09
N
N
58
O10
H23
O
H
sing
0.97
N
N
59
C29
H24
C
H
sing
1.09
N
N
60
O03
H25
O
H
sing
0.97
N
N
61
N32
H26
N
H
sing
1.01
N
N
62
C33
H28
C
H
sing
1.09
N
N
63
C33
H29
C
H
sing
1.09
N
N
64
C33
H30
C
H
sing
1.09
N
N
65
O30
H31
O
H
sing
0.97
N
N
66
N28
H32
N
H
sing
1.01
N
N
67
N28
H33
N
H
sing
1.01
N
N
68
N25
H35
N
H
sing
1.01
N
N
69
N25
H36
N
H
sing
1.01
N
N
70
N23
H38
N
H
sing
1.01
N
N
71
N23
H39
N
H
sing
1.01
N
N
72
O21
H41
O
H
sing
0.97
N
N
73
O19
H42
O
H
sing
0.97
N
N