Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 80I    

Bonds between two atoms of the molecule

Total Number of Bonds: 73


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N22 C23 N C sing 1.47 N N
2 N22 C21 N C sing 1.34 N N
3 C23 C24 C C sing 1.54 N N
4 C21 O25 C O doub 1.21 N N
5 C21 C20 C C sing 1.51 N N
6 C24 C20 C C sing 1.55 N N
7 C20 C19 C C sing 1.53 N N
8 C08 C09 C C doub 1.38 N Y
9 C08 C07 C C sing 1.39 N Y
10 C09 C10 C C sing 1.39 N Y
11 C19 C18 C C sing 1.53 N N
12 C07 N04 C N sing 1.37 N Y
13 C07 C06 C C doub 1.41 N Y
14 C10 C11 C C doub 1.38 N Y
15 N04 C03 N C sing 1.38 N Y
16 O31 P29 O P doub 1.48 N N
17 C18 C26 C C sing 1.51 N N
18 C18 N17 C N sing 1.47 N N
19 O32 P29 O P sing 1.61 N N
20 C06 C11 C C sing 1.41 N Y
21 C06 C05 C C sing 1.41 N Y
22 C11 O12 C O sing 1.36 N N
23 O33 C26 O C doub 1.21 N N
24 O01 C02 O C doub 1.22 N N
25 C03 C02 C C sing 1.47 N N
26 C03 C05 C C doub 1.36 N Y
27 C26 C27 C C sing 1.51 N N
28 C02 N14 C N sing 1.35 N N
29 P29 O28 P O sing 1.61 N N
30 P29 O30 P O sing 1.61 N N
31 O34 C16 O C doub 1.21 N N
32 N17 C16 N C sing 1.35 N N
33 O12 C13 O C sing 1.43 N N
34 C16 C15 C C sing 1.51 N N
35 O28 C27 O C sing 1.43 N N
36 N14 C15 N C sing 1.46 N N
37 C15 C35 C C sing 1.53 N N
38 C35 C36 C C sing 1.53 N N
39 C36 C38 C C sing 1.53 N N
40 C36 C37 C C sing 1.53 N N
41 C10 H1 C H sing 1.08 N N
42 C13 H2 C H sing 1.09 N N
43 C13 H3 C H sing 1.09 N N
44 C13 H4 C H sing 1.09 N N
45 C15 H5 C H sing 1.09 N N
46 C20 H6 C H sing 1.09 N N
47 C24 H7 C H sing 1.09 N N
48 C24 H8 C H sing 1.09 N N
49 C05 H9 C H sing 1.08 N N
50 C08 H10 C H sing 1.08 N N
51 C09 H11 C H sing 1.08 N N
52 C18 H12 C H sing 1.09 N N
53 C19 H13 C H sing 1.09 N N
54 C19 H14 C H sing 1.09 N N
55 C23 H15 C H sing 1.09 N N
56 C27 H16 C H sing 1.09 N N
57 C27 H17 C H sing 1.09 N N
58 C35 H18 C H sing 1.09 N N
59 C35 H19 C H sing 1.09 N N
60 C36 H20 C H sing 1.09 N N
61 C37 H21 C H sing 1.09 N N
62 C37 H22 C H sing 1.09 N N
63 C37 H23 C H sing 1.09 N N
64 C38 H24 C H sing 1.09 N N
65 C38 H25 C H sing 1.09 N N
66 C38 H26 C H sing 1.09 N N
67 N04 H27 N H sing 0.97 N N
68 N14 H28 N H sing 0.97 N N
69 N17 H29 N H sing 0.97 N N
70 O30 H30 O H sing 0.97 N N
71 O32 H31 O H sing 0.97 N N
72 N22 H32 N H sing 0.97 N N
73 C23 H33 C H sing 1.09 N N