Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 5G9    

Bonds between two atoms of the molecule

Total Number of Bonds: 37


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N3 C7 N C sing 1.38 N N
2 S C7 S C sing 1.71 N Y
3 S C6 S C sing 1.76 N Y
4 C7 N2 C N doub 1.3 N Y
5 C6 C5 C C sing 1.47 N N
6 C6 C8 C C doub 1.37 N Y
7 C2 C1 C C doub 1.41 N Y
8 C2 C3 C C sing 1.37 N Y
9 C1 N1 C N sing 1.33 N Y
10 C1 C C C sing 1.42 N Y
11 N1 C5 N C doub 1.32 N Y
12 C3 C4 C C doub 1.39 N Y
13 C5 C16 C C sing 1.41 N Y
14 C N C N doub 1.33 N Y
15 C C15 C C sing 1.41 N Y
16 N2 C8 N C sing 1.32 N Y
17 C4 N C N sing 1.31 N Y
18 C16 C15 C C doub 1.36 N Y
19 C8 C9 C C sing 1.48 N N
20 C10 C9 C C doub 1.39 N Y
21 C10 C11 C C sing 1.38 N Y
22 C9 C14 C C sing 1.4 N Y
23 CL C11 CL C sing 1.74 N N
24 C11 C12 C C doub 1.38 N Y
25 C14 C13 C C doub 1.38 N Y
26 C12 C13 C C sing 1.38 N Y
27 N3 H1 N H sing 0.97 N N
28 N3 H2 N H sing 0.97 N N
29 C4 H3 C H sing 1.08 N N
30 C10 H4 C H sing 1.08 N N
31 C13 H5 C H sing 1.08 N N
32 C15 H6 C H sing 1.08 N N
33 C12 H7 C H sing 1.08 N N
34 C14 H8 C H sing 1.08 N N
35 C16 H9 C H sing 1.08 N N
36 C2 H10 C H sing 1.08 N N
37 C3 H11 C H sing 1.08 N N