Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 5G9

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 34


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N Y N 0 1.256 -0.037 0.041
2 N3 N N2 N N N 0 -3.619 -3.863 -0.002
3 C4 C C1 N Y N 0 5.085 1.309 0.221
4 C5 C C2 N Y N 0 1.013 -1.337 0.074
5 C6 C C3 N Y N 0 -0.377 -1.814 0.008
6 C7 C C4 N Y N 0 -2.538 -3.003 -0.026
7 C8 C C5 N Y N 0 -1.488 -1.04 -0.223
8 C10 C C6 N Y N 0 -2.295 1.272 0.242
9 C13 C C7 N Y N 0 -0.44 2.323 -1.534
10 C15 C C8 N Y N 0 3.35 -1.846 0.233
11 CL CL CL1 N N N 0 -3.312 3.694 0.884
12 C11 C C9 N Y N 0 -2.231 2.636 0.033
13 C12 C C10 N Y N 0 -1.306 3.16 -0.853
14 C14 C C11 N Y N 0 -0.495 0.959 -1.334
15 C9 C C12 N Y N 0 -1.425 0.424 -0.442
16 N2 N N3 N Y N 0 -2.619 -1.725 -0.231
17 S S S1 N Y N 0 -0.914 -3.48 0.202
18 C16 C C13 N Y N 0 2.061 -2.275 0.171
19 C C C14 N Y N 0 3.6 -0.456 0.198
20 C1 C C15 N Y N 0 2.503 0.435 0.099
21 C2 C C16 N Y N 0 2.757 1.821 0.063
22 C3 C C17 N Y N 0 4.056 2.241 0.125
23 N N N4 N Y N 0 4.845 0.019 0.254
24 H1 H H1 N N N 0 -4.515 -3.52 -0.144
25 H2 H H2 N N N 0 -3.482 -4.81 0.157
26 H3 H H3 N N N 0 6.107 1.655 0.269
27 H4 H H4 N N N 0 -3.014 0.864 0.937
28 H5 H H5 N N N 0 0.28 2.738 -2.224
29 H7 H H7 N N N 0 -1.259 4.227 -1.013
30 H6 H H6 N N N 0 4.164 -2.552 0.308
31 H8 H H8 N N N 0 0.181 0.306 -1.866
32 H9 H H9 N N N 0 1.84 -3.332 0.196
33 H10 H H10 N N N 0 1.948 2.531 -0.013
34 H11 H H11 N N N 0 4.283 3.297 0.1