Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 59D    

Bonds between two atoms of the molecule

Total Number of Bonds: 69


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C05 C04 C C doub 1.38 N Y
2 C05 C06 C C sing 1.38 N Y
3 C04 C03 C C sing 1.38 N Y
4 C01 C02 C C sing 1.53 N N
5 F C14 F C sing 1.35 N N
6 C06 C07 C C doub 1.39 N Y
7 C15 C14 C C doub 1.38 N Y
8 C15 C16 C C sing 1.38 N Y
9 C14 C13 C C sing 1.38 N Y
10 C03 C02 C C sing 1.51 N N
11 C03 C1 C C doub 1.38 N Y
12 C02 O01 C O sing 1.43 N N
13 C16 C11 C C doub 1.38 N Y
14 C07 C1 C C sing 1.39 N Y
15 C07 N01 C N sing 1.4 N N
16 C13 C12 C C doub 1.38 N Y
17 N01 C08 N C sing 1.35 N N
18 C11 C12 C C sing 1.38 N Y
19 C11 C10 C C sing 1.51 N N
20 O02 C08 O C doub 1.22 N N
21 C08 C09 C C sing 1.48 N N
22 N02 C09 N C doub 1.32 N Y
23 N02 N03 N N sing 1.29 N Y
24 C09 C22 C C sing 1.4 N Y
25 C10 N03 C N sing 1.46 N N
26 N03 C17 N C sing 1.34 N Y
27 C22 C17 C C doub 1.36 N Y
28 C22 C21 C C sing 1.51 N N
29 C17 C18 C C sing 1.51 N N
30 C19 C18 C C sing 1.53 N N
31 C21 N04 C N sing 1.48 N N
32 C18 C20 C C sing 1.53 N N
33 N04 C23 N C sing 1.35 N N
34 N04 C20 N C sing 1.47 N N
35 C27 N1 C N sing 1.36 N Y
36 C27 C26 C C doub 1.35 N Y
37 N1 C24 N C sing 1.38 N Y
38 C26 C25 C C sing 1.4 N Y
39 C24 C25 C C doub 1.38 N Y
40 C24 C23 C C sing 1.47 N N
41 C23 O1 C O doub 1.22 N N
42 N1 H1 N H sing 0.97 N N
43 C10 H2 C H sing 1.09 N N
44 C10 H3 C H sing 1.09 N N
45 C13 H4 C H sing 1.08 N N
46 C15 H5 C H sing 1.08 N N
47 C20 H6 C H sing 1.09 N N
48 C20 H7 C H sing 1.09 N N
49 C21 H8 C H sing 1.09 N N
50 C21 H9 C H sing 1.09 N N
51 C26 H10 C H sing 1.08 N N
52 C01 H11 C H sing 1.09 N N
53 C01 H12 C H sing 1.09 N N
54 C01 H13 C H sing 1.09 N N
55 C02 H14 C H sing 1.09 N N
56 O01 H15 O H sing 0.97 N N
57 C04 H16 C H sing 1.08 N N
58 C05 H17 C H sing 1.08 N N
59 C06 H18 C H sing 1.08 N N
60 N01 H19 N H sing 0.97 N N
61 C12 H20 C H sing 1.08 N N
62 C16 H21 C H sing 1.08 N N
63 C18 H22 C H sing 1.09 N N
64 C19 H23 C H sing 1.09 N N
65 C19 H24 C H sing 1.09 N N
66 C19 H25 C H sing 1.09 N N
67 C25 H26 C H sing 1.08 N N
68 C27 H27 C H sing 1.08 N N
69 C1 H28 C H sing 1.08 N N