Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 544    

Bonds between two atoms of the molecule

Total Number of Bonds: 71


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N CA N C sing 1.44 N N
2 N C1A N C sing 1.37 N N
3 N HN N H sing 0.99 N N
4 CA CB C C sing 1.53 N N
5 CA C C C sing 1.52 N N
6 CA HA1 C H sing 1.1 N N
7 CB CG C C sing 1.51 N N
8 CB HB1 C H sing 1.1 N N
9 CB HB2 C H sing 1.1 N N
10 CG CD1 C C doub 1.39 N Y
11 CG CD2 C C sing 1.39 N Y
12 CD1 CE1 C C sing 1.39 N Y
13 CD1 HD11 C H sing 1.09 N N
14 CD2 CE2 C C doub 1.39 N Y
15 CD2 HD21 C H sing 1.09 N N
16 CE1 CZ C C doub 1.4 N Y
17 CE1 HE11 C H sing 1.09 N N
18 CE2 CZ C C sing 1.39 N Y
19 CE2 HE21 C H sing 1.09 N N
20 CZ OH C O sing 1.36 N N
21 OH C3A O C sing 1.43 N N
22 C1A C1F C C doub 1.35 N N
23 C1A C1B C C sing 1.51 N N
24 C1F C1G C C sing 1.49 N N
25 C1F H1F1 C H sing 1.09 N N
26 C1B H1B1 C H sing 1.1 N N
27 C1B H1B2 C H sing 1.1 N N
28 C1B H1B3 C H sing 1.1 N N
29 C1H C1I C C doub 1.38 N Y
30 C1H C1M C C sing 1.38 N Y
31 C1H C1G C C sing 1.48 N N
32 C1I C1J C C sing 1.39 N Y
33 C1I H1I1 C H sing 1.09 N N
34 C1J C1K C C doub 1.39 N Y
35 C1J H1J1 C H sing 1.09 N N
36 C1K C1L C C sing 1.4 N Y
37 C1K H1K1 C H sing 1.09 N N
38 C1L C1M C C doub 1.39 N Y
39 C1L H1L1 C H sing 1.09 N N
40 C1M H1M1 C H sing 1.09 N N
41 C1G O1G C O doub 1.22 N N
42 O3F C3G O C sing 1.36 N Y
43 O3F C3D O C sing 1.36 N Y
44 C3G N3H C N doub 1.31 N Y
45 C3G C3I C C sing 1.44 N Y
46 N3H C3C N C sing 1.36 N Y
47 C3C C3D C C doub 1.35 N Y
48 C3C C3B C C sing 1.5 N N
49 C3D C3E C C sing 1.47 N N
50 C3E H3E1 C H sing 1.11 N N
51 C3E H3E2 C H sing 1.11 N N
52 C3E H3E3 C H sing 1.11 N N
53 C3I C3N C C doub 1.4 N Y
54 C3I C3J C C sing 1.4 N Y
55 C3N C3M C C sing 1.39 N Y
56 C3N H3N1 C H sing 1.09 N N
57 C3M C3L C C doub 1.39 N Y
58 C3M H3M1 C H sing 1.09 N N
59 C3L C3K C C sing 1.4 N Y
60 C3L H3L1 C H sing 1.09 N N
61 C3K C3J C C doub 1.39 N Y
62 C3K H3K1 C H sing 1.09 N N
63 C3J H3J1 C H sing 1.09 N N
64 C3A C3B C C sing 1.53 N N
65 C3A H3A1 C H sing 1.09 N N
66 C3A H3A2 C H sing 1.09 N N
67 C3B H3B1 C H sing 1.1 N N
68 C3B H3B2 C H sing 1.1 N N
69 O2 C O C doub 1.23 N N
70 O1 C O C sing 1.35 N N
71 O1 HO11 O H sing 0.98 N N