Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 3TP    

Bonds between two atoms of the molecule

Total Number of Bonds: 50


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C2 C3 C C sing 1.51 N N
2 C2 C1 C C sing 1.55 N N
3 C2 N6 C N sing 1.46 N N
4 C2 H2 C H sing 1.09 N N
5 C3 O5 C O doub 1.23 N N
6 C3 N4 C N sing 1.38 N N
7 C10 C11 C C sing 1.52 N Y
8 C10 N4 C N sing 1.46 N Y
9 C10 H10 C H sing 1.09 N N
10 C11 C12 C C sing 1.52 N Y
11 C11 H11 C H sing 1.1 N N
12 C12 C13 C C sing 1.52 N Y
13 C12 H12 C H sing 1.1 N N
14 C13 N4 C N sing 1.46 N Y
15 C13 H13 C H sing 1.09 N N
16 C20 C1 C C sing 1.52 N N
17 C20 N21 C N doub 1.27 N Y
18 C20 O24 C O sing 1.34 N Y
19 C22 C25 C C sing 1.43 N Y
20 C22 N21 C N sing 1.36 N Y
21 C22 N23 C N doub 1.34 N Y
22 C25 C26 C C sing 1.4 N Y
23 C25 C30 C C doub 1.4 N Y
24 C26 C27 C C doub 1.39 N Y
25 C26 H26 C H sing 1.09 N N
26 C27 C28 C C sing 1.39 N Y
27 C27 H27 C H sing 1.09 N N
28 C29 C30 C C sing 1.39 N Y
29 C29 C28 C C doub 1.39 N Y
30 C29 H29 C H sing 1.09 N N
31 C30 H30 C H sing 1.09 N N
32 C1 C44 C C sing 1.54 N N
33 C1 H1 C H sing 1.1 N N
34 N6 HN61 N H sing 1.0 N N
35 N6 HN62 N H sing 1.0 N N
36 N23 O24 N O sing 1.4 N Y
37 C28 S34 C S sing 1.75 N N
38 S34 O35 S O doub 1.46 N N
39 S34 O36 S O doub 1.46 N N
40 S34 C37 S C sing 1.78 N N
41 C37 H371 C H sing 1.09 N N
42 C37 H372 C H sing 1.09 N N
43 C37 H373 C H sing 1.09 N N
44 C44 H441 C H sing 1.1 N N
45 C44 H442 C H sing 1.1 N N
46 C44 H443 C H sing 1.1 N N
47 C10 H10A C H sing 1.1 N N
48 C11 H11A C H sing 1.09 N N
49 C12 H12A C H sing 1.09 N N
50 C13 H13A C H sing 1.1 N N