Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 3TP

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 48


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C2 C C2 S N N 0 0.147 -2.748 4.209
2 C3 C C3 N N N 0 0.813 -4.004 3.707
3 O5 O O5 N N N 0 0.155 -5.028 3.52
4 C10 C C10 N Y N 0 2.967 -5.034 3.013
5 C11 C C11 N Y N 0 4.299 -4.42 2.611
6 C12 C C12 N Y N 0 4.437 -3.251 3.577
7 C13 C C13 N Y N 0 3.012 -2.729 3.689
8 C20 C C20 N Y N 0 0.422 -3.484 6.627
9 C22 C C22 N Y N 0 1.884 -3.786 7.98
10 C25 C C25 N Y N 0 3.048 -3.553 8.784
11 C26 C C26 N Y N 0 3.476 -4.523 9.692
12 C27 C C27 N Y N 0 4.609 -4.297 10.473
13 C29 C C29 N Y N 0 4.889 -2.131 9.441
14 C30 C C30 N Y N 0 3.756 -2.357 8.66
15 C1 C C1 S N N 0 -0.557 -3.007 5.561
16 N4 N N4 N Y N 0 2.176 -3.91 3.491
17 N6 N N6 N N N 0 -0.775 -2.367 3.145
18 N21 N N21 N Y N 0 1.436 -2.861 7.082
19 N23 N N23 N Y N 0 1.169 -4.913 8.057
20 O24 O O24 N Y N 0 0.155 -4.698 7.116
21 C28 C C28 N Y N 0 5.316 -3.101 10.348
22 S34 S S34 N N N 0 6.734 -2.818 11.326
23 O35 O O35 N N N 0 6.915 -1.378 11.449
24 O36 O O36 N N N 0 6.652 -3.64 12.525
25 C37 C C37 N N N 0 8.078 -3.456 10.351
26 C44 C C44 N N N 0 -1.312 -1.769 6.068
27 H2 H H2 N N N 0 0.924 -1.984 4.296
28 H10 H H10 N N N 0 2.46 -5.544 2.188
29 H11 H H11 N N N 0 4.245 -4.045 1.582
30 H12 H H12 N N N 0 4.782 -3.616 4.552
31 H13 H H13 N N N 0 2.802 -2.262 4.656
32 H26 H H26 N N N 0 2.937 -5.461 9.801
33 H27 H H27 N N N 0 4.933 -5.059 11.177
34 H29 H H29 N N N 0 5.432 -1.195 9.335
35 H30 H H30 N N N 0 3.436 -1.591 7.957
36 H1 H H1 N N N 0 -1.308 -3.797 5.415
37 HN61 H 1HN6 N N N 0 -1.065 -3.071 2.499
38 HN62 H 2HN6 N N N 0 -0.92 -1.395 2.974
39 H371 H 1H37 N N N 0 7.702 -3.679 9.351
40 H372 H 2H37 N N N 0 8.86 -2.697 10.304
41 H373 H 3H37 N N N 0 8.451 -4.362 10.83
42 H441 H 1H44 N N N 0 -1.062 -0.884 5.471
43 H442 H 2H44 N N N 0 -1.07 -1.545 7.113
44 H443 H 3H44 N N N 0 -2.396 -1.91 5.998
45 H10A H H10A N N N 0 3.082 -5.738 3.845
46 H11A H H11A N N N 0 5.127 -5.131 2.676
47 H12A H H12A N N N 0 5.138 -2.487 3.23
48 H13A H H13A N N N 0 2.778 -2.017 2.89