Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 31B    

Bonds between two atoms of the molecule

Total Number of Bonds: 94


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C26 C27 C C doub 1.38 N Y
2 C26 C25 C C sing 1.38 N Y
3 C27 C22 C C sing 1.4 N Y
4 C25 C24 C C doub 1.38 N Y
5 O13 C21 O C doub 1.21 N N
6 C22 C21 C C sing 1.48 N N
7 C22 C23 C C doub 1.4 N Y
8 C21 O12 C O sing 1.35 N N
9 C24 C23 C C sing 1.38 N Y
10 C20 O12 C O sing 1.45 N N
11 C20 C19 C C sing 1.53 N N
12 C19 N6 C N sing 1.47 N N
13 O11 C18 O C doub 1.21 N N
14 N6 C18 N C sing 1.35 N N
15 C18 C17 C C sing 1.51 N N
16 C17 C16 C C sing 1.53 N N
17 C16 N5 C N sing 1.46 N N
18 O7 C12 O C sing 1.43 N N
19 N5 C15 N C sing 1.35 N N
20 O10 C15 O C doub 1.21 N N
21 C12 C13 C C sing 1.54 N N
22 C12 C6 C C sing 1.55 N N
23 C13 O14 C O sing 1.43 N N
24 C13 C5 C C sing 1.54 N N
25 C15 C14 C C sing 1.51 N N
26 N1 C9 N C sing 1.38 N N
27 N C7 N C doub 1.3 N Y
28 N C8 N C sing 1.35 N Y
29 C5 C4 C C sing 1.53 N N
30 C5 O8 C O sing 1.44 N N
31 C6 C7 C C sing 1.51 N N
32 C6 O8 C O sing 1.44 N N
33 C14 O9 C O sing 1.43 N N
34 C14 C1 C C sing 1.53 N N
35 C9 C8 C C doub 1.41 N Y
36 C9 N2 C N sing 1.33 N Y
37 C7 N4 C N sing 1.36 N Y
38 C C1 C C sing 1.53 N N
39 C8 C11 C C sing 1.41 N Y
40 C4 O6 C O sing 1.43 N N
41 C2 C1 C C sing 1.53 N N
42 C1 C3 C C sing 1.53 N N
43 N2 C10 N C doub 1.32 N Y
44 O6 P1 O P sing 1.61 N N
45 N4 C11 N C sing 1.37 N Y
46 C11 N3 C N doub 1.33 N Y
47 O4 P1 O P doub 1.48 N N
48 C3 O C O sing 1.43 N N
49 C10 N3 C N sing 1.32 N Y
50 O P O P sing 1.61 N N
51 P1 O3 P O sing 1.61 N N
52 P1 O5 P O sing 1.61 N N
53 O3 P O P sing 1.61 N N
54 P O2 P O doub 1.48 N N
55 P O1 P O sing 1.61 N N
56 C27 H1 C H sing 1.08 N N
57 C26 H2 C H sing 1.08 N N
58 C25 H3 C H sing 1.08 N N
59 C24 H4 C H sing 1.08 N N
60 C23 H5 C H sing 1.08 N N
61 C20 H6 C H sing 1.09 N N
62 C20 H7 C H sing 1.09 N N
63 C19 H8 C H sing 1.09 N N
64 C19 H9 C H sing 1.09 N N
65 N6 H10 N H sing 0.97 N N
66 C17 H11 C H sing 1.09 N N
67 C17 H12 C H sing 1.09 N N
68 C16 H13 C H sing 1.09 N N
69 C16 H14 C H sing 1.09 N N
70 N5 H15 N H sing 0.97 N N
71 C14 H16 C H sing 1.09 N N
72 O9 H17 O H sing 0.97 N N
73 C H18 C H sing 1.09 N N
74 C H19 C H sing 1.09 N N
75 C H20 C H sing 1.09 N N
76 C2 H21 C H sing 1.09 N N
77 C2 H22 C H sing 1.09 N N
78 C2 H23 C H sing 1.09 N N
79 C3 H24 C H sing 1.09 N N
80 C3 H25 C H sing 1.09 N N
81 O1 H26 O H sing 0.97 N N
82 O5 H27 O H sing 0.97 N N
83 C4 H28 C H sing 1.09 N N
84 C4 H29 C H sing 1.09 N N
85 C5 H30 C H sing 1.09 N N
86 C13 H31 C H sing 1.09 N N
87 C12 H32 C H sing 1.09 N N
88 O7 H33 O H sing 0.97 N N
89 C6 H34 C H sing 1.09 N N
90 N4 H35 N H sing 0.97 N N
91 C10 H37 C H sing 1.08 N N
92 N1 H38 N H sing 0.97 N N
93 N1 H39 N H sing 0.97 N N
94 O14 H40 O H sing 0.97 N N