Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : 01P    

Bonds between two atoms of the molecule

Total Number of Bonds: 60


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C23 C C doub 1.38 N Y
2 C1 C24 C C sing 1.4 N Y
3 N1 C3 N C sing 1.47 N N
4 N1 C5 N C sing 1.47 N N
5 N1 C15 N C sing 1.4 N N
6 O1 C2 O C sing 1.43 N N
7 O1 C6 O C sing 1.43 N N
8 C2 C3 C C sing 1.53 N N
9 N2 C18 N C sing 1.4 N N
10 N2 C24 N C sing 1.39 N N
11 O2 C14 O C sing 1.36 N N
12 O2 C17 O C sing 1.43 N N
13 N3 C21 N C doub 1.34 N Y
14 N3 C22 N C sing 1.31 N Y
15 C4 N4 C N doub 1.32 N Y
16 C4 N5 C N sing 1.32 N Y
17 C4 N6 C N sing 1.38 N N
18 N4 C23 N C sing 1.33 N Y
19 C5 C6 C C sing 1.53 N N
20 N5 C24 N C doub 1.33 N Y
21 N6 C12 N C sing 1.4 N N
22 C7 C8 C C doub 1.36 N Y
23 C7 C20 C C sing 1.41 N Y
24 C8 C9 C C sing 1.39 N Y
25 C9 C10 C C doub 1.36 N Y
26 C10 C21 C C sing 1.41 N Y
27 C11 C12 C C doub 1.39 N Y
28 C11 C16 C C sing 1.38 N Y
29 C12 C13 C C sing 1.39 N Y
30 C13 C14 C C doub 1.38 N Y
31 C14 C15 C C sing 1.39 N Y
32 C15 C16 C C doub 1.39 N Y
33 C18 C19 C C sing 1.38 N Y
34 C18 C22 C C doub 1.4 N Y
35 C19 C20 C C doub 1.41 N Y
36 C20 C21 C C sing 1.42 N Y
37 C1 H1 C H sing 1.08 N N
38 C2 H2 C H sing 1.09 N N
39 C2 H2A C H sing 1.09 N N
40 N2 HN2 N H sing 0.97 N N
41 C3 H3 C H sing 1.09 N N
42 C3 H3A C H sing 1.09 N N
43 C5 H5 C H sing 1.09 N N
44 C5 H5A C H sing 1.09 N N
45 C6 H6 C H sing 1.09 N N
46 C6 H6A C H sing 1.09 N N
47 N6 HN6 N H sing 0.97 N N
48 C7 H7 C H sing 1.08 N N
49 C8 H8 C H sing 1.08 N N
50 C9 H9 C H sing 1.08 N N
51 C10 H10 C H sing 1.08 N N
52 C11 H11 C H sing 1.08 N N
53 C13 H13 C H sing 1.08 N N
54 C16 H16 C H sing 1.08 N N
55 C17 H17 C H sing 1.09 N N
56 C17 H17A C H sing 1.09 N N
57 C17 H17B C H sing 1.09 N N
58 C19 H19 C H sing 1.08 N N
59 C22 H22 C H sing 1.08 N N
60 C23 H23 C H sing 1.08 N N