Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : W9C

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 76


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O14 O O14 N N N -1 3.274 -1.658 -2.14
2 C5 C C5 N N N 0 2.401 -0.935 -1.691
3 O15 O O15 N N N 0 1.703 -0.28 -2.447
4 C1 C C1 R N N 0 2.18 -0.856 -0.204
5 C4 C C4 S N N 0 1.865 -2.22 0.488
6 C12 C C12 N N N 0 1.004 -1.861 1.722
7 C6 C C6 S N N 0 1.16 -0.299 1.796
8 C10 C C10 N N N 0 2.691 -0.148 2.049
9 C3 C C3 S N N 0 3.36 -0.259 0.648
10 C11 C C11 N N N 0 4.62 -1.102 0.641
11 O19 O O19 N N N 0 5.654 -0.639 0.223
12 C9 C C9 R N N 0 3.604 1.156 0.148
13 C18 C C18 N N N 0 4.774 1.91 0.807
14 C24 C C24 N N N 0 4.451 3.376 0.394
15 C22 C C22 R N N 0 2.9 3.451 0.315
16 C25 C C25 N N N 0 2.464 3.896 -1.078
17 C16 C C16 R N N 0 2.421 2.038 0.632
18 C7 C C7 N N N 0 1.177 1.512 -0.017
19 C2 C C2 S N N 0 0.989 0.029 0.28
20 C8 C C8 N N N 0 -0.371 -0.422 -0.27
21 O17 O O17 N N N 0 -1.357 0.567 0.03
22 C52 C C52 S N N 0 -2.667 0.244 -0.442
23 O56 O O56 N N N 0 -3.194 -0.842 0.323
24 C56 C C56 R N N 0 -4.497 -1.265 -0.085
25 C61 C C61 N N N 0 -4.457 -1.695 -1.553
26 C55 C C55 S N N 0 -5.483 -0.106 0.08
27 O64 O O64 N N N 0 -5.561 0.262 1.459
28 C65 C C65 N N N 0 -6.565 -0.442 2.193
29 C54 C C54 S N N 0 -4.996 1.091 -0.742
30 O60 O O60 N N N 0 -5.871 2.201 -0.535
31 C53 C C53 S N N 0 -3.58 1.464 -0.29
32 O57 O O57 N N N 0 -3.087 2.533 -1.1
33 C13 C C13 N N N 0 1.138 -3.18 -0.453
34 C20 C C20 N N N 0 1.681 -4.596 -0.255
35 C21 C C21 N N N 0 -0.36 -3.16 -0.143
36 H4 H H4 N N N 0 2.781 -2.713 0.83
37 H121 H H121 N N N 0 -0.027 -2.162 1.603
38 H122 H H122 N N N 0 1.429 -2.316 2.622
39 H101 H H101 N N N 0 2.94 0.768 2.558
40 H6 H H6 N N N 0 0.502 0.215 2.488
41 H102 H H102 N N N 0 3.031 -0.992 2.672
42 H11 H H11 N N N 0 4.593 -2.117 1.011
43 H9 H H9 N N N 0 3.72 1.193 -0.946
44 H181 H H181 N N N 0 4.751 1.795 1.886
45 H182 H H182 N N N 0 5.724 1.593 0.385
46 H241 H H241 N N N 0 4.82 4.068 1.149
47 H242 H H242 N N N 0 4.887 3.599 -0.577
48 H22 H H22 N N N 0 2.524 4.146 1.069
49 H251 H H251 N N N 0 2.847 3.195 -1.82
50 H252 H H252 N N N 0 1.376 3.92 -1.128
51 H253 H H253 N N N 0 2.859 4.892 -1.282
52 H16 H H16 N N N 0 2.305 1.984 1.717
53 H71 H H71 N N N 0 0.309 2.058 0.363
54 H72 H H72 N N N 0 1.222 1.639 -1.099
55 H81 H H81 N N N 0 -0.301 -0.549 -1.351
56 H82 H H82 N N N 0 -0.654 -1.368 0.19
57 H52 H H52 N N N 0 -2.615 -0.043 -1.492
58 H56 H H56 N N N 0 -4.816 -2.105 0.531
59 H611 H H611 N N N 0 -3.754 -2.52 -1.671
60 H612 H H612 N N N 0 -5.451 -2.018 -1.864
61 H613 H H613 N N N 0 -4.138 -0.855 -2.17
62 H55 H H55 N N N 0 -6.468 -0.413 -0.271
63 H651 H H651 N N N 0 -6.56 -0.106 3.23
64 H652 H H652 N N N 0 -7.543 -0.244 1.752
65 H653 H H653 N N N 0 -6.36 -1.512 2.156
66 H54 H H54 N N N 0 -4.985 0.827 -1.799
67 H60 H H60 N N N 0 -5.621 2.996 -1.027
68 H53 H H53 N N N 0 -3.601 1.776 0.754
69 H57 H H57 N N N 0 -2.191 2.817 -0.873
70 H13 H H13 N N N 0 1.3 -2.869 -1.485
71 H201 H H201 N N N 0 1.213 -5.268 -0.975
72 H202 H H202 N N N 0 2.76 -4.596 -0.407
73 H203 H H203 N N N 0 1.456 -4.934 0.757
74 H211 H H211 N N N 0 -0.83 -2.33 -0.672
75 H212 H H212 N N N 0 -0.811 -4.098 -0.466
76 H213 H H213 N N N 0 -0.508 -3.036 0.93