Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : TYQ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 27


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N N N N N N 0 1.439 1.013 1.608
2 CA C CA S N N 0 0.147 0.442 2.011
3 C C C N N N 0 0.187 0.092 3.476
4 O O O N N N 0 1.231 -0.228 3.992
5 CB C CB N N N 0 -0.131 -0.819 1.192
6 CG C CG N Y N 0 -0.171 -0.468 -0.272
7 CD1 C CD1 N Y N 0 -1.371 -0.105 -0.864
8 CD2 C CD2 N Y N 0 0.987 -0.514 -1.025
9 CE1 C CE1 N Y N 0 -1.41 0.223 -2.211
10 CE2 C CE2 N Y N 0 0.952 -0.191 -2.373
11 CZ C CZ N Y N 0 -0.251 0.178 -2.968
12 OZ O OZ N N N 0 -2.509 -0.062 -0.121
13 N5 N N5 N N N 0 2.127 -0.237 -3.136
14 OH O OH N N N 0 -0.289 0.495 -4.29
15 OXT O OXT N N Y 0 -0.936 0.135 4.208
16 H H H N N N 0 1.403 1.135 0.607
17 H2 H HN2 N N Y 0 2.137 0.306 1.789
18 HA H HA N N N 0 -0.643 1.172 1.834
19 HB2 H 1HB N N N 0 0.659 -1.548 1.369
20 HB3 H 2HB N N N 0 -1.09 -1.242 1.491
21 HD2 H HD2 N N N 0 1.92 -0.8 -0.563
22 HE1 H HE1 N N N 0 -2.345 0.509 -2.671
23 HZ H HOZ N N N 0 -2.914 -0.939 -0.18
24 HN51 H HN51 N N N 0 2.102 -0.011 -4.079
25 HN52 H HN52 N N N 0 2.965 -0.495 -2.722
26 HH H HH N N N 0 -0.466 -0.325 -4.769
27 HXT H HXT N N Y 0 -0.911 -0.089 5.148