Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : SLQ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 61


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N Y N 0 -2.023 -0.779 0.071
2 O1 O O1 N N N 0 -4.059 -3.975 -2.009
3 C2 C C2 N Y N 0 -3.35 -0.791 0.077
4 N2 N N2 N N N 0 -4.007 -2.01 0.115
5 N3 N N3 N Y N 0 -4.067 0.32 0.048
6 C4 C C4 N Y N 0 -3.471 1.508 0.012
7 C5 C C5 N Y N 0 -2.068 1.57 0.004
8 C6 C C6 N Y N 0 -1.347 0.364 0.036
9 N6 N N6 N N N 0 0.036 0.367 0.03
10 N7 N N7 N Y N 0 -1.726 2.882 -0.036
11 C8 C C8 N Y N 0 -2.804 3.61 -0.052
12 C9 C C9 N N N 0 -5.304 3.254 -0.032
13 N9 N N9 N Y N 0 -3.908 2.808 -0.024
14 C1' C C1' N Y N 0 2.253 -0.621 0.05
15 C10 C C10 N N N 0 -5.565 4.132 1.193
16 C11 C C11 N N N 0 -5.575 4.06 -1.304
17 C12 C C12 S N N 0 -3.238 -3.257 0.148
18 C13 C C13 N N N 0 -4.081 -4.359 0.793
19 C14 C C14 N N N 0 -4.344 -4.007 2.259
20 C15 C C15 N N N 0 -2.869 -3.666 -1.28
21 C1B C C1B N Y N 0 6.434 0.148 0.012
22 N1B N N1B N Y N 0 7.085 0.303 1.157
23 C2' C C2' N Y N 0 2.934 -0.459 1.243
24 C2B C C2B N Y N 0 7.111 0.229 -1.204
25 C3' C C3' N Y N 0 4.292 -0.21 1.236
26 C3B C C3B N Y N 0 8.473 0.474 -1.2
27 C4' C C4' N Y N 0 4.975 -0.121 0.025
28 C4B C C4B N Y N 0 9.115 0.63 0.021
29 C5' C C5' N Y N 0 4.283 -0.285 -1.173
30 C5B C C5B N Y N 0 8.381 0.537 1.189
31 C6' C C6' N Y N 0 2.926 -0.534 -1.155
32 CA' C CA' N N N 0 0.771 -0.9 0.064
33 HO1 H HO1 N N N 0 -3.9 -4.243 -2.924
34 HN2 H HN2 N N N 0 -4.977 -2.038 0.12
35 HN6 H HN6 N N N 0 0.519 1.208 0.004
36 H8 H H8 N N N 0 -2.823 4.689 -0.083
37 H9 H H9 N N N 0 -5.963 2.386 -0.004
38 H10 H H10 N N N 0 -5.372 3.558 2.099
39 H10A H H10A N N N 0 -4.906 5.0 1.166
40 H10B H H10B N N N 0 -6.604 4.464 1.188
41 H11 H H11 N N N 0 -5.388 3.434 -2.177
42 H11A H H11A N N N 0 -6.613 4.391 -1.31
43 H11B H H11B N N N 0 -4.916 4.928 -1.332
44 H12 H H12 N N N 0 -2.329 -3.107 0.729
45 H13 H H13 N N N 0 -5.029 -4.448 0.264
46 H13A H H13A N N N 0 -3.544 -5.306 0.738
47 H14 H H14 N N N 0 -4.944 -4.793 2.718
48 H14A H H14A N N N 0 -3.395 -3.918 2.787
49 H14B H H14B N N N 0 -4.881 -3.06 2.314
50 H15 H H15 N N N 0 -2.223 -4.543 -1.25
51 H15A H H15A N N N 0 -2.346 -2.845 -1.769
52 H2' H H2' N N N 0 2.403 -0.528 2.181
53 H2B H H2B N N N 0 6.58 0.102 -2.135
54 H3' H H3' N N N 0 4.823 -0.083 2.168
55 H3B H H3B N N N 0 9.024 0.543 -2.126
56 H4B H H4B N N N 0 10.177 0.822 0.058
57 H5' H H5' N N N 0 4.808 -0.217 -2.115
58 H5B H H5B N N N 0 8.878 0.658 2.141
59 H6' H H6' N N N 0 2.389 -0.661 -2.083
60 HA' H HA' N N N 0 0.513 -1.446 0.971
61 HA'A H HA'A N N N 0 0.506 -1.497 -0.808