Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : SLB

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 40


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 -2.642 0.326 -2.184
2 C2 C C2 S N N 0 -1.824 -0.192 -1.03
3 C3 C C3 N N N 0 -2.52 0.158 0.286
4 C4 C C4 S N N 0 -1.696 -0.402 1.451
5 C5 C C5 R N N 0 -0.255 0.102 1.32
6 C6 C C6 R N N 0 0.27 -0.243 -0.075
7 C7 C C7 R N N 0 1.72 0.229 -0.204
8 C8 C C8 R N N 0 2.249 -0.124 -1.596
9 C9 C C9 N N N 0 3.699 0.347 -1.725
10 C10 C C10 N N N 0 0.737 0.029 3.544
11 C11 C C11 N N N 0 1.6 -0.634 4.586
12 O2 O O2 N N Y 0 -1.699 -1.612 -1.138
13 N5 N N5 N N N 0 0.583 -0.542 2.333
14 O1A O O1A N N N 0 -2.164 1.128 -2.952
15 O1B O O1B N N N 0 -3.903 -0.1 -2.359
16 O4 O O4 N N N 0 -2.249 0.043 2.691
17 O6 O O6 N N N 0 -0.527 0.401 -1.065
18 O7 O O7 N N N 0 1.779 1.644 -0.018
19 O8 O O8 N N N 0 2.19 -1.539 -1.782
20 O9 O O9 N N N 0 4.193 0.017 -3.025
21 O10 O O10 N N N 0 0.181 1.077 3.794
22 H32 H H31 N N N 0 -3.517 -0.281 0.299
23 H31 H H32 N N N 0 -2.596 1.241 0.38
24 H4 H H4 N N N 0 -1.707 -1.491 1.416
25 H5 H H5 N N N 0 -0.232 1.182 1.461
26 H6 H H6 N N N 0 0.227 -1.322 -0.219
27 H7 H H7 N N N 0 2.331 -0.262 0.552
28 H8 H H8 N N N 0 1.638 0.367 -2.352
29 H92 H H91 N N N 0 3.743 1.427 -1.583
30 H91 H H92 N N N 0 4.31 -0.144 -0.969
31 H111 H H111 N N N 0 1.603 -0.029 5.493
32 H113 H H112 N N N 0 1.202 -1.623 4.811
33 H112 H H113 N N N 0 2.618 -0.728 4.209
34 HN5 H HN5 N N N 0 1.028 -1.381 2.133
35 HO1B H HOB1 N N N 0 -4.428 0.233 -3.099
36 HO2 H HO2 N N Y 0 -1.256 -1.791 -1.979
37 HO4 H HO4 N N Y 0 -3.154 -0.295 2.731
38 HO7 H HO7 N N Y 0 1.226 2.04 -0.705
39 HO8 H HO8 N N Y 0 2.743 -1.935 -1.094
40 HO9 H HO9 N N Y 0 5.106 0.331 -3.065