data_SLB
#
_chem_comp.id SLB
_chem_comp.name "N-acetyl-beta-neuraminic acid"
_chem_comp.type "D-saccharide, beta linking"
_chem_comp.pdbx_type ATOMS
_chem_comp.formula "C11 H19 N O9"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms
"N-acetylneuraminic acid; sialic acid; O-sialic acid; 5-N-ACETYL-BETA-D-NEURAMINIC ACID; BETA-SIALIC ACID"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2001-04-20
_chem_comp.pdbx_modified_date 2020-07-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 309.270
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code SLB
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1FV3
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1 SLB "N-acetylneuraminic acid" PDB ?
2 SLB "sialic acid" PDB ?
3 SLB "O-sialic acid" PDB ?
4 SLB "5-N-ACETYL-BETA-D-NEURAMINIC ACID" PDB ?
5 SLB "BETA-SIALIC ACID" PDB ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SLB C1 C1 C 0 1 N N N N N N -1.415 -7.615 1.240 -2.642 0.326 -2.184 C1 SLB 1
SLB C2 C2 C 0 1 N N S N N N -1.067 -8.092 -0.114 -1.824 -0.192 -1.030 C2 SLB 2
SLB C3 C3 C 0 1 N N N N N N -2.182 -8.825 -0.826 -2.520 0.158 0.286 C3 SLB 3
SLB C4 C4 C 0 1 N N S N N N -1.609 -9.506 -2.067 -1.696 -0.402 1.451 C4 SLB 4
SLB C5 C5 C 0 1 N N R N N N -0.446 -10.456 -1.717 -0.255 0.102 1.320 C5 SLB 5
SLB C6 C6 C 0 1 N N R N N N 0.586 -9.652 -0.934 0.270 -0.243 -0.075 C6 SLB 6
SLB C7 C7 C 0 1 N N R N N N 1.646 -10.569 -0.369 1.720 0.229 -0.204 C7 SLB 7
SLB C8 C8 C 0 1 N N R N N N 2.799 -9.681 0.086 2.249 -0.124 -1.596 C8 SLB 8
SLB C9 C9 C 0 1 N N N N N N 2.748 -9.247 1.538 3.699 0.347 -1.725 C9 SLB 9
SLB C10 C10 C 0 1 N N N N N N -0.144 -12.346 -3.027 0.737 0.029 3.544 C10 SLB 10
SLB C11 C11 C 0 1 N N N N N N -0.667 -12.723 -4.375 1.600 -0.634 4.586 C11 SLB 11
SLB N5 N5 N 0 1 N N N N N N 0.307 -11.137 -2.796 0.583 -0.542 2.333 N5 SLB 12
SLB O1A O1A O 0 1 N N N N N N -2.463 -7.036 1.439 -2.164 1.128 -2.952 O1A SLB 13
SLB O1B O1B O 0 1 N N N N N N -0.586 -7.784 2.116 -3.903 -0.100 -2.359 O1B SLB 14
SLB O2 O2 O 0 1 N Y N N N N -0.749 -6.907 -0.831 -1.699 -1.612 -1.138 O2 SLB 15
SLB O4 O4 O 0 1 N N N N N N -2.727 -10.133 -2.633 -2.249 0.043 2.691 O4 SLB 16
SLB O6 O6 O 0 1 N N N N N N 0.035 -8.939 0.151 -0.527 0.401 -1.065 O6 SLB 17
SLB O7 O7 O 0 1 N N N N N N 1.117 -11.343 0.691 1.779 1.644 -0.018 O7 SLB 18
SLB O8 O8 O 0 1 N N N N N N 4.064 -10.298 -0.003 2.190 -1.539 -1.782 O8 SLB 19
SLB O9 O9 O 0 1 N N N N N N 1.868 -8.157 1.696 4.193 0.017 -3.025 O9 SLB 20
SLB O10 O10 O 0 1 N N N N N N -0.268 -13.103 -2.100 0.181 1.077 3.794 O10 SLB 21
SLB H32 H31 H 0 1 N N N N N N -2.717 -9.538 -0.157 -3.517 -0.281 0.299 H32 SLB 22
SLB H31 H32 H 0 1 N N N N N N -3.044 -8.160 -1.064 -2.596 1.241 0.380 H31 SLB 23
SLB H4 H4 H 0 1 N N N N N N -1.132 -8.803 -2.790 -1.707 -1.491 1.416 H4 SLB 24
SLB H5 H5 H 0 1 N N N N N N -0.967 -11.283 -1.182 -0.232 1.182 1.461 H5 SLB 25
SLB H6 H6 H 0 1 N N N N N N 1.010 -8.923 -1.663 0.227 -1.322 -0.219 H6 SLB 26
SLB H7 H7 H 0 1 N N N N N N 2.007 -11.296 -1.132 2.331 -0.262 0.552 H7 SLB 27
SLB H8 H8 H 0 1 N N N N N N 2.673 -8.821 -0.612 1.638 0.367 -2.352 H8 SLB 28
SLB H92 H91 H 0 1 N N N N N N 2.485 -10.093 2.214 3.743 1.427 -1.583 H92 SLB 29
SLB H91 H92 H 0 1 N N N N N N 3.763 -9.021 1.939 4.310 -0.144 -0.969 H91 SLB 30
SLB H111 H111 H 0 0 N N N N N N -1.050 -13.751 -4.571 1.603 -0.029 5.493 H111 SLB 31
SLB H113 H112 H 0 0 N N N N N N -1.464 -11.995 -4.654 1.202 -1.623 4.811 H113 SLB 32
SLB H112 H113 H 0 0 N N N N N N 0.121 -12.496 -5.129 2.618 -0.728 4.209 H112 SLB 33
SLB HN5 HN5 H 0 1 N N N N N N 1.092 -10.792 -3.348 1.028 -1.381 2.133 HN5 SLB 34
SLB HO1B HOB1 H 0 0 N N N N N N -0.809 -7.477 2.986 -4.428 0.233 -3.099 HO1B SLB 35
SLB HO2 HO2 H 0 1 N Y N N N N -0.525 -7.213 -1.701 -1.256 -1.791 -1.979 HO2 SLB 36
SLB HO4 HO4 H 0 1 N Y N N N N -2.370 -10.556 -3.405 -3.154 -0.295 2.731 HO4 SLB 37
SLB HO7 HO7 H 0 1 N Y N N N N 1.783 -11.919 1.046 1.226 2.040 -0.705 HO7 SLB 38
SLB HO8 HO8 H 0 1 N Y N N N N 4.782 -9.744 0.280 2.743 -1.935 -1.094 HO8 SLB 39
SLB HO9 HO9 H 0 1 N Y N N N N 1.836 -7.885 2.605 5.106 0.331 -3.065 HO9 SLB 40
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SLB C1 C2 SING N N 1
SLB C1 O1A DOUB N N 2
SLB C1 O1B SING N N 3
SLB C2 C3 SING N N 4
SLB C2 O2 SING N N 5
SLB C2 O6 SING N N 6
SLB C3 C4 SING N N 7
SLB C3 H32 SING N N 8
SLB C3 H31 SING N N 9
SLB C4 C5 SING N N 10
SLB C4 O4 SING N N 11
SLB C4 H4 SING N N 12
SLB C5 C6 SING N N 13
SLB C5 N5 SING N N 14
SLB C5 H5 SING N N 15
SLB C6 C7 SING N N 16
SLB C6 O6 SING N N 17
SLB C6 H6 SING N N 18
SLB C7 C8 SING N N 19
SLB C7 O7 SING N N 20
SLB C7 H7 SING N N 21
SLB C8 C9 SING N N 22
SLB C8 O8 SING N N 23
SLB C8 H8 SING N N 24
SLB C9 O9 SING N N 25
SLB C9 H92 SING N N 26
SLB C9 H91 SING N N 27
SLB C10 C11 SING N N 28
SLB C10 N5 SING N N 29
SLB C10 O10 DOUB N N 30
SLB C11 H111 SING N N 31
SLB C11 H113 SING N N 32
SLB C11 H112 SING N N 33
SLB N5 HN5 SING N N 34
SLB O1B HO1B SING N N 35
SLB O2 HO2 SING N N 36
SLB O4 HO4 SING N N 37
SLB O7 HO7 SING N N 38
SLB O8 HO8 SING N N 39
SLB O9 HO9 SING N N 40
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SLB SMILES ACDLabs 10.04 O=C(O)C1(O)OC(C(O)C(O)CO)C(NC(=O)C)C(O)C1
SLB SMILES_CANONICAL CACTVS 3.341 CC(=O)N[C@@H]1[C@@H](O)C[C@](O)(O[C@H]1[C@H](O)[C@H](O)CO)C(O)=O
SLB SMILES CACTVS 3.341 CC(=O)N[CH]1[CH](O)C[C](O)(O[CH]1[CH](O)[CH](O)CO)C(O)=O
SLB SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CC(=O)N[C@@H]1[C@H](C[C@](O[C@H]1[C@@H]([C@@H](CO)O)O)(C(=O)O)O)O
SLB SMILES "OpenEye OEToolkits" 1.5.0 CC(=O)NC1C(CC(OC1C(C(CO)O)O)(C(=O)O)O)O
SLB InChI InChI 1.03 InChI=1S/C11H19NO9/c1-4(14)12-7-5(15)2-11(20,10(18)19)21-9(7)8(17)6(16)3-13/h5-9,13,15-17,20H,2-3H2,1H3,(H,12,14)(H,18,19)/t5-,6+,7+,8+,9+,11-/m0/s1
SLB InChIKey InChI 1.03 SQVRNKJHWKZAKO-PFQGKNLYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
SLB "SYSTEMATIC NAME" ACDLabs 10.04 "5-(acetylamino)-3,5-dideoxy-D-glycero-beta-D-galacto-non-2-ulopyranosonic acid"
SLB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S,4S,5R,6R)-5-acetamido-2,4-dihydroxy-6-[(1R,2R)-1,2,3-trihydroxypropyl]oxane-2-carboxylic acid"
SLB "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML 1.0 DNeup5Acb
SLB "COMMON NAME" GMML 1.0 "N-acetyl-b-D-neuraminic acid"
SLB "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 b-D-Neup5Ac
SLB "SNFG CARBOHYDRATE SYMBOL" GMML 1.0 Neu5Ac
#
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
SLB "CARBOHYDRATE ISOMER" D PDB ?
SLB "CARBOHYDRATE RING" pyranose PDB ?
SLB "CARBOHYDRATE ANOMER" beta PDB ?
SLB "CARBOHYDRATE PRIMARY CARBONYL GROUP" ketose PDB ?
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SLB 'Create component' 2001-04-20 RCSB
SLB 'Modify descriptor' 2011-06-04 RCSB
SLB 'Other modification' 2019-08-12 RCSB
SLB 'Other modification' 2019-12-19 RCSB
SLB 'Other modification' 2020-07-03 RCSB
SLB 'Modify name' 2020-07-17 RCSB
SLB 'Modify synonyms' 2020-07-17 RCSB
SLB 'Modify atom id' 2020-07-17 RCSB
SLB 'Modify component atom id' 2020-07-17 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id SLB
_pdbe_chem_comp_drugbank_details.drugbank_id DB04265
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name 'N-acetyl-beta-neuraminic acid'
_pdbe_chem_comp_drugbank_details.description
'An N-acyl derivative of neuraminic acid. N-acetylneuraminic acid occurs in many polysaccharides, glycoproteins, and glycolipids in animals and bacteria. (From Dorland, 28th ed, p1518)'
_pdbe_chem_comp_drugbank_details.cas_number 19342-33-7
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
SLB 'N-acetylneuraminic acid' wwPDB ?
SLB 'sialic acid' wwPDB ?
SLB 'O-sialic acid' wwPDB ?
SLB '5-N-ACETYL-BETA-D-NEURAMINIC ACID' wwPDB ?
SLB 'BETA-SIALIC ACID' wwPDB ?
SLB '(-)-N-acetyl-beta-neuraminic acid' DrugBank ?
SLB 'beta-sialic acid' DrugBank ?
SLB 'N-acetyl-beta-D-neuraminic acid' DrugBank ?
SLB 'N-acetyl-beta-neuraminic acid' DrugBank ?
SLB 'N-acetyl-β-neuraminic acid' DrugBank ?
SLB 'β-Neu5Ac' DrugBank ?
#
_pdbe_chem_comp_drugbank_classification.comp_id SLB
_pdbe_chem_comp_drugbank_classification.drugbank_id DB04265
_pdbe_chem_comp_drugbank_classification.parent 'N-acylneuraminic acids'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Organooxygen compounds'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic oxygen compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as n-acylneuraminic acids. These are neuraminic acids carrying an N-acyl substituent.'
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
SLB DB04265 'Tetanus toxin' 'Clostridium tetani (strain Massachusetts / E88)' P04958 unknown 1
SLB DB04265 Sialidase 'Micromonospora viridifaciens' Q02834 unknown 2
SLB DB04265 'Tail spike protein' 'Enterobacteria phage K1F' Q04830 unknown 3
SLB DB04265 Hemagglutinin-neuraminidase HPIV-3 P12564 unknown 4
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
SLB C1 C 5.654 -3.375 1
SLB C2 C 6.404 -2.076 2
SLB C3 C 5.104 -1.326 3
SLB C4 C 5.104 0.174 4
SLB C5 C 6.404 0.924 5
SLB C6 C 7.702 0.174 6
SLB C7 C 9.002 0.924 7
SLB C8 C 10.301 0.174 8
SLB C9 C 11.600 0.924 9
SLB C10 C 5.104 3.174 10
SLB C11 C 3.805 2.424 11
SLB N5 N 6.404 2.424 12
SLB O1A O 4.154 -3.375 13
SLB O1B O 6.404 -4.674 14
SLB O2 O 7.154 -3.375 15
SLB O4 O 3.805 0.924 16
SLB O6 O 7.702 -1.326 17
SLB O7 O 9.002 2.424 18
SLB O8 O 10.301 -1.326 19
SLB O9 O 12.899 0.174 20
SLB O10 O 5.104 4.674 21
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
SLB C1 C2 SINGLE NONE 1
SLB C1 O1A DOUBLE NONE 2
SLB C1 O1B SINGLE NONE 3
SLB C2 C3 SINGLE NONE 4
SLB C2 O2 SINGLE BEGINWEDGE 5
SLB C2 O6 SINGLE NONE 6
SLB C3 C4 SINGLE NONE 7
SLB C4 C5 SINGLE NONE 8
SLB C4 O4 SINGLE BEGINDASH 9
SLB C5 C6 SINGLE NONE 10
SLB C5 N5 SINGLE BEGINWEDGE 11
SLB C6 C7 SINGLE NONE 12
SLB C6 O6 SINGLE BEGINDASH 13
SLB C7 C8 SINGLE NONE 14
SLB C7 O7 SINGLE BEGINDASH 15
SLB C8 C9 SINGLE NONE 16
SLB C8 O8 SINGLE BEGINWEDGE 17
SLB C9 O9 SINGLE NONE 18
SLB C10 C11 SINGLE NONE 19
SLB C10 N5 SINGLE NONE 20
SLB C10 O10 DOUBLE NONE 21
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
SLB MurckoScaffold S1 scaffold C1CCOCC1 InChI=1S/C5H10O/c1-2-4-6-5-3-1/h1-5H2 DHXVGJBLRPWPCS-UHFFFAOYSA-N
SLB amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
SLB pyranose F2 fragment OC1CCCCO1 InChI=1S/C5H10O2/c6-5-3-1-2-4-7-5/h5-6H,1-4H2 CELWCAITJAEQNL-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
SLB C2 S1 1
SLB C3 S1 1
SLB C4 S1 1
SLB C5 S1 1
SLB C6 S1 1
SLB O6 S1 1
SLB N5 F1 1
SLB C10 F1 1
SLB O10 F1 1
SLB C11 F1 1
SLB C5 F2 1
SLB C6 F2 1
SLB O6 F2 1
SLB C2 F2 1
SLB C3 F2 1
SLB C4 F2 1
SLB O2 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id SLB
_pdbe_chem_comp_rdkit_properties.exactmw 309.106
_pdbe_chem_comp_rdkit_properties.amw 309.271
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 10
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 7
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 11
_pdbe_chem_comp_rdkit_properties.NumHBD 7
_pdbe_chem_comp_rdkit_properties.NumHBA 9
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 21
_pdbe_chem_comp_rdkit_properties.NumAtoms 40
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.818
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 6
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 146.407
_pdbe_chem_comp_rdkit_properties.tpsa 176.780
_pdbe_chem_comp_rdkit_properties.CrippenClogP -3.872
_pdbe_chem_comp_rdkit_properties.CrippenMR 64.787
_pdbe_chem_comp_rdkit_properties.chi0v 9.621
_pdbe_chem_comp_rdkit_properties.chi1v 4.738
_pdbe_chem_comp_rdkit_properties.chi2v 1.941
_pdbe_chem_comp_rdkit_properties.chi3v 1.941
_pdbe_chem_comp_rdkit_properties.chi4v 1.128
_pdbe_chem_comp_rdkit_properties.chi0n 28.621
_pdbe_chem_comp_rdkit_properties.chi1n 13.635
_pdbe_chem_comp_rdkit_properties.chi2n 1.941
_pdbe_chem_comp_rdkit_properties.chi3n 1.941
_pdbe_chem_comp_rdkit_properties.chi4n 1.128
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.300
_pdbe_chem_comp_rdkit_properties.kappa1 4.600
_pdbe_chem_comp_rdkit_properties.kappa2 6.642
_pdbe_chem_comp_rdkit_properties.kappa3 3.872
_pdbe_chem_comp_rdkit_properties.Phi 1.455
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
SLB UniChem DrugBank DB04265
SLB UniChem 'PubChem DOTF' 136349998
SLB UniChem ChEBI 45744
SLB UniChem ZINC ZINC000003793840
SLB UniChem eMolecules 29543565
SLB UniChem fdasrs TIP79W5HPN
SLB UniChem HMDB HMDB0000230
SLB UniChem NMRShiftDB 60018863
SLB UniChem ACTor 1904-24-1
SLB UniChem BindingDb 50063302
SLB UniChem 'EPA CompTox Dashboard' DTXSID80864309
SLB UniChem MetaboLights MTBLC45744
SLB UniChem BRENDA 1166
SLB UniChem BRENDA 163401
SLB UniChem BRENDA 173195
SLB UniChem BRENDA 173833
SLB UniChem BRENDA 22978
SLB UniChem BRENDA 24535
SLB UniChem BRENDA 2917
SLB UniChem BRENDA 36637
SLB UniChem BRENDA 5774
SLB UniChem BRENDA 730
SLB UniChem BRENDA 84246
SLB UniChem BRENDA 899
SLB UniChem ChemicalBook CB6713403
SLB UniChem 'Probes And Drugs' PD000078
SLB UniChem CCDC SIALAC
SLB UniChem eMolecules 30152347
SLB UniChem eMolecules 713382
SLB UniChem SureChEMBL SCHEMBL22412
SLB UniChem 'PubChem TPHARMA' 14776496
SLB UniChem PubChem 445063
SLB UniChem ACTor 126934-33-6
SLB UniChem Nikkaji J566.854I
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loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
SLB C1 -1.963 -3.190 0.233 ETKDGv3 1
SLB C2 -1.604 -1.868 0.864 ETKDGv3 2
SLB C3 -2.582 -0.774 0.335 ETKDGv3 3
SLB C4 -1.943 0.051 -0.787 ETKDGv3 4
SLB C5 -0.610 0.678 -0.305 ETKDGv3 5
SLB C6 0.082 -0.222 0.765 ETKDGv3 6
SLB C7 1.627 -0.060 0.832 ETKDGv3 7
SLB C8 2.403 -0.485 -0.453 ETKDGv3 8
SLB C9 3.926 -0.423 -0.229 ETKDGv3 9
SLB C10 -0.735 3.214 -0.521 ETKDGv3 10
SLB C11 -1.097 4.530 0.085 ETKDGv3 11
SLB N5 -0.868 2.012 0.251 ETKDGv3 12
SLB O1A -2.916 -3.875 0.695 ETKDGv3 13
SLB O1B -1.276 -3.637 -0.893 ETKDGv3 14
SLB O2 -1.750 -1.975 2.261 ETKDGv3 15
SLB O4 -1.718 -0.779 -1.898 ETKDGv3 16
SLB O6 -0.242 -1.584 0.543 ETKDGv3 17
SLB O7 1.962 1.251 1.219 ETKDGv3 18
SLB O8 2.029 -1.774 -0.873 ETKDGv3 19
SLB O9 4.609 -0.750 -1.410 ETKDGv3 20
SLB O10 -0.343 3.167 -1.718 ETKDGv3 21
SLB H32 -3.541 -1.213 -0.021 ETKDGv3 22
SLB H31 -2.847 -0.080 1.164 ETKDGv3 23
SLB H4 -2.660 0.856 -1.075 ETKDGv3 24
SLB H5 0.050 0.774 -1.189 ETKDGv3 25
SLB H6 -0.286 0.075 1.777 ETKDGv3 26
SLB H7 1.969 -0.730 1.652 ETKDGv3 27
SLB H8 2.173 0.220 -1.277 ETKDGv3 28
SLB H92 4.218 0.608 0.063 ETKDGv3 29
SLB H91 4.230 -1.105 0.600 ETKDGv3 30
SLB H111 -0.747 5.365 -0.559 ETKDGv3 31
SLB H113 -2.199 4.595 0.197 ETKDGv3 32
SLB H112 -0.621 4.626 1.083 ETKDGv3 33
SLB HN5 -1.309 2.085 1.197 ETKDGv3 34
SLB HO1B -1.520 -4.514 -1.337 ETKDGv3 35
SLB HO2 -1.033 -2.582 2.587 ETKDGv3 36
SLB HO4 -1.598 -0.183 -2.683 ETKDGv3 37
SLB HO7 1.826 1.843 0.435 ETKDGv3 38
SLB HO8 2.270 -2.407 -0.147 ETKDGv3 39
SLB HO9 4.635 -1.741 -1.461 ETKDGv3 40
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