Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : S7E

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 75


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C18 C C1 N Y N 0 5.103 0.77 0.038
2 C21 C C2 N Y N 0 8.181 -3.543 0.09
3 C22 C C3 N N N 0 -7.797 -6.129 -0.396
4 C30 C C7 N N N 0 -7.586 3.078 -0.017
5 C26 C C4 N N N 0 -7.181 0.008 -0.104
6 C27 C C5 N Y N 0 -4.155 1.937 -0.067
7 C29 C C6 N Y N 0 -5.065 2.95 -0.034
8 C31 C C8 N Y N 0 -6.114 1.023 -0.082
9 C32 C C9 N N N 0 -2.214 3.316 -0.034
10 C34 C C10 N Y N 0 1.361 3.001 -0.047
11 C35 C C11 N Y N 0 1.257 4.358 -0.012
12 C36 C C12 N N N 0 -0.663 5.996 0.033
13 C37 C C13 N Y N 0 -0.749 3.47 -0.032
14 C38 C C14 N N N 0 3.741 2.909 -0.041
15 C39 C C15 N Y N 0 6.468 0.469 0.154
16 C40 C C16 N Y N 0 7.146 1.644 0.24
17 C41 C C17 N N N 0 6.587 4.093 0.242
18 C42 C C18 N Y N 0 4.988 2.144 0.058
19 C43 C C19 N N N 0 6.242 -1.905 0.082
20 C44 C C20 N Y N 0 6.838 -3.242 -0.008
21 C45 C C21 N Y N 0 8.304 -4.931 -0.059
22 C46 C C22 N Y N 0 7.058 -5.442 -0.236
23 C47 C C23 N N N 0 4.708 -4.557 -0.361
24 C49 C C24 S N N 0 -8.408 -4.762 -0.23
25 C50 C C25 N N N 0 -7.3 -3.707 -0.207
26 C51 C C26 N N N 0 -7.925 -2.311 -0.164
27 N15 N N4 N Y N 0 -0.071 4.656 -0.002
28 N12 N N1 N N N 0 -6.864 -1.301 -0.142
29 N13 N N2 N Y N 0 -6.3 2.376 -0.043
30 N14 N N3 N N N 0 -2.761 2.084 -0.065
31 N16 N N5 N N N 0 2.556 2.267 -0.062
32 N17 N N6 N Y N 0 6.254 2.668 0.182
33 N19 N N7 N N N 0 7.034 -0.819 0.177
34 N20 N N8 N Y N 0 6.159 -4.422 -0.207
35 N22 N N9 N N N 0 9.505 -5.665 -0.029
36 N23 N N10 N N N 0 -9.158 -4.711 1.032
37 N28 N N11 N Y N 0 -4.819 0.781 -0.096
38 N33 N N12 N Y N 0 0.129 2.489 -0.059
39 O4 O O1 N N N 0 -7.968 -6.974 0.45
40 O5 O O2 N N N 0 -8.347 0.351 -0.087
41 O6 O O3 N N N 0 -2.929 4.299 -0.007
42 O7 O O4 N N N 0 3.776 4.124 -0.105
43 O8 O O5 N N N 0 5.031 -1.777 0.072
44 H1 H H1 N N N 0 4.295 0.059 -0.053
45 H2 H H2 N N N 0 8.986 -2.84 0.247
46 H3 H H3 N N N 0 -7.205 -6.354 -1.271
47 H4 H H4 N N N 0 -4.849 4.008 -0.005
48 H5 H H5 N N N 0 -7.91 3.281 -1.037
49 H6 H H6 N N N 0 -8.328 2.456 0.484
50 H7 H H7 N N N 0 -7.476 4.018 0.523
51 H8 H H8 N N N 0 2.074 5.064 0.006
52 H9 H H9 N N N 0 -0.81 6.355 -0.986
53 H10 H H10 N N N 0 -1.623 5.956 0.547
54 H11 H H11 N N N 0 0.005 6.674 0.564
55 H12 H H12 N N N 0 8.216 1.746 0.338
56 H13 H H13 N N N 0 6.671 4.489 -0.77
57 H14 H H14 N N N 0 5.801 4.627 0.777
58 H15 H H15 N N N 0 7.535 4.224 0.764
59 H16 H H16 N N N 0 6.82 -6.486 -0.377
60 H17 H H17 N N N 0 4.242 -4.615 0.622
61 H18 H H18 N N N 0 4.318 -3.693 -0.898
62 H19 H H19 N N N 0 4.486 -5.464 -0.923
63 H20 H H20 N N N 0 -9.083 -4.562 -1.062
64 H21 H H21 N N N 0 -6.677 -3.853 0.675
65 H22 H H22 N N N 0 -6.688 -3.804 -1.104
66 H23 H H23 N N N 0 -8.548 -2.165 -1.047
67 H24 H H24 N N N 0 -8.537 -2.215 0.733
68 H25 H H25 N N N 0 -5.934 -1.575 -0.156
69 H26 H H26 N N N 0 -2.191 1.3 -0.087
70 H27 H H27 N N N 0 2.53 1.298 -0.088
71 H28 H H28 N N N 0 7.994 -0.925 0.261
72 H29 H H29 N N N 0 10.35 -5.207 0.104
73 H30 H H30 N N N 0 9.488 -6.628 -0.142
74 H31 H H31 N N N 0 -8.554 -4.893 1.819
75 H32 H H32 N N N 0 -9.631 -3.826 1.136