Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : RIX

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 24


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C01 C C1 N N N 0 5.462 -0.522 0.006
2 C03 C C2 N N N 0 3.091 -0.257 0.0
3 C05 C C3 N N N 0 1.846 0.567 -0.003
4 C08 C C4 N Y N 0 0.433 -1.392 -0.006
5 C09 C C5 N Y N 0 -0.882 -1.653 -0.004
6 C10 C C6 N Y N 0 -1.579 -0.362 -0.002
7 C11 C C7 N Y N 0 -2.924 0.012 0.002
8 C12 C C8 N Y N 0 -3.26 1.349 0.003
9 C13 C C9 N Y N 0 -2.27 2.32 0.002
10 C14 C C10 N Y N 0 -0.937 1.965 -0.002
11 C15 C C11 N Y N 0 -0.577 0.623 -0.003
12 N07 N N1 N Y N 0 0.64 -0.034 -0.006
13 O02 O O1 N N N 0 4.295 0.343 0.004
14 O04 O O2 N N N 0 3.016 -1.468 0.0
15 O06 O O3 N N N 0 1.921 1.778 -0.002
16 CL16 CL CL1 N N N 0 -4.167 -1.2 0.003
17 H1 H H1 N N N 0 6.366 0.088 0.009
18 H2 H H2 N N N 0 5.446 -1.151 0.896
19 H3 H H3 N N N 0 5.451 -1.151 -0.884
20 H4 H H4 N N N 0 1.213 -2.138 -0.004
21 H5 H H5 N N N 0 -1.342 -2.63 -0.004
22 H6 H H6 N N N 0 -4.299 1.642 0.006
23 H7 H H7 N N N 0 -2.545 3.365 0.003
24 H8 H H8 N N N 0 -0.174 2.729 -0.004