Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : RA1

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 33


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 CL CL CL1 N N N 0 2.568 -2.602 0.239
2 C10 C C1 N Y N 0 3.178 -0.983 0.1
3 C9 C C2 N Y N 0 4.538 -0.76 0.022
4 C8 C C3 N Y N 0 5.025 0.53 -0.089
5 N2 N N1 N N N 1 6.485 0.762 -0.173
6 O4 O O1 N N N -1 6.917 1.896 -0.271
7 O3 O O2 N N N 0 7.254 -0.182 -0.144
8 C7 C C4 N Y N 0 4.154 1.605 -0.123
9 C6 C C5 N Y N 0 2.793 1.397 -0.045
10 C5 C C6 N Y N 0 2.293 0.098 0.062
11 C4 C C7 N N N 0 0.836 -0.132 0.145
12 C C C13 N Y N 0 -4.126 0.254 0.021
13 O2 O O3 N N N 0 0.403 -1.264 0.237
14 N1 N N2 N N N 0 -0.014 0.914 0.118
15 C3 C C8 N Y N 0 -1.395 0.692 0.085
16 C2 C C9 N Y N 0 -2.257 1.579 0.717
17 C1 C C10 N Y N 0 -3.62 1.357 0.683
18 C11 C C11 N Y N 0 -1.906 -0.412 -0.584
19 C12 C C12 N Y N 0 -3.27 -0.627 -0.615
20 S S S1 N N N 0 -5.865 -0.026 -0.019
21 O O O4 N N N 0 -6.042 -1.418 -0.245
22 O1 O O5 N N N 0 -6.407 0.655 1.104
23 N N N3 N N N 0 -6.454 0.744 -1.362
24 H1 H H1 N N N 0 5.223 -1.594 0.048
25 H2 H H2 N N N 0 4.542 2.609 -0.209
26 H3 H H3 N N N 0 2.115 2.238 -0.071
27 H4 H H4 N N N 0 0.332 1.82 0.122
28 H5 H H5 N N N 0 -1.862 2.44 1.235
29 H6 H H6 N N N 0 -4.291 2.046 1.175
30 H7 H H7 N N N 0 -1.239 -1.1 -1.081
31 H8 H H8 N N N 0 -3.669 -1.486 -1.135
32 H10 H H10 N N N 0 -6.017 1.543 -1.694
33 H9 H H9 N N N 0 -7.237 0.395 -1.816