Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : O6K

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 84


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O26 O O1 N N N 0 4.974 0.538 0.53
2 C24 C C1 N N N 0 5.706 -0.404 0.758
3 O25 O O2 N N N 0 7.042 -0.234 0.761
4 C27 C C2 N N N 0 7.537 1.103 0.483
5 C31 C C3 N N N 0 6.996 2.076 1.533
6 C32 C C4 N N N 0 9.066 1.101 0.53
7 C33 C C5 N N N 0 7.069 1.541 -0.906
8 N23 N N1 N N N 0 5.181 -1.619 1.014
9 C19 C C6 N N N 0 3.792 -1.773 1.123
10 C21 C C7 N N N 0 2.95 -1.441 0.04
11 O22 O O3 N N N 0 3.429 -1.017 -0.999
12 C18 C C8 N N N 0 3.237 -2.253 2.277
13 C17 C C9 N N N 0 1.845 -2.398 2.359
14 C16 C C10 N N N 0 1.066 -2.066 1.304
15 N15 N N2 N N N 0 1.617 -1.594 0.154
16 C20 C C11 S N N 0 0.749 -1.247 -0.975
17 C22 C C12 N N N 0 -0.035 -2.486 -1.414
18 C29 C C13 N N N 0 0.935 -3.537 -1.957
19 C34 C C14 N N N 0 0.356 -4.9 -2.342
20 C30 C C15 N N N 0 0.804 -3.924 -3.432
21 C36 C C16 N N N 0 -0.213 -0.166 -0.555
22 O37 O O4 N N N 0 -0.178 0.271 0.576
23 N38 N N3 N N N 0 -1.114 0.314 -1.435
24 C40 C C17 S N N 0 -1.975 1.438 -1.062
25 C42 C C18 N N N 0 -1.203 2.749 -1.224
26 C45 C C19 S N N 0 -2.074 3.916 -0.755
27 C47 C C20 N N N 0 -2.342 3.812 0.73
28 O48 O O5 N N N 0 -3.147 3.062 1.24
29 N49 N N4 N N N 0 -1.559 4.673 1.403
30 C51 C C21 N N N 0 -0.69 5.427 0.491
31 C54 C C22 N N N 0 -1.316 5.254 -0.914
32 C57 C C23 R N N 0 -3.208 1.458 -1.968
33 O40 O O6 N N N 0 -2.798 1.604 -3.329
34 C35 C C24 N N N 0 -3.97 0.167 -1.808
35 O41 O O7 N N N 0 -4.066 -0.6 -2.743
36 N36 N N5 N N N 0 -4.544 -0.135 -0.627
37 C13 C C25 N N N 0 -5.284 -1.39 -0.472
38 C14 C C26 N Y N 0 -5.822 -1.485 0.933
39 C28 C C27 N Y N 0 -7.074 -0.98 1.229
40 C26 C C28 N Y N 0 -7.567 -1.067 2.517
41 C25 C C29 N Y N 0 -6.809 -1.66 3.509
42 C23 C C30 N Y N 0 -5.557 -2.165 3.213
43 C15 C C31 N Y N 0 -5.066 -2.084 1.923
44 H1 H H1 N N N 0 7.329 1.764 2.523
45 H2 H H2 N N N 0 7.367 3.079 1.324
46 H3 H H3 N N N 0 5.906 2.077 1.5
47 H4 H H4 N N N 0 9.451 0.408 -0.218
48 H5 H H5 N N N 0 9.437 2.104 0.321
49 H6 H H6 N N N 0 9.399 0.789 1.52
50 H7 H H7 N N N 0 5.98 1.543 -0.94
51 H8 H H8 N N N 0 7.441 2.544 -1.115
52 H9 H H9 N N N 0 7.455 0.848 -1.654
53 H10 H H10 N N N 0 5.765 -2.386 1.124
54 H11 H H11 N N N 0 3.864 -2.517 3.116
55 H12 H H12 N N N 0 1.394 -2.776 3.265
56 H13 H H13 N N N 0 -0.005 -2.182 1.375
57 H14 H H14 N N N 0 1.358 -0.889 -1.804
58 H15 H H15 N N N 0 -0.575 -2.896 -0.561
59 H16 H H16 N N N 0 -0.744 -2.208 -2.194
60 H17 H H17 N N N 0 1.937 -3.518 -1.528
61 H18 H H18 N N N 0 0.978 -5.778 -2.167
62 H19 H H19 N N N 0 -0.715 -5.048 -2.208
63 H20 H H20 N N N 0 0.027 -3.43 -4.015
64 H21 H H21 N N N 0 1.72 -4.16 -3.973
65 H22 H H22 N N N 0 -1.191 -0.085 -2.316
66 H23 H H23 N N N 0 -2.289 1.327 -0.024
67 H24 H H24 N N N 0 -0.293 2.711 -0.625
68 H25 H H25 N N N 0 -0.941 2.889 -2.273
69 H26 H H26 N N N 0 -3.011 3.939 -1.312
70 H27 H H27 N N N 0 -1.566 4.781 2.366
71 H31 H H31 N N N 0 -2.005 6.07 -1.138
72 H28 H H28 N N N 0 -0.675 6.481 0.77
73 H29 H H29 N N N 0 0.32 5.018 0.507
74 H30 H H30 N N N 0 -0.544 5.178 -1.679
75 H34 H H34 N N N 0 -4.467 0.478 0.12
76 H35 H H35 N N N 0 -6.111 -1.414 -1.181
77 H36 H H36 N N N 0 -4.617 -2.231 -0.663
78 H37 H H37 N N N 0 -7.666 -0.516 0.454
79 H38 H H38 N N N 0 -8.545 -0.671 2.749
80 H39 H H39 N N N 0 -7.194 -1.727 4.516
81 H40 H H40 N N N 0 -4.966 -2.633 3.987
82 H41 H H41 N N N 0 -4.088 -2.479 1.692
83 H32 H H32 N N N 0 -3.85 2.295 -1.691
84 H33 H H33 N N N 0 -2.223 0.893 -3.645