Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : N37

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 64


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -4.247 -1.959 0.371
2 C2 C C2 N Y N 0 -5.22 -4.016 0.694
3 C3 C C3 N Y N 0 -6.514 -2.164 1.168
4 C4 C C4 N Y N 0 -5.436 -1.342 0.797
5 C5 C C5 N Y N 0 -4.026 0.234 0.317
6 C6 C C6 R N N 0 -2.0 -1.087 -0.403
7 C7 C C7 R N N 0 -1.972 -1.127 -1.947
8 C8 C C8 S N N 0 -0.687 -0.353 -2.319
9 C9 C C9 R N N 0 -0.092 0.063 -0.955
10 C10 C C10 N N N 0 0.532 1.457 -1.049
11 C11 C C11 S N N 0 1.179 1.817 0.29
12 C12 C C12 N N N 0 1.706 3.253 0.231
13 C13 C C13 N N N 0 0.531 4.222 0.086
14 C14 C C14 S N N 0 1.063 5.649 -0.066
15 C15 C C15 N N N 0 -0.088 6.589 -0.317
16 C16 C C16 N N N 0 2.294 0.896 0.56
17 C17 C C17 N N N 0 3.184 0.161 0.776
18 C18 C C18 N Y N 0 4.268 -0.736 1.039
19 C19 C C19 N Y N 0 5.017 -0.604 2.21
20 C20 C C20 N Y N 0 6.063 -1.469 2.466
21 C21 C C21 N Y N 0 6.377 -2.467 1.566
22 C22 C C22 N Y N 0 5.636 -2.611 0.391
23 C23 C C23 N Y N 0 4.576 -1.745 0.129
24 C24 C C24 N N N 0 5.974 -3.681 -0.572
25 N1 N N1 N Y N 0 -3.376 -0.94 0.08
26 N2 N N2 N Y N 0 -4.185 -3.286 0.336
27 N3 N N3 N Y N 0 -6.358 -3.482 1.1
28 N4 N N4 N N N 0 -7.709 -1.613 1.596
29 N5 N N5 N Y N 0 -5.234 -0.004 0.739
30 N6 N N6 N N N 0 1.759 6.045 1.165
31 N7 N N7 N N N 0 6.997 -4.52 -0.315
32 O1 O O1 N N N 0 -1.217 0.073 -0.049
33 O2 O O2 N N N 0 -1.895 -2.477 -2.412
34 O3 O O3 N N N 0 0.222 -1.201 -3.024
35 O4 O O4 N N N 0 -0.649 6.653 -1.535
36 O5 O O5 N N N 0 -0.504 7.286 0.577
37 O6 O O6 N N N 0 5.328 -3.805 -1.595
38 H1 H H1 N N N 0 -5.137 -5.092 0.654
39 H2 H H2 N N N 0 -3.6 1.217 0.18
40 H3 H H3 N N N 0 -1.549 -1.99 0.008
41 H4 H H4 N N N 0 -2.85 -0.63 -2.359
42 H5 H H5 N N N 0 -0.93 0.527 -2.914
43 H6 H H6 N N N 0 0.652 -0.664 -0.628
44 H7 H H7 N N N 0 1.29 1.463 -1.832
45 H8 H H8 N N N 0 -0.243 2.186 -1.287
46 H9 H H9 N N N 0 0.438 1.735 1.085
47 H10 H H10 N N N 0 2.251 3.477 1.148
48 H11 H H11 N N N 0 2.373 3.36 -0.624
49 H12 H H12 N N N 0 -0.052 3.956 -0.796
50 H13 H H13 N N N 0 -0.101 4.162 0.972
51 H14 H H14 N N N 0 1.757 5.69 -0.905
52 H15 H H15 N N N 0 4.776 0.175 2.918
53 H16 H H16 N N N 0 6.639 -1.362 3.373
54 H17 H H17 N N N 0 7.197 -3.14 1.772
55 H18 H H18 N N N 0 4.0 -1.852 -0.778
56 H19 H H19 N N N 0 -7.81 -0.649 1.642
57 H20 H H20 N N N 0 -8.446 -2.191 1.85
58 H21 H H21 N N N 0 2.175 6.959 1.067
59 H22 H H22 N N N 0 1.137 6.014 1.959
60 H24 H H24 N N N 0 7.512 -4.422 0.501
61 H25 H H25 N N N 0 7.218 -5.223 -0.947
62 H26 H H26 N N N 0 -1.874 -2.56 -3.375
63 H27 H H27 N N N 0 -0.125 -1.54 -3.86
64 H28 H H28 N N N 0 -1.333 7.323 -1.668