data_N37
#
_chem_comp.id N37
_chem_comp.name
9-{9-amino-6-[(3-carbamoylphenyl)ethynyl]-5,6,7,8,9-pentadeoxy-D-glycero-alpha-L-talo-decofuranuronosyl}-9H-purin-6-amine
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H27 N7 O6"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2019-05-01
_chem_comp.pdbx_modified_date 2019-10-18
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 509.514
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code N37
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6ORR
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
N37 C1 C1 C 0 1 Y N N N N N -3.943 -2.823 -9.484 -4.247 -1.959 0.371 C1 N37 1
N37 C2 C2 C 0 1 Y N N N N N -5.984 -2.689 -8.687 -5.220 -4.016 0.694 C2 N37 2
N37 C3 C3 C 0 1 Y N N N N N -5.659 -1.856 -10.811 -6.514 -2.164 1.168 C3 N37 3
N37 C4 C4 C 0 1 Y N N N N N -4.346 -2.206 -10.709 -5.436 -1.342 0.797 C4 N37 4
N37 C5 C5 C 0 1 Y N N N N N -2.170 -2.678 -10.792 -4.026 0.234 0.317 C5 N37 5
N37 C6 C6 C 0 1 N N R N N N -1.926 -3.646 -8.663 -2.000 -1.087 -0.403 C6 N37 6
N37 C7 C7 C 0 1 N N R N N N -1.019 -4.694 -9.207 -1.972 -1.127 -1.947 C7 N37 7
N37 C8 C8 C 0 1 N N S N N N 0.090 -4.772 -8.249 -0.687 -0.353 -2.319 C8 N37 8
N37 C9 C9 C 0 1 N N R N N N 0.069 -3.504 -7.461 -0.092 0.063 -0.955 C9 N37 9
N37 C10 C10 C 0 1 N N N N N N 1.379 -2.801 -7.589 0.532 1.457 -1.049 C10 N37 10
N37 C11 C11 C 0 1 N N S N N N 2.370 -3.358 -6.567 1.179 1.817 0.290 C11 N37 11
N37 C12 C12 C 0 1 N N N N N N 1.709 -3.446 -5.191 1.706 3.253 0.231 C12 N37 12
N37 C13 C13 C 0 1 N N N N N N 2.790 -3.572 -4.117 0.531 4.222 0.086 C13 N37 13
N37 C14 C14 C 0 1 N N S N N N 2.156 -3.833 -2.752 1.063 5.649 -0.066 C14 N37 14
N37 C15 C15 C 0 1 N N N N N N 3.138 -3.405 -1.665 -0.088 6.589 -0.317 C15 N37 15
N37 C16 C16 C 0 1 N N N N N N 3.578 -2.428 -6.491 2.294 0.896 0.560 C16 N37 16
N37 C17 C17 C 0 1 N N N N N N 4.502 -1.689 -6.434 3.184 0.161 0.776 C17 N37 17
N37 C18 C18 C 0 1 Y N N N N N 5.675 -0.716 -6.375 4.268 -0.736 1.039 C18 N37 18
N37 C19 C19 C 0 1 Y N N N N N 6.832 -1.050 -5.690 5.017 -0.604 2.210 C19 N37 19
N37 C20 C20 C 0 1 Y N N N N N 7.891 -0.156 -5.646 6.063 -1.469 2.466 C20 N37 20
N37 C21 C21 C 0 1 Y N N N N N 7.791 1.069 -6.285 6.377 -2.467 1.566 C21 N37 21
N37 C22 C22 C 0 1 Y N N N N N 6.633 1.401 -6.970 5.636 -2.611 0.391 C22 N37 22
N37 C23 C23 C 0 1 Y N N N N N 5.576 0.509 -7.014 4.576 -1.745 0.129 C23 N37 23
N37 C24 C24 C 0 1 N N N N N N 6.516 2.749 -7.679 5.974 -3.681 -0.572 C24 N37 24
N37 N1 N1 N 0 1 Y N N N N N -2.700 -3.028 -9.683 -3.376 -0.940 0.080 N1 N37 25
N37 N2 N2 N 0 1 Y N N N N N -4.723 -3.086 -8.446 -4.185 -3.286 0.336 N2 N37 26
N37 N3 N3 N 0 1 Y N N N N N -6.461 -2.104 -9.795 -6.358 -3.482 1.100 N3 N37 27
N37 N4 N4 N 0 1 N N N N N N -6.168 -1.223 -12.013 -7.709 -1.613 1.596 N4 N37 28
N37 N5 N5 N 0 1 Y N N N N N -3.110 -2.115 -11.596 -5.234 -0.004 0.739 N5 N37 29
N37 N6 N6 N 0 1 N N N N N N 0.919 -3.082 -2.625 1.759 6.045 1.165 N6 N37 30
N37 N7 N7 N 0 1 N N N N N N 5.211 3.333 -7.923 6.997 -4.520 -0.315 N7 N37 31
N37 O1 O1 O 0 1 N N N N N N -1.030 -2.678 -7.996 -1.217 0.073 -0.049 O1 N37 32
N37 O2 O2 O 0 1 N N N N N N -1.699 -5.961 -9.275 -1.895 -2.477 -2.412 O2 N37 33
N37 O3 O3 O 0 1 N N N N N N -0.116 -5.888 -7.361 0.222 -1.201 -3.024 O3 N37 34
N37 O4 O4 O 0 1 N N N N N N 2.721 -2.825 -0.628 -0.649 6.653 -1.535 O4 N37 35
N37 O5 O5 O 0 1 N N N N N N 4.369 -3.634 -1.811 -0.504 7.286 0.577 O5 N37 36
N37 O6 O6 O 0 1 N N N N N N 7.492 3.317 -8.034 5.328 -3.805 -1.595 O6 N37 37
N37 H1 H1 H 0 1 N N N N N N -6.697 -2.862 -7.895 -5.137 -5.092 0.654 H1 N37 38
N37 H2 H2 H 0 1 N N N N N N -1.130 -2.810 -11.052 -3.600 1.217 0.180 H2 N37 39
N37 H3 H3 H 0 1 N N N N N N -2.589 -4.101 -7.912 -1.549 -1.990 0.008 H3 N37 40
N37 H4 H4 H 0 1 N N N N N N -0.649 -4.395 -10.199 -2.850 -0.630 -2.359 H4 N37 41
N37 H5 H5 H 0 1 N N N N N N 1.048 -4.869 -8.780 -0.930 0.527 -2.914 H5 N37 42
N37 H6 H6 H 0 1 N N N N N N -0.122 -3.734 -6.402 0.652 -0.664 -0.628 H6 N37 43
N37 H7 H7 H 0 1 N N N N N N 1.777 -2.953 -8.603 1.290 1.463 -1.832 H7 N37 44
N37 H8 H8 H 0 1 N N N N N N 1.235 -1.725 -7.409 -0.243 2.186 -1.287 H8 N37 45
N37 H9 H9 H 0 1 N N N N N N 2.697 -4.360 -6.882 0.438 1.735 1.085 H9 N37 46
N37 H10 H10 H 0 1 N N N N N N 1.115 -2.538 -5.010 2.251 3.477 1.148 H10 N37 47
N37 H11 H11 H 0 1 N N N N N N 1.051 -4.327 -5.155 2.373 3.360 -0.624 H11 N37 48
N37 H12 H12 H 0 1 N N N N N N 3.459 -4.407 -4.372 -0.052 3.956 -0.796 H12 N37 49
N37 H13 H13 H 0 1 N N N N N N 3.370 -2.638 -4.075 -0.101 4.162 0.972 H13 N37 50
N37 H14 H14 H 0 1 N N N N N N 1.955 -4.910 -2.650 1.757 5.690 -0.905 H14 N37 51
N37 H15 H15 H 0 1 N N N N N N 6.909 -2.005 -5.191 4.776 0.175 2.918 H15 N37 52
N37 H16 H16 H 0 1 N N N N N N 8.794 -0.415 -5.113 6.639 -1.362 3.373 H16 N37 53
N37 H17 H17 H 0 1 N N N N N N 8.616 1.765 -6.249 7.197 -3.140 1.772 H17 N37 54
N37 H18 H18 H 0 1 N N N N N N 4.673 0.768 -7.547 4.000 -1.852 -0.778 H18 N37 55
N37 H19 H19 H 0 1 N N N N N N -7.145 -1.041 -11.906 -7.810 -0.649 1.642 H19 N37 56
N37 H20 H20 H 0 1 N N N N N N -5.684 -0.362 -12.167 -8.446 -2.191 1.850 H20 N37 57
N37 H21 H21 H 0 1 N N N N N N 0.512 -3.259 -1.729 2.175 6.959 1.067 H21 N37 58
N37 H22 H22 H 0 1 N N N N N N 1.111 -2.105 -2.716 1.137 6.014 1.959 H22 N37 59
N37 H24 H24 H 0 1 N N N N N N 5.137 4.214 -8.390 7.512 -4.422 0.501 H24 N37 60
N37 H25 H25 H 0 1 N N N N N N 4.385 2.855 -7.624 7.218 -5.223 -0.947 H25 N37 61
N37 H26 H26 H 0 1 N N N N N N -1.109 -6.619 -9.623 -1.874 -2.560 -3.375 H26 N37 62
N37 H27 H27 H 0 1 N N N N N N 0.603 -5.937 -6.742 -0.125 -1.540 -3.860 H27 N37 63
N37 H28 H28 H 0 1 N N N N N N 3.455 -2.627 -0.058 -1.333 7.323 -1.668 H28 N37 64
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
N37 N4 C3 SING N N 1
N37 N5 C5 DOUB Y N 2
N37 N5 C4 SING Y N 3
N37 C3 C4 DOUB Y N 4
N37 C3 N3 SING Y N 5
N37 C5 N1 SING Y N 6
N37 C4 C1 SING Y N 7
N37 N3 C2 DOUB Y N 8
N37 N1 C1 SING Y N 9
N37 N1 C6 SING N N 10
N37 C1 N2 DOUB Y N 11
N37 O2 C7 SING N N 12
N37 C7 C6 SING N N 13
N37 C7 C8 SING N N 14
N37 C2 N2 SING Y N 15
N37 C6 O1 SING N N 16
N37 C8 C9 SING N N 17
N37 C8 O3 SING N N 18
N37 O6 C24 DOUB N N 19
N37 O1 C9 SING N N 20
N37 N7 C24 SING N N 21
N37 C24 C22 SING N N 22
N37 C10 C9 SING N N 23
N37 C10 C11 SING N N 24
N37 C23 C22 DOUB Y N 25
N37 C23 C18 SING Y N 26
N37 C22 C21 SING Y N 27
N37 C11 C16 SING N N 28
N37 C11 C12 SING N N 29
N37 C16 C17 TRIP N N 30
N37 C17 C18 SING N N 31
N37 C18 C19 DOUB Y N 32
N37 C21 C20 DOUB Y N 33
N37 C19 C20 SING Y N 34
N37 C12 C13 SING N N 35
N37 C13 C14 SING N N 36
N37 C14 N6 SING N N 37
N37 C14 C15 SING N N 38
N37 O5 C15 DOUB N N 39
N37 C15 O4 SING N N 40
N37 C2 H1 SING N N 41
N37 C5 H2 SING N N 42
N37 C6 H3 SING N N 43
N37 C7 H4 SING N N 44
N37 C8 H5 SING N N 45
N37 C9 H6 SING N N 46
N37 C10 H7 SING N N 47
N37 C10 H8 SING N N 48
N37 C11 H9 SING N N 49
N37 C12 H10 SING N N 50
N37 C12 H11 SING N N 51
N37 C13 H12 SING N N 52
N37 C13 H13 SING N N 53
N37 C14 H14 SING N N 54
N37 C19 H15 SING N N 55
N37 C20 H16 SING N N 56
N37 C21 H17 SING N N 57
N37 C23 H18 SING N N 58
N37 N4 H19 SING N N 59
N37 N4 H20 SING N N 60
N37 N6 H21 SING N N 61
N37 N6 H22 SING N N 62
N37 N7 H24 SING N N 63
N37 N7 H25 SING N N 64
N37 O2 H26 SING N N 65
N37 O3 H27 SING N N 66
N37 O4 H28 SING N N 67
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
N37 SMILES ACDLabs 12.01 "c12ncnc(c1ncn2C3OC(C(C3O)O)CC(C#Cc4cccc(c4)C(N)=O)CCC(N)C(O)=O)N"
N37 InChI InChI 1.03 InChI=1S/C24H27N7O6/c25-15(24(35)36)7-6-13(5-4-12-2-1-3-14(8-12)21(27)34)9-16-18(32)19(33)23(37-16)31-11-30-17-20(26)28-10-29-22(17)31/h1-3,8,10-11,13,15-16,18-19,23,32-33H,6-7,9,25H2,(H2,27,34)(H,35,36)(H2,26,28,29)/t13-,15-,16+,18+,19+,23+/m0/s1
N37 InChIKey InChI 1.03 QRKSTGPKAQGBDD-GGPTZFPQSA-N
N37 SMILES_CANONICAL CACTVS 3.385 "N[C@@H](CC[C@@H](C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23)C#Cc4cccc(c4)C(N)=O)C(O)=O"
N37 SMILES CACTVS 3.385 "N[CH](CC[CH](C[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23)C#Cc4cccc(c4)C(N)=O)C(O)=O"
N37 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)C(=O)N)C#C[C@@H](CC[C@@H](C(=O)O)N)C[C@@H]2[C@H]([C@H]([C@@H](O2)n3cnc4c3ncnc4N)O)O"
N37 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)C(=O)N)C#CC(CCC(C(=O)O)N)CC2C(C(C(O2)n3cnc4c3ncnc4N)O)O"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
N37 "SYSTEMATIC NAME" ACDLabs 12.01 9-{9-amino-6-[(3-carbamoylphenyl)ethynyl]-5,6,7,8,9-pentadeoxy-D-glycero-alpha-L-talo-decofuranuronosyl}-9H-purin-6-amine
N37 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S},5~{S})-7-(3-aminocarbonylphenyl)-5-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl]-2-azanyl-hept-6-ynoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
N37 'Create component' 2019-05-01 RCSB
N37 'Initial release' 2019-10-23 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
N37 C1 C 5.598 -1.088 1
N37 C2 C 3.000 -1.088 2
N37 C3 C 4.299 -3.338 3
N37 C4 C 5.598 -2.588 4
N37 C5 C 7.893 -1.838 5
N37 C6 C 7.483 0.795 6
N37 C7 C 6.604 2.010 7
N37 C8 C 7.487 3.222 8
N37 C9 C 8.913 2.756 9
N37 C10 C 10.129 3.636 10
N37 C11 C 11.498 3.023 11
N37 C12 C 12.713 3.903 12
N37 C13 C 14.082 3.290 13
N37 C14 C 15.297 4.170 14
N37 C15 C 16.666 3.557 15
N37 C16 C 11.652 1.531 16
N37 C17 C 11.806 0.039 17
N37 C18 C 11.960 -1.453 18
N37 C19 C 10.745 -2.333 19
N37 C20 C 10.899 -3.825 20
N37 C21 C 12.269 -4.437 21
N37 C22 C 13.484 -3.557 22
N37 C23 C 13.330 -2.065 23
N37 C24 C 14.853 -4.170 24
N37 N1 N 7.018 -0.631 25
N37 N2 N 4.299 -0.338 26
N37 N3 N 3.000 -2.588 27
N37 N4 N 4.299 -4.838 28
N37 N5 N 7.018 -3.045 29
N37 N6 N 15.143 5.662 30
N37 N7 N 15.007 -5.662 31
N37 O1 O 8.911 1.256 32
N37 O2 O 5.104 2.013 33
N37 O3 O 7.027 4.649 34
N37 O4 O 16.820 2.065 35
N37 O5 O 17.881 4.437 36
N37 O6 O 16.068 -3.290 37
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
N37 N4 C3 SINGLE NONE 1
N37 N5 C5 DOUBLE NONE 2
N37 N5 C4 SINGLE NONE 3
N37 C3 C4 DOUBLE NONE 4
N37 C3 N3 SINGLE NONE 5
N37 C5 N1 SINGLE NONE 6
N37 C4 C1 SINGLE NONE 7
N37 N3 C2 DOUBLE NONE 8
N37 N1 C1 SINGLE NONE 9
N37 C6 N1 SINGLE BEGINWEDGE 10
N37 C1 N2 DOUBLE NONE 11
N37 C7 O2 SINGLE BEGINDASH 12
N37 C7 C6 SINGLE NONE 13
N37 C7 C8 SINGLE NONE 14
N37 C2 N2 SINGLE NONE 15
N37 C6 O1 SINGLE NONE 16
N37 C8 C9 SINGLE NONE 17
N37 C8 O3 SINGLE BEGINDASH 18
N37 O6 C24 DOUBLE NONE 19
N37 O1 C9 SINGLE NONE 20
N37 N7 C24 SINGLE NONE 21
N37 C24 C22 SINGLE NONE 22
N37 C9 C10 SINGLE BEGINWEDGE 23
N37 C11 C10 SINGLE BEGINDASH 24
N37 C23 C22 DOUBLE NONE 25
N37 C23 C18 SINGLE NONE 26
N37 C22 C21 SINGLE NONE 27
N37 C11 C16 SINGLE NONE 28
N37 C11 C12 SINGLE NONE 29
N37 C16 C17 TRIPLE NONE 30
N37 C17 C18 SINGLE NONE 31
N37 C18 C19 DOUBLE NONE 32
N37 C21 C20 DOUBLE NONE 33
N37 C19 C20 SINGLE NONE 34
N37 C12 C13 SINGLE NONE 35
N37 C13 C14 SINGLE NONE 36
N37 C14 N6 SINGLE BEGINDASH 37
N37 C14 C15 SINGLE NONE 38
N37 O5 C15 DOUBLE NONE 39
N37 C15 O4 SINGLE NONE 40
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
N37 MurckoScaffold S1 scaffold 'C(#Cc1ccccc1)CC[C@@H]1CC[C@H](n2cnc3cncnc32)O1' InChI=1S/C19H18N4O/c1-2-6-15(7-3-1)8-4-5-9-16-10-11-18(24-16)23-14-22-17-12-20-13-21-19(17)23/h1-3,6-7,12-14,16,18H,5,9-11H2/t16-,18-/m1/s1 ZQGMIZRTJIJNKS-SJLPKXTDSA-N
N37 adenine F1 fragment 'Nc1ncnc2nc[nH]c12' InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10) GFFGJBXGBJISGV-UHFFFAOYSA-N
N37 amide F2 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
N37 imidazole F3 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
N37 peptide F4 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
N37 phenyl F5 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
N37 purine F6 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
N37 pyrimidine F7 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
N37 C1 S1 1
N37 C2 S1 1
N37 C3 S1 1
N37 C4 S1 1
N37 C5 S1 1
N37 C6 S1 1
N37 C7 S1 1
N37 C8 S1 1
N37 C9 S1 1
N37 C10 S1 1
N37 C11 S1 1
N37 C16 S1 1
N37 C17 S1 1
N37 C18 S1 1
N37 C19 S1 1
N37 C20 S1 1
N37 C21 S1 1
N37 C22 S1 1
N37 C23 S1 1
N37 N1 S1 1
N37 N2 S1 1
N37 N3 S1 1
N37 N5 S1 1
N37 O1 S1 1
N37 N3 F1 1
N37 C3 F1 1
N37 C4 F1 1
N37 C1 F1 1
N37 N2 F1 1
N37 C2 F1 1
N37 N1 F1 1
N37 C5 F1 1
N37 N5 F1 1
N37 N4 F1 1
N37 N7 F2 1
N37 C24 F2 1
N37 O6 F2 1
N37 C22 F2 1
N37 C1 F3 1
N37 C4 F3 1
N37 N5 F3 1
N37 C5 F3 1
N37 N1 F3 1
N37 O5 F4 1
N37 C15 F4 1
N37 C14 F4 1
N37 N6 F4 1
N37 C18 F5 1
N37 C23 F5 1
N37 C22 F5 1
N37 C21 F5 1
N37 C20 F5 1
N37 C19 F5 1
N37 N5 F6 1
N37 C5 F6 1
N37 N1 F6 1
N37 C1 F6 1
N37 C4 F6 1
N37 C3 F6 1
N37 N3 F6 1
N37 C2 F6 1
N37 N2 F6 1
N37 C4 F7 1
N37 C3 F7 1
N37 N3 F7 1
N37 C2 F7 1
N37 N2 F7 1
N37 C1 F7 1
#
_pdbe_chem_comp_rdkit_properties.comp_id N37
_pdbe_chem_comp_rdkit_properties.exactmw 509.202
_pdbe_chem_comp_rdkit_properties.amw 509.523
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 13
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 9
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 12
_pdbe_chem_comp_rdkit_properties.NumHBD 6
_pdbe_chem_comp_rdkit_properties.NumHBA 12
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 37
_pdbe_chem_comp_rdkit_properties.NumAtoms 64
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 13
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.375
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 6
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 249.367
_pdbe_chem_comp_rdkit_properties.tpsa 225.720
_pdbe_chem_comp_rdkit_properties.CrippenClogP -1.542
_pdbe_chem_comp_rdkit_properties.CrippenMR 126.887
_pdbe_chem_comp_rdkit_properties.chi0v 17.580
_pdbe_chem_comp_rdkit_properties.chi1v 9.362
_pdbe_chem_comp_rdkit_properties.chi2v 4.107
_pdbe_chem_comp_rdkit_properties.chi3v 4.107
_pdbe_chem_comp_rdkit_properties.chi4v 2.508
_pdbe_chem_comp_rdkit_properties.chi0n 44.580
_pdbe_chem_comp_rdkit_properties.chi1n 22.270
_pdbe_chem_comp_rdkit_properties.chi2n 4.107
_pdbe_chem_comp_rdkit_properties.chi3n 4.107
_pdbe_chem_comp_rdkit_properties.chi4n 2.508
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.090
_pdbe_chem_comp_rdkit_properties.kappa1 8.467
_pdbe_chem_comp_rdkit_properties.kappa2 10.891
_pdbe_chem_comp_rdkit_properties.kappa3 5.677
_pdbe_chem_comp_rdkit_properties.Phi 2.492
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
N37 UniChem PubChem 139267760
N37 UniChem BindingDb 50530712
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
N37 C1 -4.399 0.331 0.702 ETKDGv3 1
N37 C2 -3.047 0.776 2.569 ETKDGv3 2
N37 C3 -5.169 1.885 2.339 ETKDGv3 3
N37 C4 -5.375 1.230 1.197 ETKDGv3 4
N37 C5 -6.038 0.622 -0.777 ETKDGv3 5
N37 C6 -3.958 -0.636 -1.648 ETKDGv3 6
N37 C7 -3.071 0.468 -2.238 ETKDGv3 7
N37 C8 -1.684 0.096 -1.761 ETKDGv3 8
N37 C9 -1.809 -1.402 -1.497 ETKDGv3 9
N37 C10 -0.876 -1.919 -0.380 ETKDGv3 10
N37 C11 0.629 -1.862 -0.738 ETKDGv3 11
N37 C12 1.431 -2.865 0.120 ETKDGv3 12
N37 C13 2.906 -2.964 -0.316 ETKDGv3 13
N37 C14 3.698 -3.975 0.534 ETKDGv3 14
N37 C15 3.216 -5.386 0.313 ETKDGv3 15
N37 C16 1.147 -0.499 -0.524 ETKDGv3 16
N37 C17 1.560 0.620 -0.348 ETKDGv3 17
N37 C18 2.041 1.958 -0.139 ETKDGv3 18
N37 C19 1.200 2.998 -0.227 ETKDGv3 19
N37 C20 1.702 4.370 -0.017 ETKDGv3 20
N37 C21 2.992 4.579 0.271 ETKDGv3 21
N37 C22 3.934 3.433 0.388 ETKDGv3 22
N37 C23 3.469 2.185 0.177 ETKDGv3 23
N37 C24 5.365 3.655 0.710 ETKDGv3 24
N37 N1 -4.807 -0.106 -0.581 ETKDGv3 25
N37 N2 -3.270 0.114 1.303 ETKDGv3 26
N37 N3 -3.941 1.609 3.051 ETKDGv3 27
N37 N4 -6.099 2.848 2.835 ETKDGv3 28
N37 N5 -6.396 1.388 0.222 ETKDGv3 29
N37 N6 5.127 -3.865 0.232 ETKDGv3 30
N37 N7 5.803 4.847 1.368 ETKDGv3 31
N37 O1 -3.146 -1.672 -1.136 ETKDGv3 32
N37 O2 -3.164 0.499 -3.645 ETKDGv3 33
N37 O3 -0.704 0.360 -2.733 ETKDGv3 34
N37 O4 2.671 -6.103 1.373 ETKDGv3 35
N37 O5 3.299 -5.918 -0.827 ETKDGv3 36
N37 O6 6.220 2.778 0.411 ETKDGv3 37
N37 H1 -2.132 0.593 3.116 ETKDGv3 38
N37 H2 -6.614 0.563 -1.690 ETKDGv3 39
N37 H3 -4.615 -1.068 -2.435 ETKDGv3 40
N37 H4 -3.348 1.473 -1.849 ETKDGv3 41
N37 H5 -1.460 0.639 -0.814 ETKDGv3 42
N37 H6 -1.590 -1.966 -2.433 ETKDGv3 43
N37 H7 -1.163 -2.978 -0.195 ETKDGv3 44
N37 H8 -1.070 -1.372 0.569 ETKDGv3 45
N37 H9 0.762 -2.130 -1.809 ETKDGv3 46
N37 H10 1.375 -2.571 1.192 ETKDGv3 47
N37 H11 0.968 -3.871 0.019 ETKDGv3 48
N37 H12 2.962 -3.248 -1.390 ETKDGv3 49
N37 H13 3.385 -1.967 -0.206 ETKDGv3 50
N37 H14 3.555 -3.714 1.607 ETKDGv3 51
N37 H15 0.152 2.847 -0.458 ETKDGv3 52
N37 H16 1.023 5.208 -0.108 ETKDGv3 53
N37 H17 3.339 5.596 0.390 ETKDGv3 54
N37 H18 4.129 1.329 0.252 ETKDGv3 55
N37 H19 -6.985 3.060 2.323 ETKDGv3 56
N37 H20 -5.899 3.354 3.726 ETKDGv3 57
N37 H21 5.653 -4.523 0.852 ETKDGv3 58
N37 H22 5.300 -4.160 -0.757 ETKDGv3 59
N37 H24 6.822 5.007 1.532 ETKDGv3 60
N37 H25 5.127 5.531 1.773 ETKDGv3 61
N37 H26 -2.916 -0.398 -3.992 ETKDGv3 62
N37 H27 -0.557 1.342 -2.721 ETKDGv3 63
N37 H28 2.338 -7.051 1.243 ETKDGv3 64
#