Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : N30

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 65


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C11 C C11 R N N 0 0.566 -0.704 1.759
2 O11 O O11 N N N 0 1.043 -1.701 0.857
3 C21 C C21 R N N 0 1.575 -0.478 2.89
4 N21 N N21 N N N 0 2.872 -0.114 2.367
5 C31 C C31 R N N 0 1.665 -1.709 3.795
6 O31 O O31 N N N 0 2.446 -1.376 4.944
7 C41 C C41 S N N 0 0.269 -2.137 4.256
8 O41 O O41 N N N 0 0.39 -3.393 4.92
9 C51 C C51 R N N 0 -0.699 -2.252 3.072
10 O51 O O51 N N N 0 -0.71 -1.044 2.305
11 C61 C C61 N N N 0 -2.133 -2.506 3.527
12 O61 O O61 N N N 0 -2.961 -2.588 2.381
13 C12 C C12 R N N 0 2.701 -2.596 -2.255
14 N12 N N12 N N N 0 2.268 -2.434 -3.643
15 C22 C C22 N N N 0 1.726 -3.496 -1.472
16 C32 C C32 S N N 0 0.371 -2.842 -1.143
17 N32 N N32 N N N 0 -0.459 -2.722 -2.341
18 C42 C C42 R N N 0 0.562 -1.471 -0.469
19 C52 C C52 R N N 0 1.537 -0.543 -1.216
20 O52 O O52 N N N 0 0.921 -0.032 -2.394
21 C62 C C62 S N N 0 2.869 -1.227 -1.57
22 O62 O O62 N N N 0 3.634 -1.427 -0.38
23 C13 C C13 S N N 0 0.798 1.384 -2.337
24 C23 C C23 R N N 0 0.043 1.869 -3.566
25 O23 O O23 N N N 0 0.353 3.239 -3.802
26 C33 C C33 S N N 0 -1.393 1.736 -3.101
27 O33 O O33 N N N 0 -2.298 2.523 -3.845
28 C43 C C43 R N N 0 -1.292 2.198 -1.656
29 O43 O O43 N N N 0 0.006 1.777 -1.199
30 C53 C C53 N N N 0 -2.366 1.608 -0.76
31 N53 N N53 N N N 0 -2.202 2.078 0.578
32 H11 H H11 N N N 0 0.435 0.217 1.181
33 H21 H H21 N N N 0 1.223 0.362 3.503
34 H211 H 1H21 N N N 0 2.922 0.204 1.425
35 H212 H 2H21 N N N 0 3.676 -0.384 2.888
36 H31 H H31 N N N 0 2.172 -2.542 3.293
37 HO31 H HO31 N N N 0 3.128 -0.758 4.641
38 H41 H H41 N N N 0 -0.11 -1.416 4.991
39 HO41 H HO41 N N N 0 0.669 -3.199 5.828
40 H51 H H51 N N N 0 -0.415 -3.092 2.426
41 H611 H 1H61 N N N 0 -2.473 -1.686 4.159
42 H612 H 2H61 N N N 0 -2.187 -3.444 4.079
43 HO61 H HO61 N N N 0 -2.379 -2.527 1.604
44 H12 H H12 N N N 0 3.673 -3.105 -2.275
45 H222 H 2H22 N N N 0 2.207 -3.789 -0.529
46 H121 H 1H12 N N N 0 2.324 -1.526 -4.044
47 H122 H 2H12 N N N 0 1.752 -3.177 -4.057
48 H221 H 1H22 N N N 0 1.565 -4.435 -2.019
49 H32 H H32 N N N 0 -0.155 -3.509 -0.449
50 H321 H 1H32 N N N 0 -0.747 -1.811 -2.616
51 H322 H 2H32 N N N 0 -0.866 -3.552 -2.708
52 H42 H H42 N N N 0 -0.411 -0.976 -0.367
53 H52 H H52 N N N 0 1.755 0.315 -0.569
54 H62 H H62 N N N 0 3.461 -0.567 -2.216
55 HO62 H HO62 N N N 0 3.256 -2.202 0.059
56 H13 H H13 N N N 0 1.796 1.823 -2.24
57 H23 H H23 N N N 0 0.251 1.303 -4.479
58 HO23 H HO23 N N N 0 0.35 3.677 -2.937
59 H33 H H33 N N N 0 -1.71 0.688 -3.154
60 HO33 H HO33 N N N 0 -2.925 1.914 -4.276
61 H43 H H43 N N N 0 -1.339 3.29 -1.582
62 H531 H 1H53 N N N 0 -2.282 0.526 -0.767
63 H532 H 2H53 N N N 0 -3.343 1.91 -1.121
64 HN1 H HN1 N N N 0 -1.93 1.43 1.308
65 HN2 H HN2 N N N 0 -2.549 2.994 0.835