data_N30
#
_chem_comp.id N30
_chem_comp.name
"(1R,2R,3S,4R,6S)-4,6-DIAMINO-2-[(5-AMINO-5-DEOXY-BETA-D-RIBOFURANOSYL)OXY]-3-HYDROXYCYCLOHEXYL 2-AMINO-2-DEOXY-ALPHA-D-GLUCOPYRANOSIDE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAD
_chem_comp.formula "C17 H34 N4 O10"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2007-01-12
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag ?
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 454.473
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code N30
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details "OpenEye/OEToolkits V1.4.2"
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code ?
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
N30 C11 C11 C 0 1 N N R N N N 20.366 9.324 5.665 0.566 -0.704 1.759 C11 N30 1
N30 O11 O11 O 0 1 N N N N N N 21.244 8.252 5.297 1.043 -1.701 0.857 O11 N30 2
N30 C21 C21 C 0 1 N N R N N N 18.946 9.016 5.093 1.575 -0.478 2.890 C21 N30 3
N30 N21 N21 N 0 1 N N N N N N 18.511 7.628 5.393 2.872 -0.114 2.367 N21 N30 4
N30 C31 C31 C 0 1 N N R N N N 18.894 9.212 3.566 1.665 -1.709 3.795 C31 N30 5
N30 O31 O31 O 0 1 N N N N N N 17.596 8.979 3.081 2.446 -1.376 4.944 O31 N30 6
N30 C41 C41 C 0 1 N N S N N N 19.350 10.618 3.214 0.269 -2.137 4.256 C41 N30 7
N30 O41 O41 O 0 1 N N N N N N 19.282 10.805 1.837 0.390 -3.393 4.920 O41 N30 8
N30 C51 C51 C 0 1 N N R N N N 20.804 10.845 3.716 -0.699 -2.252 3.072 C51 N30 9
N30 O51 O51 O 0 1 N N N N N N 20.864 10.633 5.143 -0.710 -1.044 2.305 O51 N30 10
N30 C61 C61 C 0 1 N N N N N N 21.310 12.236 3.412 -2.133 -2.506 3.527 C61 N30 11
N30 O61 O61 O 0 1 N N N N N N 22.690 12.276 3.368 -2.961 -2.588 2.381 O61 N30 12
N30 C12 C12 C 0 1 N N R N N N 24.607 6.284 7.062 2.701 -2.596 -2.255 C12 N30 13
N30 N12 N12 N 0 1 N N N N N N 25.832 5.987 7.837 2.268 -2.434 -3.643 N12 N30 14
N30 C22 C22 C 0 1 N N N N N N 24.881 7.282 5.888 1.726 -3.496 -1.472 C22 N30 15
N30 C32 C32 C 0 1 N N S N N N 23.533 7.509 5.111 0.371 -2.842 -1.143 C32 N30 16
N30 N32 N32 N 0 1 N N N N N N 23.714 8.440 3.957 -0.459 -2.722 -2.341 N32 N30 17
N30 C42 C42 C 0 1 N N R N N N 22.451 8.102 6.058 0.562 -1.471 -0.469 C42 N30 18
N30 C52 C52 C 0 1 N N R N N N 22.182 7.228 7.299 1.537 -0.543 -1.216 C52 N30 19
N30 O52 O52 O 0 1 N N N N N N 21.341 8.055 8.178 0.921 -0.032 -2.394 O52 N30 20
N30 C62 C62 C 0 1 N N S N N N 23.552 6.861 8.023 2.869 -1.227 -1.570 C62 N30 21
N30 O62 O62 O 0 1 N N N N N N 23.356 5.874 9.047 3.634 -1.427 -0.380 O62 N30 22
N30 C13 C13 C 0 1 N N S N N N 20.674 7.438 9.290 0.798 1.384 -2.337 C13 N30 23
N30 C23 C23 C 0 1 N N R N N N 20.154 8.477 10.337 0.043 1.869 -3.566 C23 N30 24
N30 O23 O23 O 0 1 N N N N N N 21.082 8.831 11.399 0.353 3.239 -3.802 O23 N30 25
N30 C33 C33 C 0 1 N N S N N N 18.894 7.744 10.766 -1.393 1.736 -3.101 C33 N30 26
N30 O33 O33 O 0 1 N N N N N N 19.205 6.673 11.722 -2.298 2.523 -3.845 O33 N30 27
N30 C43 C43 C 0 1 N N R N N N 18.327 7.172 9.472 -1.292 2.198 -1.656 C43 N30 28
N30 O43 O43 O 0 1 N N N N N N 19.520 6.719 8.838 0.006 1.777 -1.199 O43 N30 29
N30 C53 C53 C 0 1 N N N N N N 17.579 8.207 8.565 -2.366 1.608 -0.760 C53 N30 30
N30 N53 N53 N 0 1 N N N N N N 16.482 8.776 9.274 -2.202 2.078 0.578 N53 N30 31
N30 H11 H11 H 0 1 N N N N N N 20.325 9.402 6.761 0.435 0.217 1.181 H11 N30 32
N30 H21 H21 H 0 1 N N N N N N 18.267 9.727 5.586 1.223 0.362 3.503 H21 N30 33
N30 H211 1H21 H 0 0 N N N N N N 18.413 7.117 4.539 2.922 0.204 1.425 H211 N30 34
N30 H212 2H21 H 0 0 N N N N N N 19.194 7.182 5.972 3.676 -0.384 2.888 H212 N30 35
N30 H31 H31 H 0 1 N N N N N N 19.571 8.487 3.091 2.172 -2.542 3.293 H31 N30 36
N30 HO31 HO31 H 0 0 N N N N N N 16.990 8.926 3.810 3.128 -0.758 4.641 HO31 N30 37
N30 H41 H41 H 0 1 N N N N N N 18.688 11.346 3.705 -0.110 -1.416 4.991 H41 N30 38
N30 HO41 HO41 H 0 0 N N N N N N 19.267 11.735 1.644 0.669 -3.199 5.828 HO41 N30 39
N30 H51 H51 H 0 1 N N N N N N 21.444 10.126 3.184 -0.415 -3.092 2.426 H51 N30 40
N30 H611 1H61 H 0 0 N N N N N N 20.961 12.920 4.200 -2.473 -1.686 4.159 H611 N30 41
N30 H612 2H61 H 0 0 N N N N N N 20.924 12.536 2.427 -2.187 -3.444 4.079 H612 N30 42
N30 HO61 HO61 H 0 0 N N N N N N 22.978 12.285 2.463 -2.379 -2.527 1.604 HO61 N30 43
N30 H12 H12 H 0 1 N N N N N N 24.242 5.352 6.605 3.673 -3.105 -2.275 H12 N30 44
N30 H121 1H12 H 0 0 N N N N N N 26.612 5.920 7.215 2.324 -1.526 -4.044 H121 N30 45
N30 H122 2H12 H 0 0 N N N N N N 25.994 6.720 8.498 1.752 -3.177 -4.057 H122 N30 46
N30 H221 1H22 H 0 0 N N N N N N 25.638 6.863 5.209 1.565 -4.435 -2.019 H221 N30 47
N30 H222 2H22 H 0 0 N N N N N N 25.257 8.238 6.282 2.207 -3.789 -0.529 H222 N30 48
N30 H32 H32 H 0 1 N N N N N N 23.210 6.527 4.734 -0.155 -3.509 -0.449 H32 N30 49
N30 H321 1H32 H 0 0 N N N N N N 23.754 9.382 4.291 -0.747 -1.811 -2.616 H321 N30 50
N30 H322 2H32 H 0 0 N N N N N N 24.565 8.219 3.481 -0.866 -3.552 -2.708 H322 N30 51
N30 H42 H42 H 0 1 N N N N N N 22.817 9.066 6.440 -0.411 -0.976 -0.367 H42 N30 52
N30 H52 H52 H 0 1 N N N N N N 21.693 6.278 7.038 1.755 0.315 -0.569 H52 N30 53
N30 H62 H62 H 0 1 N N N N N N 23.909 7.814 8.442 3.461 -0.567 -2.216 H62 N30 54
N30 HO62 HO62 H 0 0 N N N N N N 23.313 5.011 8.652 3.256 -2.202 0.059 HO62 N30 55
N30 H13 H13 H 0 1 N N N N N N 21.422 6.780 9.757 1.796 1.823 -2.240 H13 N30 56
N30 H23 H23 H 0 1 N N N N N N 19.995 9.494 9.950 0.251 1.303 -4.479 H23 N30 57
N30 HO23 HO23 H 0 0 N N N N N N 21.959 8.908 11.041 0.350 3.677 -2.937 HO23 N30 58
N30 H33 H33 H 0 1 N N N N N N 18.181 8.407 11.278 -1.710 0.688 -3.154 H33 N30 59
N30 HO33 HO33 H 0 0 N N N N N N 19.272 5.845 11.260 -2.925 1.914 -4.276 HO33 N30 60
N30 H43 H43 H 0 1 N N N N N N 17.553 6.412 9.657 -1.339 3.290 -1.582 H43 N30 61
N30 H531 1H53 H 0 0 N N N N N N 17.204 7.697 7.665 -2.282 0.526 -0.767 H531 N30 62
N30 H532 2H53 H 0 0 N N N N N N 18.278 9.007 8.279 -3.343 1.910 -1.121 H532 N30 63
N30 HN1 HN1 H 0 1 N N N N N N 16.737 8.909 10.232 -1.930 1.430 1.308 HN1 N30 64
N30 HN2 HN2 H 0 1 N N N N N N 16.243 9.658 8.867 -2.549 2.994 0.835 HN2 N30 65
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
N30 C11 C21 SING N N 1
N30 C11 O51 SING N N 2
N30 C11 O11 SING N N 3
N30 C11 H11 SING N N 4
N30 O11 C42 SING N N 5
N30 C21 C31 SING N N 6
N30 C21 N21 SING N N 7
N30 C21 H21 SING N N 8
N30 N21 H211 SING N N 9
N30 N21 H212 SING N N 10
N30 C31 O31 SING N N 11
N30 C31 C41 SING N N 12
N30 C31 H31 SING N N 13
N30 O31 HO31 SING N N 14
N30 C41 O41 SING N N 15
N30 C41 C51 SING N N 16
N30 C41 H41 SING N N 17
N30 O41 HO41 SING N N 18
N30 C51 C61 SING N N 19
N30 C51 O51 SING N N 20
N30 C51 H51 SING N N 21
N30 C61 O61 SING N N 22
N30 C61 H611 SING N N 23
N30 C61 H612 SING N N 24
N30 O61 HO61 SING N N 25
N30 C12 C22 SING N N 26
N30 C12 N12 SING N N 27
N30 C12 C62 SING N N 28
N30 C12 H12 SING N N 29
N30 N12 H121 SING N N 30
N30 N12 H122 SING N N 31
N30 C22 C32 SING N N 32
N30 C22 H221 SING N N 33
N30 C22 H222 SING N N 34
N30 C32 N32 SING N N 35
N30 C32 C42 SING N N 36
N30 C32 H32 SING N N 37
N30 N32 H321 SING N N 38
N30 N32 H322 SING N N 39
N30 C42 C52 SING N N 40
N30 C42 H42 SING N N 41
N30 C52 C62 SING N N 42
N30 C52 O52 SING N N 43
N30 C52 H52 SING N N 44
N30 O52 C13 SING N N 45
N30 C62 O62 SING N N 46
N30 C62 H62 SING N N 47
N30 O62 HO62 SING N N 48
N30 C13 O43 SING N N 49
N30 C13 C23 SING N N 50
N30 C13 H13 SING N N 51
N30 C23 C33 SING N N 52
N30 C23 O23 SING N N 53
N30 C23 H23 SING N N 54
N30 O23 HO23 SING N N 55
N30 C33 C43 SING N N 56
N30 C33 O33 SING N N 57
N30 C33 H33 SING N N 58
N30 O33 HO33 SING N N 59
N30 C43 C53 SING N N 60
N30 C43 O43 SING N N 61
N30 C43 H43 SING N N 62
N30 C53 N53 SING N N 63
N30 C53 H531 SING N N 64
N30 C53 H532 SING N N 65
N30 N53 HN1 SING N N 66
N30 N53 HN2 SING N N 67
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
N30 SMILES ACDLabs 10.04 O(C2C(OC1OC(CO)C(O)C(O)C1N)C(N)CC(N)C2O)C3OC(C(O)C3O)CN
N30 SMILES_CANONICAL CACTVS 3.341 NC[C@H]1O[C@@H](O[C@@H]2[C@@H](O)[C@H](N)C[C@H](N)[C@H]2O[C@H]3O[C@H](CO)[C@@H](O)[C@H](O)[C@H]3N)[C@H](O)[C@@H]1O
N30 SMILES CACTVS 3.341 NC[CH]1O[CH](O[CH]2[CH](O)[CH](N)C[CH](N)[CH]2O[CH]3O[CH](CO)[CH](O)[CH](O)[CH]3N)[CH](O)[CH]1O
N30 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 C1[C@H]([C@@H]([C@H]([C@@H]([C@H]1N)O[C@@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)N)O[C@H]3[C@@H]([C@@H]([C@H](O3)CN)O)O)O)N
N30 SMILES "OpenEye OEToolkits" 1.5.0 C1C(C(C(C(C1N)OC2C(C(C(C(O2)CO)O)O)N)OC3C(C(C(O3)CN)O)O)O)N
N30 InChI InChI 1.03 InChI=1S/C17H34N4O10/c18-2-6-10(24)13(27)17(28-6)31-15-9(23)4(19)1-5(20)14(15)30-16-8(21)12(26)11(25)7(3-22)29-16/h4-17,22-27H,1-3,18-21H2/t4-,5+,6-,7-,8-,9+,10-,11-,12-,13-,14-,15-,16-,17+/m1/s1
N30 InChIKey InChI 1.03 FNBQIDOUCINBIA-VVPCINPTSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
N30 "SYSTEMATIC NAME" ACDLabs 10.04 "(1R,2R,3S,4R,6S)-4,6-diamino-2-[(5-amino-5-deoxy-beta-D-ribofuranosyl)oxy]-3-hydroxycyclohexyl 2-amino-2-deoxy-alpha-D-glucopyranoside"
N30 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 (2R,3S,4R,5R,6S)-5-amino-6-[(1R,2R,3S,4R,6S)-4,6-diamino-2-[(2S,3R,4S,5R)-5-(aminomethyl)-3,4-dihydroxy-oxolan-2-yl]oxy-3-hydroxy-cyclohexyl]oxy-2-(hydroxymethyl)oxane-3,4-diol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
N30 'Create component' 2007-01-12 RCSB
N30 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
N30 C11 C 9.002 -1.268 1
N30 O11 O 10.301 -0.518 2
N30 C21 C 9.002 -2.768 3
N30 N21 N 10.301 -3.518 4
N30 C31 C 7.702 -3.518 5
N30 O31 O 7.702 -5.018 6
N30 C41 C 6.404 -2.768 7
N30 O41 O 5.104 -3.518 8
N30 C51 C 6.404 -1.268 9
N30 O51 O 7.702 -0.518 10
N30 C61 C 5.104 -0.518 11
N30 O61 O 3.805 -1.268 12
N30 C12 C 12.551 3.379 13
N30 N12 N 13.301 4.678 14
N30 C22 C 11.051 3.379 15
N30 C32 C 10.301 2.080 16
N30 N32 N 8.801 2.080 17
N30 C42 C 11.051 0.781 18
N30 C52 C 12.551 0.781 19
N30 O52 O 13.301 -0.518 20
N30 C62 C 13.301 2.080 21
N30 O62 O 14.801 2.080 22
N30 C13 C 14.801 -0.518 23
N30 C23 C 15.682 -1.732 24
N30 O23 O 15.219 -3.158 25
N30 C33 C 17.109 -1.268 26
N30 O33 O 18.322 -2.150 27
N30 C43 C 17.109 0.232 28
N30 O43 O 15.682 0.695 29
N30 C53 C 18.322 1.113 30
N30 N53 N 19.693 0.503 31
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
N30 C11 C21 SINGLE NONE 1
N30 C11 O51 SINGLE NONE 2
N30 C11 O11 SINGLE BEGINDASH 3
N30 C42 O11 SINGLE BEGINDASH 4
N30 C21 C31 SINGLE NONE 5
N30 C21 N21 SINGLE BEGINDASH 6
N30 C31 O31 SINGLE BEGINWEDGE 7
N30 C31 C41 SINGLE NONE 8
N30 C41 O41 SINGLE BEGINDASH 9
N30 C41 C51 SINGLE NONE 10
N30 C51 C61 SINGLE BEGINWEDGE 11
N30 C51 O51 SINGLE NONE 12
N30 C61 O61 SINGLE NONE 13
N30 C12 C22 SINGLE NONE 14
N30 C12 N12 SINGLE BEGINWEDGE 15
N30 C12 C62 SINGLE NONE 16
N30 C22 C32 SINGLE NONE 17
N30 C32 N32 SINGLE BEGINWEDGE 18
N30 C32 C42 SINGLE NONE 19
N30 C42 C52 SINGLE NONE 20
N30 C52 C62 SINGLE NONE 21
N30 C52 O52 SINGLE BEGINWEDGE 22
N30 C13 O52 SINGLE BEGINDASH 23
N30 C62 O62 SINGLE BEGINDASH 24
N30 C13 O43 SINGLE NONE 25
N30 C13 C23 SINGLE NONE 26
N30 C23 C33 SINGLE NONE 27
N30 C23 O23 SINGLE BEGINWEDGE 28
N30 C33 C43 SINGLE NONE 29
N30 C33 O33 SINGLE BEGINWEDGE 30
N30 C43 C53 SINGLE BEGINDASH 31
N30 C43 O43 SINGLE NONE 32
N30 C53 N53 SINGLE NONE 33
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
N30 MurckoScaffold S1 scaffold 'C1CC[C@@H](O[C@@H]2CCCC[C@H]2O[C@H]2CCCO2)OC1' InChI=1S/C15H26O4/c1-2-7-13(19-15-9-5-11-17-15)12(6-1)18-14-8-3-4-10-16-14/h12-15H,1-11H2/t12-,13-,14-,15+/m1/s1 QHKOMLCENKQGLA-TUVASFSCSA-N
N30 cyclohexane F1 fragment C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
N30 furanose F2 fragment OC1CCCO1 InChI=1S/C4H8O2/c5-4-2-1-3-6-4/h4-5H,1-3H2 JNODDICFTDYODH-UHFFFAOYSA-N
N30 pyranose F3 fragment OC1CCCCO1 InChI=1S/C5H10O2/c6-5-3-1-2-4-7-5/h5-6H,1-4H2 CELWCAITJAEQNL-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
N30 C11 S1 1
N30 O11 S1 1
N30 C21 S1 1
N30 C31 S1 1
N30 C41 S1 1
N30 C51 S1 1
N30 O51 S1 1
N30 C12 S1 1
N30 C22 S1 1
N30 C32 S1 1
N30 C42 S1 1
N30 C52 S1 1
N30 O52 S1 1
N30 C62 S1 1
N30 C13 S1 1
N30 C23 S1 1
N30 C33 S1 1
N30 C43 S1 1
N30 O43 S1 1
N30 C12 F1 1
N30 C22 F1 1
N30 C32 F1 1
N30 C42 F1 1
N30 C52 F1 1
N30 C62 F1 1
N30 C33 F2 1
N30 C43 F2 1
N30 O43 F2 1
N30 C13 F2 1
N30 C23 F2 1
N30 O52 F2 1
N30 C41 F3 1
N30 C51 F3 1
N30 O51 F3 1
N30 C11 F3 1
N30 C21 F3 1
N30 C31 F3 1
N30 O11 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id N30
_pdbe_chem_comp_rdkit_properties.exactmw 454.227
_pdbe_chem_comp_rdkit_properties.amw 454.477
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 14
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 14
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 16
_pdbe_chem_comp_rdkit_properties.NumHBD 10
_pdbe_chem_comp_rdkit_properties.NumHBA 14
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 31
_pdbe_chem_comp_rdkit_properties.NumAtoms 65
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 14
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 3
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 14
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 226.893
_pdbe_chem_comp_rdkit_properties.tpsa 262.380
_pdbe_chem_comp_rdkit_properties.CrippenClogP -6.652
_pdbe_chem_comp_rdkit_properties.CrippenMR 101.785
_pdbe_chem_comp_rdkit_properties.chi0v 14.371
_pdbe_chem_comp_rdkit_properties.chi1v 7.502
_pdbe_chem_comp_rdkit_properties.chi2v 3.471
_pdbe_chem_comp_rdkit_properties.chi3v 3.471
_pdbe_chem_comp_rdkit_properties.chi4v 2.066
_pdbe_chem_comp_rdkit_properties.chi0n 48.371
_pdbe_chem_comp_rdkit_properties.chi1n 23.529
_pdbe_chem_comp_rdkit_properties.chi2n 3.471
_pdbe_chem_comp_rdkit_properties.chi3n 3.471
_pdbe_chem_comp_rdkit_properties.chi4n 2.066
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.560
_pdbe_chem_comp_rdkit_properties.kappa1 5.977
_pdbe_chem_comp_rdkit_properties.kappa2 10.148
_pdbe_chem_comp_rdkit_properties.kappa3 4.874
_pdbe_chem_comp_rdkit_properties.Phi 1.957
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
N30 UniChem ZINC ZINC000044018455
N30 UniChem 'PubChem TPHARMA' 26738657
N30 UniChem Nikkaji J3.355.749C
N30 UniChem PubChem 16750529
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
N30 C11 1.353 0.486 0.213 ETKDGv3 1
N30 O11 0.877 0.789 -1.089 ETKDGv3 2
N30 C21 1.932 1.765 0.904 ETKDGv3 3
N30 N21 2.286 2.794 -0.081 ETKDGv3 4
N30 C31 3.167 1.388 1.748 ETKDGv3 5
N30 O31 2.764 0.537 2.791 ETKDGv3 6
N30 C41 4.232 0.685 0.870 ETKDGv3 7
N30 O41 5.069 1.660 0.299 ETKDGv3 8
N30 C51 3.561 -0.153 -0.255 ETKDGv3 9
N30 O51 2.282 -0.592 0.164 ETKDGv3 10
N30 C61 4.398 -1.388 -0.620 ETKDGv3 11
N30 O61 5.645 -1.018 -1.143 ETKDGv3 12
N30 C12 -2.053 -1.507 -3.184 ETKDGv3 13
N30 N12 -2.221 -2.727 -2.386 ETKDGv3 14
N30 C22 -0.614 -1.428 -3.755 ETKDGv3 15
N30 C32 0.255 -0.319 -3.117 ETKDGv3 16
N30 N32 1.675 -0.545 -3.402 ETKDGv3 17
N30 C42 0.027 -0.229 -1.596 ETKDGv3 18
N30 C52 -1.455 0.103 -1.245 ETKDGv3 19
N30 O52 -1.810 -0.619 -0.075 ETKDGv3 20
N30 C62 -2.458 -0.241 -2.389 ETKDGv3 21
N30 O62 -2.562 0.841 -3.280 ETKDGv3 22
N30 C13 -2.734 0.095 0.728 ETKDGv3 23
N30 C23 -3.622 -0.893 1.467 ETKDGv3 24
N30 O23 -4.785 -1.195 0.741 ETKDGv3 25
N30 C33 -3.934 -0.158 2.740 ETKDGv3 26
N30 O33 -5.063 0.663 2.569 ETKDGv3 27
N30 C43 -2.681 0.704 2.932 ETKDGv3 28
N30 O43 -2.036 0.865 1.682 ETKDGv3 29
N30 C53 -1.709 0.054 3.938 ETKDGv3 30
N30 N53 -0.541 0.896 4.187 ETKDGv3 31
N30 H11 0.508 0.152 0.856 ETKDGv3 32
N30 H21 1.159 2.191 1.584 ETKDGv3 33
N30 H211 2.705 3.610 0.422 ETKDGv3 34
N30 H212 1.404 3.160 -0.507 ETKDGv3 35
N30 H31 3.599 2.318 2.190 ETKDGv3 36
N30 HO31 3.479 0.562 3.479 ETKDGv3 37
N30 H41 4.835 0.023 1.538 ETKDGv3 38
N30 HO41 5.950 1.233 0.139 ETKDGv3 39
N30 H51 3.466 0.462 -1.181 ETKDGv3 40
N30 H611 3.847 -2.011 -1.361 ETKDGv3 41
N30 H612 4.559 -2.017 0.282 ETKDGv3 42
N30 HO61 5.481 -0.693 -2.067 ETKDGv3 43
N30 H12 -2.750 -1.590 -4.049 ETKDGv3 44
N30 H121 -3.209 -2.785 -2.049 ETKDGv3 45
N30 H122 -1.599 -2.698 -1.547 ETKDGv3 46
N30 H221 -0.114 -2.415 -3.639 ETKDGv3 47
N30 H222 -0.668 -1.234 -4.849 ETKDGv3 48
N30 H32 -0.027 0.659 -3.567 ETKDGv3 49
N30 H321 1.811 -0.562 -4.439 ETKDGv3 50
N30 H322 1.962 -1.480 -3.032 ETKDGv3 51
N30 H42 0.285 -1.235 -1.184 ETKDGv3 52
N30 H52 -1.500 1.207 -1.068 ETKDGv3 53
N30 H62 -3.467 -0.428 -1.953 ETKDGv3 54
N30 HO62 -3.114 1.534 -2.832 ETKDGv3 55
N30 H13 -3.391 0.777 0.135 ETKDGv3 56
N30 H23 -3.058 -1.825 1.711 ETKDGv3 57
N30 HO23 -4.509 -1.814 0.016 ETKDGv3 58
N30 H33 -4.107 -0.880 3.573 ETKDGv3 59
N30 HO33 -5.336 0.959 3.476 ETKDGv3 60
N30 H43 -2.968 1.706 3.319 ETKDGv3 61
N30 H531 -1.370 -0.933 3.555 ETKDGv3 62
N30 H532 -2.232 -0.116 4.904 ETKDGv3 63
N30 HN1 -0.861 1.843 4.495 ETKDGv3 64
N30 HN2 -0.011 1.010 3.295 ETKDGv3 65
#