Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : MMP

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 83


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 -3.175 -1.175 2.936
2 N1 N N1 N Y N 0 -1.803 -0.757 2.614
3 C11 C C11 N Y N 0 -1.42 0.527 2.938
4 C12 C C12 N Y N 0 -0.621 0.981 1.905
5 C13 C C13 N Y N 0 -0.535 -0.044 0.939
6 C14 C C14 N Y N 0 -1.282 -1.117 1.389
7 C15 C C15 N Y N 0 -1.569 -2.358 0.763
8 C16 C C16 N N N 0 0.02 2.312 1.813
9 C17 C C17 N N N 0 0.211 0.031 -0.337
10 C18 C C18 N N N 0 1.659 -0.448 -0.205
11 N2 N N2 N Y N 0 -2.249 -3.656 2.701
12 C21 C C21 N Y N 0 -2.004 -3.479 1.36
13 C22 C C22 N N N 0 -2.271 -4.742 0.683
14 C23 C C23 N N N 0 -2.663 -5.667 1.57
15 C24 C C24 N Y N 0 -2.624 -4.896 2.83
16 C25 C C25 N Y N 0 -2.984 -5.586 4.093
17 C26 C C26 N N N 0 -2.113 -4.918 -0.791
18 C27 C C27 N N N 0 -3.056 -7.085 1.414
19 C28 C C28 N N N 0 -1.85 -8.0 1.541
20 N3 N N3 N Y N 0 -3.04 -3.578 5.498
21 C31 C C31 N Y N 0 -3.149 -4.921 5.245
22 C32 C C32 N Y N 0 -3.505 -5.528 6.537
23 C33 C C33 N Y N 0 -3.587 -4.544 7.464
24 C34 C C34 N Y N 0 -3.288 -3.262 6.809
25 C35 C C35 N Y N 0 -3.278 -2.065 7.412
26 C36 C C36 N N N 0 -3.722 -6.993 6.708
27 C37 C C37 N N N 0 -3.918 -4.653 8.913
28 C38 C C38 N N N 0 -2.653 -4.862 9.733
29 C39 C C39 N N N 0 -2.974 -5.034 11.197
30 O31 O O31 N N N 0 -1.865 -5.211 11.957
31 O32 O O32 N N N 0 -4.108 -4.999 11.658
32 N4 N N4 N Y N 0 -2.494 -0.723 5.466
33 C41 C C41 N Y N 0 -2.964 -0.815 6.676
34 C42 C C42 N N N 0 -3.177 0.477 7.36
35 C43 C C43 N N N 0 -2.78 1.343 6.417
36 C44 C C44 N Y N 0 -2.346 0.624 5.226
37 C45 C C45 N Y N 0 -1.866 1.194 4.11
38 C46 C C46 N N N 0 -2.762 2.832 6.514
39 C47 C C47 N N N 0 -3.707 0.677 8.728
40 C48 C C48 N N N 0 -2.577 0.689 9.751
41 C49 C C49 N N N 0 -3.112 0.837 11.154
42 O41 O O41 N N N 0 -2.128 0.871 12.087
43 O42 O O42 N N N 0 -4.302 0.937 11.426
44 H11 H 1H1 N N N 0 -3.139 -1.782 3.844
45 H12 H 2H1 N N N 0 -3.798 -0.29 3.092
46 H13 H 3H1 N N N 0 -3.581 -1.756 2.103
47 H15 H H15 N N N 0 -1.385 -2.384 -0.309
48 H161 H 1H16 N N N 0 0.729 2.349 0.971
49 H162 H 2H16 N N N 0 -0.721 3.115 1.667
50 H163 H 3H16 N N N 0 0.573 2.565 2.732
51 H171 H 1H17 N N N 0 -0.287 -0.567 -1.122
52 H172 H 2H17 N N N 0 0.217 1.064 -0.731
53 H181 H 1H18 N N N 0 2.205 0.16 0.525
54 H182 H 2H18 N N N 0 2.185 -0.382 -1.162
55 H183 H 3H18 N N N 0 1.695 -1.49 0.131
56 H25 H H25 N N N 0 -3.111 -6.662 4.056
57 H261 H 1H26 N N N 0 -1.72 -5.912 -1.004
58 H262 H 2H26 N N N 0 -1.425 -4.168 -1.182
59 H263 H 3H26 N N N 0 -3.079 -4.8 -1.283
60 H271 H 1H27 N N N 0 -3.803 -7.338 2.178
61 H272 H 2H27 N N N 0 -3.523 -7.215 0.429
62 H281 H 1H28 N N N 0 -2.143 -9.049 1.432
63 H282 H 2H28 N N N 0 -1.37 -7.877 2.517
64 H283 H 3H28 N N N 0 -1.104 -7.771 0.773
65 HN3 H HN3 N N N 0 -2.788 -2.898 4.799
66 H35 H H35 N N N 0 -3.505 -1.979 8.468
67 H361 H 1H36 N N N 0 -3.485 -7.287 7.731
68 H371 H 1H37 N N N 0 -4.576 -5.522 9.027
69 H362 H 2H36 N N N 0 -3.083 -7.548 6.02
70 H363 H 3H36 N N N 0 -4.763 -7.242 6.497
71 H372 H 2H37 N N N 0 -4.466 -3.756 9.219
72 H381 H 1H38 N N N 0 -2.153 -5.784 9.413
73 H382 H 2H38 N N N 0 -1.921 -4.056 9.605
74 HO31 H HO31 N N N 0 -2.029 -5.311 12.919
75 H45 H H45 N N N 0 -1.775 2.278 4.084
76 H461 H 1H46 N N N 0 -2.167 3.249 5.701
77 H462 H 2H46 N N N 0 -2.33 3.137 7.468
78 H463 H 3H46 N N N 0 -3.78 3.219 6.449
79 H471 H 1H47 N N N 0 -4.382 -0.162 8.946
80 H472 H 2H47 N N N 0 -4.293 1.606 8.758
81 H481 H 1H48 N N N 0 -2.036 -0.265 9.724
82 H482 H 2H48 N N N 0 -1.833 1.469 9.553
83 HO41 H HO41 N N N 0 -2.434 0.983 13.013