data_MMP
#
_chem_comp.id MMP
_chem_comp.name N-METHYLMESOPORPHYRIN
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C35 H40 N4 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 580.716
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code MMP
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1C1H
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
MMP C1 C1 C 0 1 N N N N N N 16.199 18.946 12.002 -3.175 -1.175 2.936 C1 MMP 1
MMP N1 N1 N 0 1 Y N N N N N 14.910 19.626 11.541 -1.803 -0.757 2.614 N1 MMP 2
MMP C11 C11 C 0 1 Y N N N N N 13.712 19.252 12.143 -1.420 0.527 2.938 C11 MMP 3
MMP C12 C12 C 0 1 Y N N N N N 12.919 20.454 12.365 -0.621 0.981 1.905 C12 MMP 4
MMP C13 C13 C 0 1 Y N N N N N 13.633 21.511 11.910 -0.535 -0.044 0.939 C13 MMP 5
MMP C14 C14 C 0 1 Y N N N N N 14.901 21.007 11.383 -1.282 -1.117 1.389 C14 MMP 6
MMP C15 C15 C 0 1 Y N N N N N 15.907 21.764 10.800 -1.569 -2.358 0.763 C15 MMP 7
MMP C16 C16 C 0 1 N N N N N N 11.529 20.488 13.000 0.020 2.312 1.813 C16 MMP 8
MMP C17 C17 C 0 1 N N N N N N 13.364 22.981 12.189 0.211 0.031 -0.337 C17 MMP 9
MMP C18 C18 C 0 1 N N N N N N 13.614 23.341 13.653 1.659 -0.448 -0.205 C18 MMP 10
MMP N2 N2 N 0 1 Y N N N N N 16.789 20.135 9.229 -2.249 -3.656 2.701 N2 MMP 11
MMP C21 C21 C 0 1 Y N N N N N 16.809 21.382 9.816 -2.004 -3.479 1.360 C21 MMP 12
MMP C22 C22 C 0 1 N N N N N N 17.865 22.148 9.205 -2.271 -4.742 0.683 C22 MMP 13
MMP C23 C23 C 0 1 N N N N N N 18.464 21.362 8.292 -2.663 -5.667 1.570 C23 MMP 14
MMP C24 C24 C 0 1 Y N N N N N 17.788 20.090 8.289 -2.624 -4.896 2.830 C24 MMP 15
MMP C25 C25 C 0 1 Y N N N N N 18.017 19.002 7.474 -2.984 -5.586 4.093 C25 MMP 16
MMP C26 C26 C 0 1 N N N N N N 18.216 23.586 9.574 -2.113 -4.918 -0.791 C26 MMP 17
MMP C27 C27 C 0 1 N N N N N N 19.534 21.793 7.299 -3.056 -7.085 1.414 C27 MMP 18
MMP C28 C28 C 0 1 N N N N N N 20.807 20.990 7.449 -1.850 -8.000 1.541 C28 MMP 19
MMP N3 N3 N 0 1 Y N N N N N 16.279 17.480 8.235 -3.040 -3.578 5.498 N3 MMP 20
MMP C31 C31 C 0 1 Y N N N N N 17.279 17.854 7.351 -3.149 -4.921 5.245 C31 MMP 21
MMP C32 C32 C 0 1 Y N N N N N 17.410 16.841 6.343 -3.505 -5.528 6.537 C32 MMP 22
MMP C33 C33 C 0 1 Y N N N N N 16.524 15.895 6.639 -3.587 -4.544 7.464 C33 MMP 23
MMP C34 C34 C 0 1 Y N N N N N 15.789 16.267 7.829 -3.288 -3.262 6.809 C34 MMP 24
MMP C35 C35 C 0 1 Y N N N N N 14.785 15.568 8.458 -3.278 -2.065 7.412 C35 MMP 25
MMP C36 C36 C 0 1 N N N N N N 18.377 16.883 5.169 -3.722 -6.993 6.708 C36 MMP 26
MMP C37 C37 C 0 1 N N N N N N 16.224 14.598 5.892 -3.918 -4.653 8.913 C37 MMP 27
MMP C38 C38 C 0 1 N N N N N N 17.211 13.488 6.179 -2.653 -4.862 9.733 C38 MMP 28
MMP C39 C39 C 0 1 N N N N N N 16.866 12.223 5.435 -2.974 -5.034 11.197 C39 MMP 29
MMP O31 O31 O 0 1 N N N N N N 16.563 12.307 4.221 -1.865 -5.211 11.957 O31 MMP 30
MMP O32 O32 O 0 1 N N N N N N 16.896 11.141 6.055 -4.108 -4.999 11.658 O32 MMP 31
MMP N4 N4 N 0 1 Y N N N N N 14.291 16.983 10.358 -2.494 -0.723 5.466 N4 MMP 32
MMP C41 C41 C 0 1 Y N N N N N 14.126 15.837 9.638 -2.964 -0.815 6.676 C41 MMP 33
MMP C42 C42 C 0 1 N N N N N N 13.177 14.988 10.312 -3.177 0.477 7.360 C42 MMP 34
MMP C43 C43 C 0 1 N N N N N N 12.781 15.640 11.441 -2.780 1.343 6.417 C43 MMP 35
MMP C44 C44 C 0 1 Y N N N N N 13.476 16.908 11.473 -2.346 0.624 5.226 C44 MMP 36
MMP C45 C45 C 0 1 Y N N N N N 13.361 17.930 12.396 -1.866 1.194 4.110 C45 MMP 37
MMP C46 C46 C 0 1 N N N N N N 11.816 15.122 12.481 -2.762 2.832 6.514 C46 MMP 38
MMP C47 C47 C 0 1 N N N N N N 12.648 13.671 9.790 -3.707 0.677 8.728 C47 MMP 39
MMP C48 C48 C 0 1 N N N N N N 11.288 13.900 9.132 -2.577 0.689 9.751 C48 MMP 40
MMP C49 C49 C 0 1 N N N N N N 10.676 12.628 8.594 -3.112 0.837 11.154 C49 MMP 41
MMP O41 O41 O 0 1 N N N N N N 10.841 12.350 7.385 -2.128 0.871 12.087 O41 MMP 42
MMP O42 O42 O 0 1 N N N N N N 10.037 11.898 9.381 -4.302 0.937 11.426 O42 MMP 43
MMP H11 1H1 H 0 1 N N N N N N 17.158 19.245 11.519 -3.139 -1.782 3.844 H11 MMP 44
MMP H12 2H1 H 0 1 N N N N N N 16.296 19.063 13.106 -3.798 -0.290 3.092 H12 MMP 45
MMP H13 3H1 H 0 1 N N N N N N 16.078 17.841 11.913 -3.581 -1.756 2.103 H13 MMP 46
MMP H15 H15 H 0 1 N N N N N N 16.001 22.800 11.164 -1.385 -2.384 -0.309 H15 MMP 47
MMP H161 1H16 H 0 0 N N N N N N 10.922 21.407 13.169 0.729 2.349 0.971 H161 MMP 48
MMP H162 2H16 H 0 0 N N N N N N 10.891 19.788 12.410 -0.721 3.115 1.667 H162 MMP 49
MMP H163 3H16 H 0 0 N N N N N N 11.615 19.975 13.986 0.573 2.565 2.732 H163 MMP 50
MMP H171 1H17 H 0 0 N N N N N N 13.951 23.636 11.505 -0.287 -0.567 -1.122 H171 MMP 51
MMP H172 2H17 H 0 0 N N N N N N 12.335 23.271 11.870 0.217 1.064 -0.731 H172 MMP 52
MMP H181 1H18 H 0 0 N N N N N N 13.416 24.419 13.857 2.205 0.160 0.525 H181 MMP 53
MMP H182 2H18 H 0 0 N N N N N N 13.026 22.685 14.337 2.185 -0.382 -1.162 H182 MMP 54
MMP H183 3H18 H 0 0 N N N N N N 14.642 23.050 13.971 1.695 -1.490 0.131 H183 MMP 55
MMP H25 H25 H 0 1 N N N N N N 18.912 19.057 6.832 -3.111 -6.662 4.056 H25 MMP 56
MMP H261 1H26 H 0 0 N N N N N N 19.033 24.178 9.101 -1.720 -5.912 -1.004 H261 MMP 57
MMP H262 2H26 H 0 0 N N N N N N 17.280 24.184 9.470 -1.425 -4.168 -1.182 H262 MMP 58
MMP H263 3H26 H 0 0 N N N N N N 18.398 23.602 10.673 -3.079 -4.800 -1.283 H263 MMP 59
MMP H271 1H27 H 0 0 N N N N N N 19.152 21.753 6.252 -3.803 -7.338 2.178 H271 MMP 60
MMP H272 2H27 H 0 0 N N N N N N 19.735 22.887 7.372 -3.523 -7.215 0.429 H272 MMP 61
MMP H281 1H28 H 0 0 N N N N N N 21.590 21.305 6.721 -2.143 -9.049 1.432 H281 MMP 62
MMP H282 2H28 H 0 0 N N N N N N 21.188 21.029 8.496 -1.370 -7.877 2.517 H282 MMP 63
MMP H283 3H28 H 0 0 N N N N N N 20.605 19.895 7.375 -1.104 -7.771 0.773 H283 MMP 64
MMP HN3 HN3 H 0 1 N N N N N N 15.551 18.188 8.330 -2.788 -2.898 4.799 HN3 MMP 65
MMP H35 H35 H 0 1 N N N N N N 14.458 14.652 7.936 -3.505 -1.979 8.468 H35 MMP 66
MMP H361 1H36 H 0 0 N N N N N N 18.478 16.095 4.385 -3.485 -7.287 7.731 H361 MMP 67
MMP H362 2H36 H 0 0 N N N N N N 18.185 17.841 4.633 -3.083 -7.548 6.020 H362 MMP 68
MMP H363 3H36 H 0 0 N N N N N N 19.393 17.035 5.600 -4.763 -7.242 6.497 H363 MMP 69
MMP H371 1H37 H 0 0 N N N N N N 15.181 14.259 6.095 -4.576 -5.522 9.027 H371 MMP 70
MMP H372 2H37 H 0 0 N N N N N N 16.149 14.784 4.795 -4.466 -3.756 9.219 H372 MMP 71
MMP H381 1H38 H 0 0 N N N N N N 18.257 13.810 5.966 -2.153 -5.784 9.413 H381 MMP 72
MMP H382 2H38 H 0 0 N N N N N N 17.304 13.301 7.274 -1.921 -4.056 9.605 H382 MMP 73
MMP HO31 HO31 H 0 0 N N N N N N 16.345 11.509 3.752 -2.029 -5.311 12.919 HO31 MMP 74
MMP H45 H45 H 0 1 N N N N N N 12.965 17.675 13.393 -1.775 2.278 4.084 H45 MMP 75
MMP H461 1H46 H 0 0 N N N N N N 11.491 15.655 13.404 -2.167 3.249 5.701 H461 MMP 76
MMP H462 2H46 H 0 0 N N N N N N 10.883 14.849 11.934 -2.330 3.137 7.468 H462 MMP 77
MMP H463 3H46 H 0 0 N N N N N N 12.214 14.135 12.813 -3.780 3.219 6.449 H463 MMP 78
MMP H471 1H47 H 0 0 N N N N N N 13.369 13.166 9.105 -4.382 -0.162 8.946 H471 MMP 79
MMP H472 2H47 H 0 0 N N N N N N 12.608 12.887 10.582 -4.293 1.606 8.758 H472 MMP 80
MMP H481 1H48 H 0 0 N N N N N N 10.588 14.415 9.830 -2.036 -0.265 9.724 H481 MMP 81
MMP H482 2H48 H 0 0 N N N N N N 11.355 14.678 8.336 -1.833 1.469 9.553 H482 MMP 82
MMP HO41 HO41 H 0 0 N N N N N N 10.456 11.550 7.046 -2.434 0.983 13.013 HO41 MMP 83
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
MMP C1 N1 SING N N 1
MMP C1 H11 SING N N 2
MMP C1 H12 SING N N 3
MMP C1 H13 SING N N 4
MMP N1 C11 SING Y N 5
MMP N1 C14 SING Y N 6
MMP C11 C12 DOUB Y N 7
MMP C11 C45 SING Y N 8
MMP C12 C13 SING Y N 9
MMP C12 C16 SING N N 10
MMP C13 C14 DOUB Y N 11
MMP C13 C17 SING N N 12
MMP C14 C15 SING Y N 13
MMP C15 C21 DOUB Y Z 14
MMP C15 H15 SING N N 15
MMP C16 H161 SING N N 16
MMP C16 H162 SING N N 17
MMP C16 H163 SING N N 18
MMP C17 C18 SING N N 19
MMP C17 H171 SING N N 20
MMP C17 H172 SING N N 21
MMP C18 H181 SING N N 22
MMP C18 H182 SING N N 23
MMP C18 H183 SING N N 24
MMP N2 C21 SING Y N 25
MMP N2 C24 DOUB Y N 26
MMP C21 C22 SING N N 27
MMP C22 C23 DOUB N N 28
MMP C22 C26 SING N N 29
MMP C23 C24 SING N N 30
MMP C23 C27 SING N N 31
MMP C24 C25 SING Y N 32
MMP C25 C31 DOUB Y Z 33
MMP C25 H25 SING N N 34
MMP C26 H261 SING N N 35
MMP C26 H262 SING N N 36
MMP C26 H263 SING N N 37
MMP C27 C28 SING N N 38
MMP C27 H271 SING N N 39
MMP C27 H272 SING N N 40
MMP C28 H281 SING N N 41
MMP C28 H282 SING N N 42
MMP C28 H283 SING N N 43
MMP N3 C31 SING Y N 44
MMP N3 C34 SING Y N 45
MMP N3 HN3 SING N N 46
MMP C31 C32 SING Y N 47
MMP C32 C33 DOUB Y N 48
MMP C32 C36 SING N N 49
MMP C33 C34 SING Y N 50
MMP C33 C37 SING N N 51
MMP C34 C35 DOUB Y Z 52
MMP C35 C41 SING Y N 53
MMP C35 H35 SING N N 54
MMP C36 H361 SING N N 55
MMP C36 H362 SING N N 56
MMP C36 H363 SING N N 57
MMP C37 C38 SING N N 58
MMP C37 H371 SING N N 59
MMP C37 H372 SING N N 60
MMP C38 C39 SING N N 61
MMP C38 H381 SING N N 62
MMP C38 H382 SING N N 63
MMP C39 O31 SING N N 64
MMP C39 O32 DOUB N N 65
MMP O31 HO31 SING N N 66
MMP N4 C41 DOUB Y N 67
MMP N4 C44 SING Y N 68
MMP C41 C42 SING N N 69
MMP C42 C43 DOUB N N 70
MMP C42 C47 SING N N 71
MMP C43 C44 SING N N 72
MMP C43 C46 SING N N 73
MMP C44 C45 DOUB Y Z 74
MMP C45 H45 SING N N 75
MMP C46 H461 SING N N 76
MMP C46 H462 SING N N 77
MMP C46 H463 SING N N 78
MMP C47 C48 SING N N 79
MMP C47 H471 SING N N 80
MMP C47 H472 SING N N 81
MMP C48 C49 SING N N 82
MMP C48 H481 SING N N 83
MMP C48 H482 SING N N 84
MMP C49 O41 SING N N 85
MMP C49 O42 DOUB N N 86
MMP O41 HO41 SING N N 87
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
MMP SMILES ACDLabs 10.04 O=C(O)CCc3c(c4cc1nc(C(=C1CC)C)cc5n(c(cc2nc(C(=C2C)CCC(=O)O)cc3n4)c(c5CC)C)C)C
MMP SMILES_CANONICAL CACTVS 3.341 CCc1c(C)c2cc3n(C)c(cc4nc(cc5[nH]c(cc1n2)c(C)c5CCC(O)=O)c(CCC(O)=O)c4C)c(C)c3CC
MMP SMILES CACTVS 3.341 CCc1c(C)c2cc3n(C)c(cc4nc(cc5[nH]c(cc1n2)c(C)c5CCC(O)=O)c(CCC(O)=O)c4C)c(C)c3CC
MMP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CCc1c(c2cc3nc(\cc/4\c(c(/c(/[nH]4)c/c5n/c(c\c1n2C)/C(=C5CC)C)C)CCC(=O)O)C(=C3C)CCC(=O)O)C
MMP SMILES "OpenEye OEToolkits" 1.5.0 CCc1c(c2cc3nc(cc4c(c(c([nH]4)cc5nc(cc1n2C)C(=C5CC)C)C)CCC(=O)O)C(=C3C)CCC(=O)O)C
MMP InChI InChI 1.03 InChI=1S/C35H40N4O4/c1-8-22-18(3)28-17-33-23(9-2)21(6)32(39(33)7)16-27-20(5)25(11-13-35(42)43)31(38-27)15-30-24(10-12-34(40)41)19(4)26(36-30)14-29(22)37-28/h14-17,36H,8-13H2,1-7H3,(H,40,41)(H,42,43)/b26-14-,27-16-,28-17-,29-14-,30-15-,31-15-,32-16-,33-17-
MMP InChIKey InChI 1.03 YNWHQWMCLCANDI-YIYRCNGCSA-N
#
_pdbx_chem_comp_identifier.comp_id MMP
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program ACDLabs
_pdbx_chem_comp_identifier.program_version 10.04
_pdbx_chem_comp_identifier.identifier "3,3'-(8,13-diethyl-3,7,12,17,22-pentamethylporphyrin-2,18-diyl)dipropanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
MMP 'Create component' 1999-07-08 EBI
MMP 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
MMP C1 C 8.246 0.604 1
MMP N1 N 7.508 2.029 2
MMP C11 C 6.305 2.981 3
MMP C12 C 6.757 4.433 4
MMP C13 C 8.259 4.433 5
MMP C14 C 8.761 3.031 6
MMP C15 C 10.213 2.579 7
MMP C16 C 5.874 5.647 8
MMP C17 C 9.097 5.662 9
MMP C18 C 10.593 5.550 10
MMP N2 N 9.811 -0.025 11
MMP C21 C 10.662 1.178 12
MMP C22 C 12.116 0.776 13
MMP C23 C 12.116 -0.726 14
MMP C24 C 10.712 -1.128 15
MMP C25 C 10.263 -2.579 16
MMP C26 C 13.331 1.659 17
MMP C27 C 13.266 -1.625 18
MMP C28 C 13.057 -3.110 19
MMP N3 N 7.558 -2.079 20
MMP C31 C 8.761 -2.981 21
MMP C32 C 8.309 -4.433 22
MMP C33 C 6.807 -4.433 23
MMP C34 C 6.355 -3.031 24
MMP C35 C 4.904 -2.579 25
MMP C36 C 9.192 -5.648 26
MMP C37 C 5.939 -5.622 27
MMP C38 C 4.448 -5.462 28
MMP C39 C 3.563 -6.673 29
MMP O31 O 2.072 -6.514 30
MMP O32 O 4.171 -8.045 31
MMP N4 N 5.303 -0.025 32
MMP C41 C 4.452 -1.178 33
MMP C42 C 3.000 -0.776 34
MMP C43 C 3.000 0.726 35
MMP C44 C 4.452 1.128 36
MMP C45 C 4.853 2.579 37
MMP C46 C 1.822 1.664 38
MMP C47 C 1.785 -1.659 39
MMP C48 C 0.415 -1.049 40
MMP C49 C -0.799 -1.930 41
MMP O41 O -2.169 -1.320 42
MMP O42 O -0.642 -3.422 43
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
MMP C1 N1 SINGLE NONE 1
MMP N1 C11 SINGLE NONE 2
MMP N1 C14 SINGLE NONE 3
MMP C11 C12 DOUBLE NONE 4
MMP C11 C45 SINGLE ENDUPRIGHT 5
MMP C12 C13 SINGLE NONE 6
MMP C12 C16 SINGLE NONE 7
MMP C13 C14 DOUBLE NONE 8
MMP C13 C17 SINGLE NONE 9
MMP C14 C15 SINGLE ENDUPRIGHT 10
MMP C15 C21 DOUBLE NONE 11
MMP C17 C18 SINGLE NONE 12
MMP N2 C21 SINGLE ENDUPRIGHT 13
MMP N2 C24 DOUBLE NONE 14
MMP C21 C22 SINGLE ENDUPRIGHT 15
MMP C22 C23 DOUBLE NONE 16
MMP C22 C26 SINGLE NONE 17
MMP C23 C24 SINGLE NONE 18
MMP C23 C27 SINGLE NONE 19
MMP C24 C25 SINGLE ENDUPRIGHT 20
MMP C25 C31 DOUBLE NONE 21
MMP C27 C28 SINGLE NONE 22
MMP N3 C31 SINGLE ENDUPRIGHT 23
MMP N3 C34 SINGLE ENDUPRIGHT 24
MMP C31 C32 SINGLE ENDUPRIGHT 25
MMP C32 C33 DOUBLE NONE 26
MMP C32 C36 SINGLE NONE 27
MMP C33 C34 SINGLE ENDDOWNRIGHT 28
MMP C33 C37 SINGLE NONE 29
MMP C34 C35 DOUBLE NONE 30
MMP C35 C41 SINGLE ENDDOWNRIGHT 31
MMP C37 C38 SINGLE NONE 32
MMP C38 C39 SINGLE NONE 33
MMP C39 O31 SINGLE NONE 34
MMP C39 O32 DOUBLE NONE 35
MMP N4 C41 DOUBLE NONE 36
MMP N4 C44 SINGLE ENDUPRIGHT 37
MMP C41 C42 SINGLE NONE 38
MMP C42 C43 DOUBLE NONE 39
MMP C42 C47 SINGLE NONE 40
MMP C43 C44 SINGLE ENDDOWNRIGHT 41
MMP C43 C46 SINGLE NONE 42
MMP C44 C45 DOUBLE NONE 43
MMP C47 C48 SINGLE NONE 44
MMP C48 C49 SINGLE NONE 45
MMP C49 O41 SINGLE NONE 46
MMP C49 O42 DOUBLE NONE 47
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
MMP MurckoScaffold S1 scaffold 'C1=Cc2cc3ccc(cc4nc(cc5ccc(cc1n2)[nH]5)C=C4)[nH]3' InChI=1S/C20H14N4/c1-2-14-10-16-5-6-18(23-16)12-20-8-7-19(24-20)11-17-4-3-15(22-17)9-13(1)21-14/h1-12,21,24H/b13-9-,14-10-,15-9-,16-10-,17-11-,18-12-,19-11-,20-12- RKCAIXNGYQCCAL-CEVVSZFKSA-N
MMP porphin-like F1 fragment C1~C~C2~C~C3~C~C~C(~C~C4~C~C~C(~C~C5~C~C~C(~C~C~1~N~2)~N~5)~N~4)~N~3 ? ?
MMP pyrrole F2 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
MMP N1 S1 1
MMP C11 S1 1
MMP C12 S1 1
MMP C13 S1 1
MMP C14 S1 1
MMP C15 S1 1
MMP N2 S1 1
MMP C21 S1 1
MMP C22 S1 1
MMP C23 S1 1
MMP C24 S1 1
MMP C25 S1 1
MMP N3 S1 1
MMP C31 S1 1
MMP C32 S1 1
MMP C33 S1 1
MMP C34 S1 1
MMP C35 S1 1
MMP N4 S1 1
MMP C41 S1 1
MMP C42 S1 1
MMP C43 S1 1
MMP C44 S1 1
MMP C45 S1 1
MMP C12 F1 1
MMP C13 F1 1
MMP C14 F1 1
MMP C15 F1 1
MMP C21 F1 1
MMP N2 F1 1
MMP C24 F1 1
MMP C23 F1 1
MMP C22 F1 1
MMP C25 F1 1
MMP C31 F1 1
MMP N3 F1 1
MMP C34 F1 1
MMP C35 F1 1
MMP C41 F1 1
MMP N4 F1 1
MMP C44 F1 1
MMP C45 F1 1
MMP C11 F1 1
MMP N1 F1 1
MMP C43 F1 1
MMP C42 F1 1
MMP C33 F1 1
MMP C32 F1 1
MMP C11 F2 1
MMP C12 F2 1
MMP C13 F2 1
MMP C14 F2 1
MMP N1 F2 1
MMP C31 F2 2
MMP C32 F2 2
MMP C33 F2 2
MMP C34 F2 2
MMP N3 F2 2
#
_pdbe_chem_comp_rdkit_properties.comp_id MMP
_pdbe_chem_comp_rdkit_properties.exactmw 580.305
_pdbe_chem_comp_rdkit_properties.amw 580.729
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 15
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 43
_pdbe_chem_comp_rdkit_properties.NumAtoms 83
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.371
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 5
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 8
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 307.831
_pdbe_chem_comp_rdkit_properties.tpsa 121.100
_pdbe_chem_comp_rdkit_properties.CrippenClogP 6.363
_pdbe_chem_comp_rdkit_properties.CrippenMR 166.027
_pdbe_chem_comp_rdkit_properties.chi0v 20.922
_pdbe_chem_comp_rdkit_properties.chi1v 11.329
_pdbe_chem_comp_rdkit_properties.chi2v 5.789
_pdbe_chem_comp_rdkit_properties.chi3v 5.789
_pdbe_chem_comp_rdkit_properties.chi4v 3.895
_pdbe_chem_comp_rdkit_properties.chi0n 60.922
_pdbe_chem_comp_rdkit_properties.chi1n 31.093
_pdbe_chem_comp_rdkit_properties.chi2n 5.789
_pdbe_chem_comp_rdkit_properties.chi3n 5.789
_pdbe_chem_comp_rdkit_properties.chi4n 3.895
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.460
_pdbe_chem_comp_rdkit_properties.kappa1 7.972
_pdbe_chem_comp_rdkit_properties.kappa2 11.669
_pdbe_chem_comp_rdkit_properties.kappa3 5.419
_pdbe_chem_comp_rdkit_properties.Phi 2.163
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
MMP UniChem ChEBI 44085
MMP UniChem SureChEMBL SCHEMBL505199
MMP UniChem Nikkaji J2.132.966E
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
MMP C1 1.733 -1.588 -1.599 ETKDGv3 1
MMP N1 2.257 -1.370 -0.250 ETKDGv3 2
MMP C11 2.252 -2.394 0.753 ETKDGv3 3
MMP C12 3.373 -2.362 1.473 ETKDGv3 4
MMP C13 4.159 -1.222 1.000 ETKDGv3 5
MMP C14 3.483 -0.667 -0.005 ETKDGv3 6
MMP C15 3.951 0.500 -0.783 ETKDGv3 7
MMP C16 3.694 -3.233 2.653 ETKDGv3 8
MMP C17 5.503 -0.788 1.523 ETKDGv3 9
MMP C18 6.623 -1.557 0.832 ETKDGv3 10
MMP N2 1.769 1.589 -0.740 ETKDGv3 11
MMP C21 3.141 1.515 -1.106 ETKDGv3 12
MMP C22 3.505 2.731 -1.829 ETKDGv3 13
MMP C23 2.382 3.443 -1.930 ETKDGv3 14
MMP C24 1.324 2.706 -1.215 ETKDGv3 15
MMP C25 -0.072 3.177 -1.055 ETKDGv3 16
MMP C26 4.838 3.064 -2.435 ETKDGv3 17
MMP C27 2.231 4.777 -2.612 ETKDGv3 18
MMP C28 2.424 5.915 -1.617 ETKDGv3 19
MMP N3 -1.005 1.105 -0.092 ETKDGv3 20
MMP C31 -1.092 2.451 -0.557 ETKDGv3 21
MMP C32 -2.497 2.888 -0.510 ETKDGv3 22
MMP C33 -3.248 1.847 -0.128 ETKDGv3 23
MMP C34 -2.352 0.716 0.167 ETKDGv3 24
MMP C35 -2.751 -0.495 0.601 ETKDGv3 25
MMP C36 -3.012 4.244 -0.908 ETKDGv3 26
MMP C37 -4.750 1.847 0.018 ETKDGv3 27
MMP C38 -5.149 2.163 1.461 ETKDGv3 28
MMP C39 -6.637 2.152 1.606 ETKDGv3 29
MMP O31 -7.365 3.313 1.366 ETKDGv3 30
MMP O32 -7.235 1.083 1.904 ETKDGv3 31
MMP N4 -0.591 -1.656 0.679 ETKDGv3 32
MMP C41 -1.878 -1.675 0.804 ETKDGv3 33
MMP C42 -2.362 -3.024 1.151 ETKDGv3 34
MMP C43 -1.302 -3.831 1.194 ETKDGv3 35
MMP C44 -0.143 -2.983 0.924 ETKDGv3 36
MMP C45 1.143 -3.347 0.978 ETKDGv3 37
MMP C46 -1.287 -5.287 1.565 ETKDGv3 38
MMP C47 -3.802 -3.418 1.372 ETKDGv3 39
MMP C48 -4.561 -3.573 0.048 ETKDGv3 40
MMP C49 -4.053 -4.735 -0.749 ETKDGv3 41
MMP O41 -3.028 -4.548 -1.671 ETKDGv3 42
MMP O42 -4.526 -5.887 -0.557 ETKDGv3 43
MMP H11 1.647 -0.628 -2.146 ETKDGv3 44
MMP H12 2.416 -2.260 -2.159 ETKDGv3 45
MMP H13 0.728 -2.052 -1.562 ETKDGv3 46
MMP H15 5.002 0.558 -1.029 ETKDGv3 47
MMP H161 3.097 -2.905 3.529 ETKDGv3 48
MMP H162 3.462 -4.294 2.425 ETKDGv3 49
MMP H163 4.771 -3.173 2.905 ETKDGv3 50
MMP H171 5.553 -0.964 2.618 ETKDGv3 51
MMP H172 5.649 0.301 1.363 ETKDGv3 52
MMP H181 6.513 -2.648 1.014 ETKDGv3 53
MMP H182 7.604 -1.227 1.234 ETKDGv3 54
MMP H183 6.605 -1.366 -0.262 ETKDGv3 55
MMP H25 -0.286 4.171 -1.418 ETKDGv3 56
MMP H261 5.659 2.607 -1.846 ETKDGv3 57
MMP H262 5.004 4.161 -2.439 ETKDGv3 58
MMP H263 4.877 2.681 -3.475 ETKDGv3 59
MMP H271 1.222 4.852 -3.070 ETKDGv3 60
MMP H272 2.965 4.878 -3.439 ETKDGv3 61
MMP H281 1.668 5.852 -0.806 ETKDGv3 62
MMP H282 3.441 5.871 -1.173 ETKDGv3 63
MMP H283 2.305 6.888 -2.138 ETKDGv3 64
MMP HN3 -0.156 0.654 0.301 ETKDGv3 65
MMP H35 -3.805 -0.646 0.779 ETKDGv3 66
MMP H361 -3.227 4.255 -1.997 ETKDGv3 67
MMP H362 -3.934 4.501 -0.347 ETKDGv3 68
MMP H363 -2.265 5.028 -0.672 ETKDGv3 69
MMP H371 -5.153 0.856 -0.279 ETKDGv3 70
MMP H372 -5.207 2.587 -0.674 ETKDGv3 71
MMP H381 -4.764 3.165 1.748 ETKDGv3 72
MMP H382 -4.705 1.412 2.151 ETKDGv3 73
MMP HO31 -8.375 3.318 1.444 ETKDGv3 74
MMP H45 1.392 -4.355 1.280 ETKDGv3 75
MMP H461 -1.219 -5.387 2.668 ETKDGv3 76
MMP H462 -0.421 -5.796 1.096 ETKDGv3 77
MMP H463 -2.203 -5.797 1.205 ETKDGv3 78
MMP H471 -3.875 -4.356 1.963 ETKDGv3 79
MMP H472 -4.297 -2.632 1.979 ETKDGv3 80
MMP H481 -4.473 -2.645 -0.557 ETKDGv3 81
MMP H482 -5.640 -3.726 0.266 ETKDGv3 82
MMP HO41 -2.657 -5.328 -2.201 ETKDGv3 83
#