Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : LVX

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 69


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 F01 F F1 N N N 0 6.872 0.432 1.192
2 C02 C C1 N N N 0 6.72 1.286 0.095
3 F03 F F2 N N N 0 7.919 1.339 -0.624
4 C04 C C2 N N N 0 5.606 0.76 -0.811
5 C05 C C3 R N N 0 4.294 0.702 -0.025
6 C06 C C4 N N N 0 3.196 0.184 -0.918
7 O34 O O1 N N N 0 3.438 -0.11 -2.069
8 C35 C C5 N N N 0 3.932 2.105 0.467
9 C36 C C6 N N N 0 5.047 2.631 1.373
10 C37 C C7 N N N 0 6.358 2.689 0.587
11 O10 O O2 N N N 0 -0.354 1.621 -1.219
12 N07 N N1 N N N 0 1.945 0.047 -0.436
13 C08 C C8 R N N 0 0.877 -0.457 -1.304
14 C12 C C9 N N N 0 -0.201 -1.087 -0.46
15 O33 O O3 N N N 0 -0.089 -1.112 0.748
16 C09 C C10 N N N 0 0.284 0.702 -2.108
17 C11 C C11 N N N 0 -0.944 2.747 -1.872
18 C14 C C13 R N N 0 -2.338 -2.234 -0.226
19 C15 C C20 S N N 0 -3.667 -2.193 -0.983
20 N13 N N2 N N N 0 -1.29 -1.622 -1.047
21 O25 O O4 N N N 0 -3.576 -3.011 -2.151
22 C16 C C21 N N N 0 -3.972 -0.773 -1.386
23 C26 C C14 N N N 0 -1.967 -3.687 0.074
24 C27 C C15 N Y N 0 -0.723 -3.723 0.924
25 C32 C C19 N Y N 0 0.522 -3.765 0.326
26 C31 C C12 N Y N 0 1.663 -3.798 1.106
27 C30 C C18 N Y N 0 1.559 -3.788 2.484
28 C29 C C17 N Y N 0 0.313 -3.745 3.083
29 C28 C C16 N Y N 0 -0.827 -3.707 2.303
30 O24 O O5 N N N 0 -4.009 -0.471 -2.56
31 C19 C C22 N Y N 0 -4.718 2.377 0.4
32 C22 C C23 N Y N 0 -5.462 3.647 2.373
33 C18 C C24 N N N 0 -4.5 1.541 -0.834
34 C21 C C25 N Y N 0 -4.156 3.704 2.096
35 N17 N N3 N N N 0 -4.204 0.16 -0.442
36 N20 N N4 N Y N 0 -3.793 3.017 1.032
37 S23 S S1 N Y N 0 -6.229 2.623 1.162
38 H1 H H1 N N N 0 5.487 1.426 -1.666
39 H2 H H2 N N N 0 5.864 -0.239 -1.162
40 H3 H H3 N N N 0 4.412 0.036 0.83
41 H4 H H4 N N N 0 3.814 2.77 -0.388
42 H5 H H5 N N N 0 2.998 2.063 1.027
43 H6 H H6 N N N 0 4.789 3.63 1.724
44 H7 H H7 N N N 0 5.165 1.965 2.228
45 H8 H H8 N N N 0 7.153 3.064 1.233
46 H9 H H9 N N N 0 6.24 3.355 -0.268
47 H10 H H10 N N N 0 1.751 0.282 0.485
48 H11 H H11 N N N 0 1.285 -1.202 -1.987
49 H12 H H12 N N N 0 -0.448 0.315 -2.817
50 H13 H H13 N N N 0 1.079 1.213 -2.65
51 H14 H H14 N N N 0 -1.407 3.396 -1.129
52 H15 H H15 N N N 0 -0.174 3.3 -2.409
53 H16 H H16 N N N 0 -1.702 2.402 -2.576
54 H18 H H18 N N N 0 -2.435 -1.683 0.709
55 H25 H H25 N N N 0 -4.463 -2.567 -0.339
56 H26 H H26 N N N 0 -1.38 -1.601 -2.012
57 H27 H H27 N N N 0 -2.886 -2.736 -2.771
58 H19 H H19 N N N 0 -2.786 -4.169 0.608
59 H20 H H20 N N N 0 -1.783 -4.216 -0.861
60 H24 H H24 N N N 0 0.604 -3.773 -0.751
61 H17 H H17 N N N 0 2.636 -3.832 0.638
62 H23 H H23 N N N 0 2.45 -3.815 3.094
63 H22 H H22 N N N 0 0.231 -3.738 4.16
64 H21 H H21 N N N 0 -1.8 -3.67 2.77
65 H28 H H28 N N N 0 -5.958 4.137 3.197
66 H29 H H29 N N N 0 -5.4 1.558 -1.449
67 H30 H H30 N N N 0 -3.663 1.944 -1.404
68 H31 H H31 N N N 0 -3.455 4.266 2.696
69 H32 H H32 N N N 0 -4.174 -0.082 0.497