data_LVX
#
_chem_comp.id LVX
_chem_comp.name
'(1~{R})-3,3-bis(fluoranyl)-~{N}-[(2~{R})-3-methoxy-1-oxidanylidene-1-[[(2~{R},3~{S})-3-oxidanyl-4-oxidanylidene-1-phenyl-4-(1,3-thiazol-2-ylmethylamino)butan-2-yl]amino]propan-2-yl]cyclohexane-1-carboxamide'
_chem_comp.type peptide-like
_chem_comp.pdbx_type HETAIN
_chem_comp.formula 'C25 H32 F2 N4 O5 S'
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-12-08
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 538.607
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code LVX
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8HHU
_chem_comp.pdbx_subcomponent_list 'LWF 7C9 01B LU3'
_chem_comp.pdbx_processing_site PDBJ
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LVX F01 F1 F 0 1 N N N N N N -18.867 -39.394 -2.648 6.872 0.432 1.192 F01 LWF 1
LVX C02 C1 C 0 1 N N N N N N -18.621 -40.178 -1.563 6.720 1.286 0.095 C02 LWF 2
LVX F03 F2 F 0 1 N N N N N N -17.346 -39.903 -1.159 7.919 1.339 -0.624 F03 LWF 3
LVX C04 C2 C 0 1 N N N N N N -19.594 -39.818 -0.415 5.606 0.760 -0.811 C04 LWF 4
LVX C05 C3 C 0 1 N N R N N N -21.010 -40.407 -0.527 4.294 0.702 -0.025 C05 LWF 5
LVX C06 C4 C 0 1 N N N N N N -21.715 -40.404 0.840 3.196 0.184 -0.918 C06 LWF 6
LVX O34 O1 O 0 1 N N N N N N -21.082 -40.525 1.842 3.438 -0.110 -2.069 O34 LWF 7
LVX C35 C5 C 0 1 N N N N N N -21.032 -41.844 -1.066 3.932 2.105 0.467 C35 LWF 8
LVX C36 C6 C 0 1 N N N N N N -20.136 -42.063 -2.295 5.047 2.631 1.373 C36 LWF 9
LVX C37 C7 C 0 1 N N N N N N -18.690 -41.634 -2.036 6.358 2.689 0.587 C37 LWF 10
LVX O10 O2 O 0 1 N N N N N N -26.106 -39.277 2.273 -0.354 1.621 -1.219 O20 7C9 11
LVX N07 N1 N 0 1 N N N N N N -23.166 -40.239 0.911 1.945 0.047 -0.436 N03 7C9 12
LVX C08 C8 C 0 1 N N R N N N -23.895 -40.250 2.179 0.877 -0.457 -1.304 C04 7C9 13
LVX C12 C9 C 0 1 N N N N N N -23.579 -39.041 3.072 -0.201 -1.087 -0.460 C05 7C9 14
LVX O33 O3 O 0 1 N N N N N N -24.003 -38.977 4.178 -0.089 -1.112 0.748 O18 7C9 15
LVX C09 C10 C 0 1 N N N N N N -25.395 -40.431 1.916 0.284 0.702 -2.108 C19 7C9 16
LVX C11 C11 C 0 1 N N N N N N -26.916 -38.776 1.248 -0.944 2.747 -1.872 C21 7C9 17
LVX C14 C13 C 0 1 N N R N N N -22.405 -36.835 3.440 -2.338 -2.234 -0.226 C1 01B 18
LVX C15 C20 C 0 1 N N S N N N -20.907 -36.937 3.763 -3.667 -2.193 -0.983 C2 01B 19
LVX N13 N2 N 0 1 N N N N N N -22.753 -37.957 2.585 -1.290 -1.622 -1.047 N2 01B 20
LVX O25 O4 O 0 1 N N N N N N -20.152 -37.097 2.593 -3.576 -3.011 -2.151 O2 01B 21
LVX C16 C21 C 0 1 N N N N N N -20.549 -38.029 4.769 -3.972 -0.773 -1.386 C3 01B 22
LVX C26 C14 C 0 1 N N N N N N -22.627 -35.512 2.701 -1.967 -3.687 0.074 C6 01B 23
LVX C27 C15 C 0 1 Y N N N N N -24.098 -35.186 2.467 -0.723 -3.723 0.924 C7 01B 24
LVX C32 C19 C 0 1 Y N N N N N -24.704 -35.538 1.271 0.522 -3.765 0.326 C8 01B 25
LVX C31 C12 C 0 1 Y N N N N N -26.036 -35.228 1.054 1.663 -3.798 1.106 C9 01B 26
LVX C30 C18 C 0 1 Y N N N N N -26.758 -34.572 2.040 1.559 -3.788 2.484 C10 01B 27
LVX C29 C17 C 0 1 Y N N N N N -26.149 -34.215 3.236 0.313 -3.745 3.083 C11 01B 28
LVX C28 C16 C 0 1 Y N N N N N -24.815 -34.522 3.450 -0.827 -3.707 2.303 C12 01B 29
LVX O24 O5 O 0 1 N N N N N N -20.997 -37.988 5.856 -4.009 -0.471 -2.560 O3 01B 30
LVX C19 C22 C 0 1 Y N N N N N -19.989 -41.124 5.988 -4.718 2.377 0.400 C17 LU3 31
LVX C22 C23 C 0 1 Y N N N N N -21.834 -42.565 6.726 -5.462 3.647 2.373 C20 LU3 32
LVX C18 C24 C 0 1 N N N N N N -19.092 -40.107 5.294 -4.500 1.541 -0.834 C16 LU3 33
LVX C21 C25 C 0 1 Y N N N N N -20.645 -42.862 7.446 -4.156 3.704 2.096 C19 LU3 34
LVX N17 N3 N 0 1 N N N N N N -19.627 -39.089 4.403 -4.204 0.160 -0.442 N15 LU3 35
LVX N20 N4 N 0 1 Y N N N N N -19.553 -41.989 6.990 -3.793 3.017 1.032 N18 LU3 36
LVX S23 S1 S 0 1 Y N N N N N -21.545 -41.393 5.660 -6.229 2.623 1.162 S21 LU3 37
LVX H1 H1 H 0 1 N N N N N N -19.153 -40.177 0.526 5.487 1.426 -1.666 H7 LWF 38
LVX H2 H2 H 0 1 N N N N N N -19.686 -38.722 -0.382 5.864 -0.239 -1.162 H8 LWF 39
LVX H3 H3 H 0 1 N N N N N N -21.591 -39.774 -1.214 4.412 0.036 0.830 H9 LWF 40
LVX H4 H4 H 0 1 N N N N N N -22.067 -42.094 -1.343 3.814 2.770 -0.388 H27 LWF 41
LVX H5 H5 H 0 1 N N N N N N -20.693 -42.519 -0.266 2.998 2.063 1.027 H28 LWF 42
LVX H6 H6 H 0 1 N N N N N N -20.536 -41.475 -3.135 4.789 3.630 1.724 H29 LWF 43
LVX H7 H7 H 0 1 N N N N N N -20.148 -43.131 -2.557 5.165 1.965 2.228 H30 LWF 44
LVX H8 H8 H 0 1 N N N N N N -18.256 -42.284 -1.262 7.153 3.064 1.233 H31 LWF 45
LVX H9 H9 H 0 1 N N N N N N -18.113 -41.737 -2.967 6.240 3.355 -0.268 H32 LWF 46
LVX H10 H10 H 0 1 N N N N N N -23.679 -40.114 0.062 1.751 0.282 0.485 H5 7C9 47
LVX H11 H11 H 0 1 N N N N N N -23.567 -41.141 2.735 1.285 -1.202 -1.987 H6 7C9 48
LVX H12 H12 H 0 1 N N N N N N -25.552 -40.635 0.846 -0.448 0.315 -2.817 H13 7C9 49
LVX H13 H13 H 0 1 N N N N N N -25.765 -41.280 2.509 1.079 1.213 -2.650 H14 7C9 50
LVX H14 H14 H 0 1 N N N N N N -27.440 -37.875 1.601 -1.407 3.396 -1.129 H15 7C9 51
LVX H15 H15 H 0 1 N N N N N N -26.292 -38.520 0.379 -0.174 3.300 -2.409 H16 7C9 52
LVX H16 H16 H 0 1 N N N N N N -27.654 -39.539 0.958 -1.702 2.402 -2.576 H17 7C9 53
LVX H18 H18 H 0 1 N N N N N N -22.991 -36.849 4.371 -2.435 -1.683 0.709 H1 01B 54
LVX H25 H25 H 0 1 N N N N N N -20.622 -35.980 4.225 -4.463 -2.567 -0.339 H2 01B 55
LVX H26 H26 H 0 1 N N N N N N -22.416 -37.981 1.644 -1.380 -1.601 -2.012 HN2A 01B 56
LVX H27 H27 H 0 1 N N N N N N -19.231 -37.158 2.816 -2.886 -2.736 -2.771 HO2 01B 57
LVX H19 H19 H 0 1 N N N N N N -22.123 -35.570 1.725 -2.786 -4.169 0.608 H6 01B 58
LVX H20 H20 H 0 1 N N N N N N -22.181 -34.702 3.296 -1.783 -4.216 -0.861 H6A 01B 59
LVX H24 H24 H 0 1 N N N N N N -24.138 -36.053 0.509 0.604 -3.773 -0.751 H8 01B 60
LVX H17 H17 H 0 1 N N N N N N -26.510 -35.496 0.121 2.636 -3.832 0.638 H9 01B 61
LVX H23 H23 H 0 1 N N N N N N -27.800 -34.338 1.877 2.450 -3.815 3.094 H10 01B 62
LVX H22 H22 H 0 1 N N N N N N -26.714 -33.699 3.998 0.231 -3.738 4.160 H11 01B 63
LVX H21 H21 H 0 1 N N N N N N -24.336 -34.245 4.378 -1.800 -3.670 2.770 H12 01B 64
LVX H28 H28 H 0 1 N N N N N N -22.787 -43.052 6.872 -5.958 4.137 3.197 H2 LU3 65
LVX H29 H29 H 0 1 N N N N N N -18.370 -40.687 4.700 -5.400 1.558 -1.449 H14 LU3 66
LVX H30 H30 H 0 1 N N N N N N -18.561 -39.569 6.093 -3.663 1.944 -1.404 H15 LU3 67
LVX H31 H31 H 0 1 N N N N N N -20.557 -43.616 8.214 -3.455 4.266 2.696 H16 LU3 68
LVX H32 H32 H 0 1 N N N N N N -19.332 -39.123 3.448 -4.174 -0.082 0.497 H20 LU3 69
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LVX F01 C02 SING N N 1
LVX C36 C37 SING N N 2
LVX C36 C35 SING N N 3
LVX C37 C02 SING N N 4
LVX C02 F03 SING N N 5
LVX C02 C04 SING N N 6
LVX C35 C05 SING N N 7
LVX C05 C04 SING N N 8
LVX C05 C06 SING N N 9
LVX C06 N07 SING N N 10
LVX C06 O34 DOUB N N 11
LVX N07 C08 SING N N 12
LVX C31 C32 DOUB Y N 13
LVX C31 C30 SING Y N 14
LVX C11 O10 SING N N 15
LVX C32 C27 SING Y N 16
LVX C09 C08 SING N N 17
LVX C09 O10 SING N N 18
LVX C30 C29 DOUB Y N 19
LVX C08 C12 SING N N 20
LVX C27 C26 SING N N 21
LVX C27 C28 DOUB Y N 22
LVX N13 C12 SING N N 23
LVX N13 C14 SING N N 24
LVX O25 C15 SING N N 25
LVX C26 C14 SING N N 26
LVX C12 O33 DOUB N N 27
LVX C29 C28 SING Y N 28
LVX C14 C15 SING N N 29
LVX C15 C16 SING N N 30
LVX N17 C16 SING N N 31
LVX N17 C18 SING N N 32
LVX C16 O24 DOUB N N 33
LVX C18 C19 SING N N 34
LVX S23 C19 SING Y N 35
LVX S23 C22 SING Y N 36
LVX C19 N20 DOUB Y N 37
LVX C22 C21 DOUB Y N 38
LVX N20 C21 SING Y N 39
LVX C04 H1 SING N N 40
LVX C04 H2 SING N N 41
LVX C05 H3 SING N N 42
LVX C35 H4 SING N N 43
LVX C35 H5 SING N N 44
LVX C36 H6 SING N N 45
LVX C36 H7 SING N N 46
LVX C37 H8 SING N N 47
LVX C37 H9 SING N N 48
LVX N07 H10 SING N N 49
LVX C08 H11 SING N N 50
LVX C09 H12 SING N N 51
LVX C09 H13 SING N N 52
LVX C11 H14 SING N N 53
LVX C11 H15 SING N N 54
LVX C11 H16 SING N N 55
LVX C31 H17 SING N N 56
LVX C14 H18 SING N N 57
LVX C26 H19 SING N N 58
LVX C26 H20 SING N N 59
LVX C28 H21 SING N N 60
LVX C29 H22 SING N N 61
LVX C30 H23 SING N N 62
LVX C32 H24 SING N N 63
LVX C15 H25 SING N N 64
LVX N13 H26 SING N N 65
LVX O25 H27 SING N N 66
LVX C22 H28 SING N N 67
LVX C18 H29 SING N N 68
LVX C18 H30 SING N N 69
LVX C21 H31 SING N N 70
LVX N17 H32 SING N N 71
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LVX InChI InChI 1.06 'InChI=1S/C25H32F2N4O5S/c1-36-15-19(31-22(33)17-8-5-9-25(26,27)13-17)23(34)30-18(12-16-6-3-2-4-7-16)21(32)24(35)29-14-20-28-10-11-37-20/h2-4,6-7,10-11,17-19,21,32H,5,8-9,12-15H2,1H3,(H,29,35)(H,30,34)(H,31,33)/t17-,18-,19-,21+/m1/s1'
LVX InChIKey InChI 1.06 PYEYIJGOSSTTFY-XCJLJZCSSA-N
LVX SMILES_CANONICAL CACTVS 3.385 'COC[C@@H](NC(=O)[C@@H]1CCCC(F)(F)C1)C(=O)N[C@H](Cc2ccccc2)[C@H](O)C(=O)NCc3sccn3'
LVX SMILES CACTVS 3.385 'COC[CH](NC(=O)[CH]1CCCC(F)(F)C1)C(=O)N[CH](Cc2ccccc2)[CH](O)C(=O)NCc3sccn3'
LVX SMILES_CANONICAL 'OpenEye OEToolkits' 2.0.7 'COC[C@H](C(=O)N[C@H](Cc1ccccc1)[C@@H](C(=O)NCc2nccs2)O)NC(=O)[C@@H]3CCCC(C3)(F)F'
LVX SMILES 'OpenEye OEToolkits' 2.0.7 'COCC(C(=O)NC(Cc1ccccc1)C(C(=O)NCc2nccs2)O)NC(=O)C3CCCC(C3)(F)F'
#
_pdbx_chem_comp_identifier.comp_id LVX
_pdbx_chem_comp_identifier.type 'SYSTEMATIC NAME'
_pdbx_chem_comp_identifier.program 'OpenEye OEToolkits'
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
'(1~{R})-3,3-bis(fluoranyl)-~{N}-[(2~{R})-3-methoxy-1-oxidanylidene-1-[[(2~{R},3~{S})-3-oxidanyl-4-oxidanylidene-1-phenyl-4-(1,3-thiazol-2-ylmethylamino)butan-2-yl]amino]propan-2-yl]cyclohexane-1-carboxamide'
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LVX 'Create component' 2022-12-08 PDBJ
LVX 'Modify linking type' 2023-01-26 PDBJ
LVX 'Modify subcomponent list' 2023-01-26 PDBJ
LVX 'Modify formula' 2023-01-26 PDBJ
LVX 'Initial release' 2023-03-29 RCSB
LVX 'Modify PCM' 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id LVX
_pdbx_chem_comp_pcm.modified_residue_id CYS
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category 'Covalent chemical modification'
_pdbx_chem_comp_pcm.position 'Amino-acid side chain'
_pdbx_chem_comp_pcm.polypeptide_position 'Any position'
_pdbx_chem_comp_pcm.comp_id_linking_atom C15
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
LVX F01 F 3.750 -9.304 1
LVX C02 C 4.500 -8.005 2
LVX F03 F 3.000 -8.005 3
LVX C04 C 4.500 -6.505 4
LVX C05 C 5.799 -5.755 5
LVX C06 C 5.799 -4.255 6
LVX O34 O 4.500 -3.505 7
LVX C35 C 7.098 -6.505 8
LVX C36 C 7.098 -8.005 9
LVX C37 C 5.799 -8.755 10
LVX O10 O 5.799 0.245 11
LVX N07 N 7.098 -3.505 12
LVX C08 C 7.098 -2.005 13
LVX C12 C 8.397 -1.255 14
LVX O33 O 9.696 -2.005 15
LVX C09 C 5.799 -1.255 16
LVX C11 C 4.500 0.995 17
LVX C14 C 9.696 0.995 18
LVX C15 C 9.696 2.495 19
LVX N13 N 8.397 0.245 20
LVX O25 O 10.995 3.245 21
LVX C16 C 8.397 3.245 22
LVX C26 C 10.995 0.245 23
LVX C27 C 12.294 0.995 24
LVX C32 C 12.294 2.495 25
LVX C31 C 13.593 3.245 26
LVX C30 C 14.892 2.495 27
LVX C29 C 14.892 0.995 28
LVX C28 C 13.593 0.245 29
LVX O24 O 7.098 2.495 30
LVX C19 C 7.098 6.995 31
LVX C22 C 7.848 9.304 32
LVX C18 C 7.098 5.495 33
LVX C21 C 6.348 9.304 34
LVX N17 N 8.397 4.745 35
LVX N20 N 5.885 7.877 36
LVX S23 S 8.312 7.877 37
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
LVX F01 C02 SINGLE NONE 1
LVX C36 C37 SINGLE NONE 2
LVX C36 C35 SINGLE NONE 3
LVX C37 C02 SINGLE NONE 4
LVX C02 F03 SINGLE NONE 5
LVX C02 C04 SINGLE NONE 6
LVX C35 C05 SINGLE NONE 7
LVX C05 C04 SINGLE NONE 8
LVX C05 C06 SINGLE BEGINDASH 9
LVX C06 N07 SINGLE NONE 10
LVX C06 O34 DOUBLE NONE 11
LVX N07 C08 SINGLE NONE 12
LVX C31 C32 DOUBLE NONE 13
LVX C31 C30 SINGLE NONE 14
LVX C11 O10 SINGLE NONE 15
LVX C32 C27 SINGLE NONE 16
LVX C08 C09 SINGLE BEGINDASH 17
LVX C09 O10 SINGLE NONE 18
LVX C30 C29 DOUBLE NONE 19
LVX C08 C12 SINGLE NONE 20
LVX C27 C26 SINGLE NONE 21
LVX C27 C28 DOUBLE NONE 22
LVX N13 C12 SINGLE NONE 23
LVX N13 C14 SINGLE NONE 24
LVX C15 O25 SINGLE BEGINWEDGE 25
LVX C14 C26 SINGLE BEGINWEDGE 26
LVX C12 O33 DOUBLE NONE 27
LVX C29 C28 SINGLE NONE 28
LVX C14 C15 SINGLE NONE 29
LVX C15 C16 SINGLE NONE 30
LVX N17 C16 SINGLE NONE 31
LVX N17 C18 SINGLE NONE 32
LVX C16 O24 DOUBLE NONE 33
LVX C18 C19 SINGLE NONE 34
LVX S23 C19 SINGLE NONE 35
LVX S23 C22 SINGLE NONE 36
LVX C19 N20 DOUBLE NONE 37
LVX C22 C21 DOUBLE NONE 38
LVX N20 C21 SINGLE NONE 39
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
LVX MurckoScaffold S1 scaffold 'O=C(C[C@@H](Cc1ccccc1)NC(=O)CNC(=O)C1CCCCC1)NCc1nccs1' InChI=1S/C23H30N4O3S/c28-20(25-16-22-24-11-12-31-22)14-19(13-17-7-3-1-4-8-17)27-21(29)15-26-23(30)18-9-5-2-6-10-18/h1,3-4,7-8,11-12,18-19H,2,5-6,9-10,13-16H2,(H,25,28)(H,26,30)(H,27,29)/t19-/m1/s1 DPAYXAULDFJKQO-LJQANCHMSA-N
LVX amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
LVX cyclohexane F2 fragment C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
LVX peptide F3 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
LVX phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
LVX thiazole F5 fragment c1cscn1 InChI=1S/C3H3NS/c1-2-5-3-4-1/h1-3H FZWLAAWBMGSTSO-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
LVX C02 S1 1
LVX C04 S1 1
LVX C05 S1 1
LVX C06 S1 1
LVX O34 S1 1
LVX C35 S1 1
LVX C36 S1 1
LVX C37 S1 1
LVX N07 S1 1
LVX C08 S1 1
LVX C12 S1 1
LVX O33 S1 1
LVX C14 S1 1
LVX C15 S1 1
LVX N13 S1 1
LVX C16 S1 1
LVX C26 S1 1
LVX C27 S1 1
LVX C32 S1 1
LVX C31 S1 1
LVX C30 S1 1
LVX C29 S1 1
LVX C28 S1 1
LVX O24 S1 1
LVX C19 S1 1
LVX C22 S1 1
LVX C18 S1 1
LVX C21 S1 1
LVX N17 S1 1
LVX N20 S1 1
LVX S23 S1 1
LVX N07 F1 1
LVX C06 F1 1
LVX O34 F1 1
LVX C05 F1 1
LVX N13 F1 2
LVX C12 F1 2
LVX O33 F1 2
LVX C08 F1 2
LVX N17 F1 3
LVX C16 F1 3
LVX O24 F1 3
LVX C15 F1 3
LVX C02 F2 1
LVX C37 F2 1
LVX C36 F2 1
LVX C35 F2 1
LVX C05 F2 1
LVX C04 F2 1
LVX O33 F3 1
LVX C12 F3 1
LVX C08 F3 1
LVX N07 F3 1
LVX C27 F4 1
LVX C32 F4 1
LVX C31 F4 1
LVX C30 F4 1
LVX C29 F4 1
LVX C28 F4 1
LVX C22 F5 1
LVX C21 F5 1
LVX N20 F5 1
LVX C19 F5 1
LVX S23 F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id LVX
_pdbe_chem_comp_rdkit_properties.exactmw 538.206
_pdbe_chem_comp_rdkit_properties.amw 538.617
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 14
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 37
_pdbe_chem_comp_rdkit_properties.NumAtoms 69
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 12
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 3
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.520
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 262.775
_pdbe_chem_comp_rdkit_properties.tpsa 129.650
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.695
_pdbe_chem_comp_rdkit_properties.CrippenMR 132.224
_pdbe_chem_comp_rdkit_properties.chi0v 18.311
_pdbe_chem_comp_rdkit_properties.chi1v 9.866
_pdbe_chem_comp_rdkit_properties.chi2v 4.006
_pdbe_chem_comp_rdkit_properties.chi3v 4.006
_pdbe_chem_comp_rdkit_properties.chi4v 2.376
_pdbe_chem_comp_rdkit_properties.chi0n 49.494
_pdbe_chem_comp_rdkit_properties.chi1n 24.800
_pdbe_chem_comp_rdkit_properties.chi2n 3.436
_pdbe_chem_comp_rdkit_properties.chi3n 3.436
_pdbe_chem_comp_rdkit_properties.chi4n 2.006
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.960
_pdbe_chem_comp_rdkit_properties.kappa1 8.027
_pdbe_chem_comp_rdkit_properties.kappa2 13.545
_pdbe_chem_comp_rdkit_properties.kappa3 8.831
_pdbe_chem_comp_rdkit_properties.Phi 2.939
#
_pdbe_chem_comp_external_mappings.comp_id LVX
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 167530388
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
LVX F01 9.256 0.591 -0.022 ETKDGv3 1
LVX C02 7.946 0.181 -0.195 ETKDGv3 2
LVX F03 7.374 0.044 1.057 ETKDGv3 3
LVX C04 7.197 1.251 -1.019 ETKDGv3 4
LVX C05 5.789 0.808 -1.493 ETKDGv3 5
LVX C06 4.730 0.854 -0.409 ETKDGv3 6
LVX O34 5.027 1.191 0.769 ETKDGv3 7
LVX C35 5.852 -0.580 -2.166 ETKDGv3 8
LVX C36 6.525 -1.620 -1.266 ETKDGv3 9
LVX C37 7.946 -1.179 -0.906 ETKDGv3 10
LVX O10 2.780 -2.149 -0.127 ETKDGv3 11
LVX N07 3.366 0.549 -0.735 ETKDGv3 12
LVX C08 2.382 0.195 0.296 ETKDGv3 13
LVX C12 0.982 0.198 -0.267 ETKDGv3 14
LVX O33 0.750 -0.362 -1.374 ETKDGv3 15
LVX C09 2.709 -1.179 0.899 ETKDGv3 16
LVX C11 3.125 -3.397 0.432 ETKDGv3 17
LVX C14 -1.502 0.677 0.087 ETKDGv3 18
LVX C15 -2.213 -0.389 0.968 ETKDGv3 19
LVX N13 -0.094 0.777 0.490 ETKDGv3 20
LVX O25 -1.392 -1.514 1.164 ETKDGv3 21
LVX C16 -3.533 -0.834 0.384 ETKDGv3 22
LVX C26 -2.138 2.082 0.210 ETKDGv3 23
LVX C27 -3.543 2.161 -0.333 ETKDGv3 24
LVX C32 -4.680 2.414 0.589 ETKDGv3 25
LVX C31 -5.928 2.496 0.114 ETKDGv3 26
LVX C30 -6.183 2.330 -1.331 ETKDGv3 27
LVX C29 -5.164 2.107 -2.169 ETKDGv3 28
LVX C28 -3.782 2.027 -1.650 ETKDGv3 29
LVX O24 -3.569 -1.308 -0.785 ETKDGv3 30
LVX C19 -7.119 -0.947 1.601 ETKDGv3 31
LVX C22 -8.747 -0.896 3.514 ETKDGv3 32
LVX C18 -6.022 -1.180 0.612 ETKDGv3 33
LVX C21 -8.791 0.148 2.688 ETKDGv3 34
LVX N17 -4.736 -0.751 1.159 ETKDGv3 35
LVX N20 -7.851 0.121 1.602 ETKDGv3 36
LVX S23 -7.484 -2.026 2.968 ETKDGv3 37
LVX H1 7.807 1.483 -1.920 ETKDGv3 38
LVX H2 7.127 2.193 -0.433 ETKDGv3 39
LVX H3 5.465 1.536 -2.269 ETKDGv3 40
LVX H4 4.836 -0.936 -2.439 ETKDGv3 41
LVX H5 6.427 -0.497 -3.115 ETKDGv3 42
LVX H6 6.570 -2.593 -1.802 ETKDGv3 43
LVX H7 5.926 -1.769 -0.341 ETKDGv3 44
LVX H8 8.560 -1.116 -1.832 ETKDGv3 45
LVX H9 8.410 -1.941 -0.244 ETKDGv3 46
LVX H10 3.095 0.521 -1.744 ETKDGv3 47
LVX H11 2.432 0.955 1.106 ETKDGv3 48
LVX H12 3.681 -1.105 1.437 ETKDGv3 49
LVX H13 1.917 -1.444 1.638 ETKDGv3 50
LVX H14 3.168 -4.148 -0.383 ETKDGv3 51
LVX H15 4.130 -3.360 0.908 ETKDGv3 52
LVX H16 2.358 -3.736 1.163 ETKDGv3 53
LVX H18 -1.557 0.365 -0.979 ETKDGv3 54
LVX H25 -2.393 0.058 1.970 ETKDGv3 55
LVX H26 0.119 1.177 1.432 ETKDGv3 56
LVX H27 -1.175 -1.889 0.270 ETKDGv3 57
LVX H19 -2.121 2.403 1.275 ETKDGv3 58
LVX H20 -1.510 2.810 -0.349 ETKDGv3 59
LVX H24 -4.505 2.529 1.652 ETKDGv3 60
LVX H17 -6.755 2.681 0.788 ETKDGv3 61
LVX H23 -7.195 2.388 -1.709 ETKDGv3 62
LVX H22 -5.348 1.986 -3.228 ETKDGv3 63
LVX H21 -2.969 1.858 -2.345 ETKDGv3 64
LVX H28 -9.382 -1.025 4.379 ETKDGv3 65
LVX H29 -6.237 -0.616 -0.321 ETKDGv3 66
LVX H30 -5.978 -2.263 0.369 ETKDGv3 67
LVX H31 -9.483 0.968 2.826 ETKDGv3 68
LVX H32 -4.686 -0.363 2.129 ETKDGv3 69
#