Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : LOC

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 54


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O4 O O4 N N N 0 -1.225 2.491 -2.254
2 C12 C C12 N N N 0 -1.831 3.157 -1.442
3 C13 C C13 N N N 0 -2.839 4.177 -1.905
4 N1 N N1 N N N 0 -1.608 2.98 -0.124
5 C11 C C11 S N N 0 -0.632 1.985 0.326
6 C14 C C14 N N N 0 -1.307 0.631 0.402
7 C15 C C15 N N N 0 -2.649 0.637 0.478
8 C10 C C10 N N N 0 -0.076 2.411 1.67
9 C9 C C9 N N N 0 0.661 1.261 2.35
10 C8 C C8 N Y N 0 1.539 0.557 1.347
11 C7 C C7 N Y N 0 2.902 0.767 1.352
12 C5 C C5 N Y N 0 3.711 0.109 0.433
13 C3 C C3 N Y N 0 3.153 -0.764 -0.495
14 C1 C C1 N Y N 0 1.78 -0.977 -0.508
15 O1 O O1 N N N 0 1.227 -1.829 -1.411
16 C2 C C2 N N N 0 0.927 -1.298 -2.703
17 O2 O O2 N N N 0 3.951 -1.408 -1.389
18 C4 C C4 N N N 0 4.478 -2.676 -0.993
19 O3 O O3 N N N 0 5.053 0.32 0.441
20 C6 C C6 N N N 0 5.562 1.229 1.419
21 C22 C C22 N Y N 0 0.973 -0.307 0.416
22 C21 C C21 N N N 0 -0.506 -0.512 0.39
23 C20 C C20 N N N 0 -0.948 -1.81 0.361
24 C19 C C19 N N N 0 -2.179 -2.356 0.378
25 C17 C C17 N N N 0 -3.386 -1.735 0.459
26 C16 C C16 N N N 0 -3.582 -0.36 0.535
27 O5 O O5 N N N 0 -4.742 0.004 0.67
28 O6 O O6 N N N 0 -4.49 -2.521 0.467
29 C18 C C18 N N N 0 -4.282 -3.932 0.389
30 H13 H H13 N N N 0 -2.886 4.173 -2.994
31 H13A H H13A N N N 0 -3.82 3.929 -1.499
32 H13B H H13B N N N 0 -2.542 5.166 -1.558
33 HN1 H HN1 N N N 0 -2.093 3.513 0.525
34 H11 H H11 N N N 0 0.184 1.936 -0.395
35 H15 H H15 N N N 0 -3.076 1.629 0.499
36 H10 H H10 N N N 0 0.615 3.242 1.524
37 H10A H H10A N N N 0 -0.896 2.738 2.309
38 H9 H H9 N N N 0 1.277 1.652 3.159
39 H9A H H9A N N N 0 -0.064 0.555 2.755
40 H7 H H7 N N N 0 3.342 1.443 2.071
41 H2 H H2 N N N 0 0.285 -0.424 -2.597
42 H2A H H2A N N N 0 1.852 -1.012 -3.202
43 H2B H H2B N N N 0 0.413 -2.055 -3.296
44 H4 H H4 N N N 0 5.025 -3.118 -1.825
45 H4A H H4A N N N 0 5.15 -2.542 -0.146
46 H4B H H4B N N N 0 3.659 -3.336 -0.706
47 H6 H H6 N N N 0 5.317 0.863 2.417
48 H6A H H6A N N N 0 6.644 1.306 1.316
49 H6B H H6B N N N 0 5.112 2.21 1.272
50 H20 H H20 N N N 0 -0.152 -2.538 0.316
51 H19 H H19 N N N 0 -2.212 -3.434 0.319
52 H18 H H18 N N N 0 -3.758 -4.172 -0.537
53 H18A H H18A N N N 0 -3.684 -4.259 1.24
54 H18B H H18B N N N 0 -5.245 -4.443 0.404