Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : LAB

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 56


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O5 O O5 N N N 0 -5.825 -2.017 0.645
2 C18 C C18 N N N 0 -5.133 -1.085 0.283
3 O4 O O4 N N N 0 -2.41 0.358 1.756
4 N1 N N1 N N N 0 -3.863 -1.176 -0.101
5 C16 C C16 R N N 0 -3.17 0.026 -0.505
6 C17 C C17 N N N 0 -4.075 1.261 -0.414
7 S1 S S1 N N N 0 -5.663 0.598 0.18
8 C15 C C15 R N N 0 -1.954 0.23 0.402
9 C14 C C14 N N N 0 -1.028 -0.98 0.31
10 C13 C C13 R N N 0 -0.425 -1.123 -1.083
11 O2 O O2 N N N 0 0.728 -1.997 -1.07
12 C12 C C12 N N N 0 -0.017 0.25 -1.629
13 C11 C C11 R N N 0 0.043 1.245 -0.47
14 O3 O O3 N N N 0 -1.279 1.432 0.035
15 C10 C C10 N N N 0 0.63 2.577 -0.937
16 C9 C C9 N N N 0 1.699 3.044 0.039
17 C8 C C8 S N N 0 3.118 2.623 -0.342
18 C20 C C20 N N N 0 3.126 1.457 -1.309
19 C7 C C7 N N N 0 3.89 2.359 0.914
20 C6 C C6 N N N 0 4.644 1.394 1.288
21 C5 C C5 N N N 0 5.058 0.13 0.607
22 C4 C C4 N N N 0 4.283 -1.056 1.189
23 C3 C C3 N N N 0 4.166 -2.157 0.175
24 C19 C C19 N N N 0 5.385 -3.014 -0.11
25 C2 C C2 N N N 0 3.049 -2.426 -0.486
26 C1 C C1 N N N 0 1.797 -1.682 -0.314
27 O1 O O1 N N N 0 1.715 -0.802 0.513
28 HN1 H HN1 N N N 0 -3.41 -2.034 -0.109
29 H16 H H16 N N N 0 -2.83 -0.088 -1.534
30 H171 H 1H17 N N N 0 -3.669 1.982 0.296
31 H172 H 2H17 N N N 0 -4.199 1.718 -1.395
32 HO4 H HO4 N N N 0 -1.7 0.491 2.399
33 H141 H 1H14 N N N 0 -0.241 -0.89 1.058
34 H142 H 2H14 N N N 0 -1.607 -1.883 0.539
35 H13 H H13 N N N 0 -1.175 -1.556 -1.756
36 H121 H 1H12 N N N 0 0.947 0.174 -2.122
37 H122 H 2H12 N N N 0 -0.763 0.585 -2.354
38 H11 H H11 N N N 0 0.667 0.849 0.334
39 H101 H 1H10 N N N 0 0.983 2.516 -1.956
40 H102 H 2H10 N N N 0 -0.188 3.321 -0.929
41 H91 H 1H9 N N N 0 1.667 4.139 0.107
42 H92 H 2H9 N N N 0 1.472 2.648 1.037
43 H8 H H8 N N N 0 3.589 3.488 -0.848
44 H7 H H7 N N N 0 3.787 3.166 1.681
45 H201 H 1H20 N N N 0 2.599 1.738 -2.221
46 H202 H 2H20 N N N 0 4.155 1.192 -1.551
47 H203 H 3H20 N N N 0 2.629 0.601 -0.851
48 H6 H H6 N N N 0 5.069 1.522 2.312
49 H51 H 1H5 N N N 0 4.983 0.155 -0.465
50 H52 H 2H5 N N N 0 6.129 -0.041 0.838
51 H41 H 1H4 N N N 0 4.849 -1.439 2.052
52 H42 H 2H4 N N N 0 3.316 -0.731 1.548
53 H191 H 1H19 N N N 0 5.391 -3.871 0.563
54 H192 H 2H19 N N N 0 5.351 -3.362 -1.142
55 H193 H 3H19 N N N 0 6.288 -2.424 0.045
56 H2 H H2 N N N 0 3.066 -3.251 -1.201