Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : KMG

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 35


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C01 C C1 N N N 0 4.187 1.172 2.18
2 C02 C C2 N Y N 0 3.852 0.826 0.752
3 C05 C C3 N Y N 0 2.832 0.056 -1.144
4 C06 C C4 N Y N 0 2.719 0.163 0.319
5 C07 C C5 N Y N 0 1.582 -0.379 0.955
6 C08 C C6 N Y N 0 0.62 -0.986 0.206
7 C11 C C7 N N N 0 -2.194 0.579 0.323
8 C12 C C8 N N N 0 -3.611 0.974 -0.097
9 C13 C C9 N N N 0 -3.759 2.495 -0.025
10 C14 C C10 N N N 0 -5.176 2.89 -0.444
11 C17 C C11 N Y N 0 0.73 -1.087 -1.189
12 C18 C C12 N Y N 0 1.798 -0.586 -1.858
13 N03 N N1 N Y N 0 4.599 1.112 -0.325
14 N04 N N2 N Y N 0 3.967 0.642 -1.482
15 N09 N N3 N N N 0 -0.505 -1.522 0.842
16 O15 O O1 N N N 0 -2.895 -1.855 1.161
17 O16 O O2 N N N 0 -1.946 -1.655 -1.115
18 S10 S S1 N N N 0 -2.018 -1.225 0.237
19 H1 H H1 N N N 0 4.754 0.356 2.628
20 H2 H H2 N N N 0 4.783 2.084 2.203
21 H3 H H3 N N N 0 3.265 1.326 2.742
22 H4 H H4 N N N 0 1.475 -0.314 2.028
23 H5 H H5 N N N 0 -1.473 1.046 -0.348
24 H6 H H6 N N N 0 -2.01 0.914 1.344
25 H7 H H7 N N N 0 -3.795 0.639 -1.118
26 H8 H H8 N N N 0 -4.332 0.506 0.574
27 H9 H H9 N N N 0 -3.576 2.83 0.996
28 H10 H H10 N N N 0 -3.038 2.962 -0.695
29 H11 H H11 N N N 0 -5.36 2.555 -1.465
30 H12 H H12 N N N 0 -5.898 2.422 0.226
31 H13 H H13 N N N 0 -5.282 3.974 -0.393
32 H14 H H14 N N N 0 -0.056 -1.577 -1.744
33 H15 H H15 N N N 0 1.856 -0.678 -2.932
34 H16 H H16 N N N 0 5.45 1.577 -0.305
35 H17 H H17 N N N 0 -0.399 -2.067 1.637