data_KMG
#
_chem_comp.id KMG
_chem_comp.name N-(3-methyl-2H-indazol-5-yl)butane-1-sulfonamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C12 H17 N3 O2 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-06-07
_chem_comp.pdbx_modified_date 2018-11-30
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 267.347
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code KMG
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5W2S
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
KMG C01 C1 C 0 1 N N N N N N 20.036 -18.244 -42.044 4.187 1.172 2.180 C01 KMG 1
KMG C02 C2 C 0 1 Y N N N N N 20.243 -19.215 -43.203 3.852 0.826 0.752 C02 KMG 2
KMG C05 C3 C 0 1 Y N N N N N 20.585 -21.074 -44.406 2.832 0.056 -1.144 C05 KMG 3
KMG C06 C4 C 0 1 Y N N N N N 20.448 -20.639 -43.098 2.719 0.163 0.319 C06 KMG 4
KMG C07 C5 C 0 1 Y N N N N N 20.524 -21.566 -42.030 1.582 -0.379 0.955 C07 KMG 5
KMG C08 C6 C 0 1 Y N N N N N 20.740 -22.917 -42.307 0.620 -0.986 0.206 C08 KMG 6
KMG C11 C7 C 0 1 N N N N N N 21.156 -22.406 -38.744 -2.194 0.579 0.323 C11 KMG 7
KMG C12 C8 C 0 1 N N N N N N 22.268 -23.097 -37.962 -3.611 0.974 -0.097 C12 KMG 8
KMG C13 C9 C 0 1 N N N N N N 23.287 -22.102 -37.408 -3.759 2.495 -0.025 C13 KMG 9
KMG C14 C10 C 0 1 N N N N N N 24.358 -22.792 -36.567 -5.176 2.890 -0.444 C14 KMG 10
KMG C17 C11 C 0 1 Y N N N N N 20.879 -23.356 -43.636 0.730 -1.087 -1.189 C17 KMG 11
KMG C18 C12 C 0 1 Y N N N N N 20.805 -22.446 -44.684 1.798 -0.586 -1.858 C18 KMG 12
KMG N03 N1 N 0 1 Y N N N N N 20.266 -18.886 -44.485 4.599 1.112 -0.325 N03 KMG 13
KMG N04 N2 N 0 1 Y N N N N N 20.472 -19.994 -45.207 3.967 0.642 -1.482 N04 KMG 14
KMG N09 N3 N 0 1 N N N N N N 20.831 -23.892 -41.237 -0.505 -1.522 0.842 N09 KMG 15
KMG O15 O1 O 0 1 N N N N N N 20.082 -24.893 -38.965 -2.895 -1.855 1.161 O15 KMG 16
KMG O16 O2 O 0 1 N N N N N N 18.780 -23.197 -39.765 -1.946 -1.655 -1.115 O16 KMG 17
KMG S10 S1 S 0 1 N N N N N N 20.178 -23.623 -39.682 -2.018 -1.225 0.237 S10 KMG 18
KMG H1 H1 H 0 1 N N N N N N 18.962 -18.161 -41.822 4.754 0.356 2.628 H1 KMG 19
KMG H2 H2 H 0 1 N N N N N N 20.567 -18.616 -41.155 4.783 2.084 2.203 H2 KMG 20
KMG H3 H3 H 0 1 N N N N N N 20.430 -17.255 -42.320 3.265 1.326 2.742 H3 KMG 21
KMG H4 H4 H 0 1 N N N N N N 20.416 -21.230 -41.009 1.475 -0.314 2.028 H4 KMG 22
KMG H5 H5 H 0 1 N N N N N N 21.602 -21.684 -39.444 -1.473 1.046 -0.348 H5 KMG 23
KMG H6 H6 H 0 1 N N N N N N 20.496 -21.876 -38.042 -2.010 0.914 1.344 H6 KMG 24
KMG H7 H7 H 0 1 N N N N N N 21.820 -23.650 -37.123 -3.795 0.639 -1.118 H7 KMG 25
KMG H8 H8 H 0 1 N N N N N N 22.787 -23.801 -38.630 -4.332 0.506 0.574 H8 KMG 26
KMG H9 H9 H 0 1 N N N N N N 23.773 -21.586 -38.249 -3.576 2.830 0.996 H9 KMG 27
KMG H10 H10 H 0 1 N N N N N N 22.761 -21.367 -36.781 -3.038 2.962 -0.695 H10 KMG 28
KMG H11 H11 H 0 1 N N N N N N 25.068 -22.042 -36.189 -5.360 2.555 -1.465 H11 KMG 29
KMG H12 H12 H 0 1 N N N N N N 23.883 -23.307 -35.719 -5.898 2.422 0.226 H12 KMG 30
KMG H13 H13 H 0 1 N N N N N N 24.895 -23.525 -37.187 -5.282 3.974 -0.393 H13 KMG 31
KMG H14 H14 H 0 1 N N N N N N 21.044 -24.403 -43.843 -0.056 -1.577 -1.744 H14 KMG 32
KMG H15 H15 H 0 1 N N N N N N 20.915 -22.783 -45.704 1.856 -0.678 -2.932 H15 KMG 33
KMG H16 H16 H 0 1 N N N N N N 20.149 -17.963 -44.853 5.450 1.577 -0.305 H16 KMG 34
KMG H17 H17 H 0 1 N N N N N N 20.392 -24.722 -41.581 -0.399 -2.067 1.637 H17 KMG 35
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
KMG N04 N03 SING Y N 1
KMG N04 C05 DOUB Y N 2
KMG C18 C05 SING Y N 3
KMG C18 C17 DOUB Y N 4
KMG N03 C02 SING Y N 5
KMG C05 C06 SING Y N 6
KMG C17 C08 SING Y N 7
KMG C02 C06 DOUB Y N 8
KMG C02 C01 SING N N 9
KMG C06 C07 SING Y N 10
KMG C08 C07 DOUB Y N 11
KMG C08 N09 SING N N 12
KMG N09 S10 SING N N 13
KMG O16 S10 DOUB N N 14
KMG S10 O15 DOUB N N 15
KMG S10 C11 SING N N 16
KMG C11 C12 SING N N 17
KMG C12 C13 SING N N 18
KMG C13 C14 SING N N 19
KMG C01 H1 SING N N 20
KMG C01 H2 SING N N 21
KMG C01 H3 SING N N 22
KMG C07 H4 SING N N 23
KMG C11 H5 SING N N 24
KMG C11 H6 SING N N 25
KMG C12 H7 SING N N 26
KMG C12 H8 SING N N 27
KMG C13 H9 SING N N 28
KMG C13 H10 SING N N 29
KMG C14 H11 SING N N 30
KMG C14 H12 SING N N 31
KMG C14 H13 SING N N 32
KMG C17 H14 SING N N 33
KMG C18 H15 SING N N 34
KMG N03 H16 SING N N 35
KMG N09 H17 SING N N 36
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
KMG SMILES ACDLabs 12.01 Cc2c1c(ccc(c1)NS(CCCC)(=O)=O)nn2
KMG InChI InChI 1.03 InChI=1S/C12H17N3O2S/c1-3-4-7-18(16,17)15-10-5-6-12-11(8-10)9(2)13-14-12/h5-6,8,15H,3-4,7H2,1-2H3,(H,13,14)
KMG InChIKey InChI 1.03 KOCNIUOZWPMKDF-UHFFFAOYSA-N
KMG SMILES_CANONICAL CACTVS 3.385 CCCC[S](=O)(=O)Nc1ccc2n[nH]c(C)c2c1
KMG SMILES CACTVS 3.385 CCCC[S](=O)(=O)Nc1ccc2n[nH]c(C)c2c1
KMG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CCCCS(=O)(=O)Nc1ccc2c(c1)c([nH]n2)C
KMG SMILES "OpenEye OEToolkits" 2.0.6 CCCCS(=O)(=O)Nc1ccc2c(c1)c([nH]n2)C
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
KMG "SYSTEMATIC NAME" ACDLabs 12.01 N-(3-methyl-2H-indazol-5-yl)butane-1-sulfonamide
KMG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 ~{N}-(3-methyl-2~{H}-indazol-5-yl)butane-1-sulfonamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
KMG 'Create component' 2017-06-07 RCSB
KMG 'Initial release' 2018-12-05 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
KMG C01 C 15.278 2.066 1
KMG C02 C 14.812 0.641 2
KMG C05 C 13.392 -1.316 3
KMG C06 C 13.392 0.184 4
KMG C07 C 12.093 0.934 5
KMG C08 C 10.794 0.184 6
KMG C11 C 6.897 -0.566 7
KMG C12 C 5.598 0.184 8
KMG C13 C 4.299 -0.566 9
KMG C14 C 3.000 0.184 10
KMG C17 C 10.794 -1.316 11
KMG C18 C 12.093 -2.066 12
KMG N03 N 15.687 -0.566 13
KMG N04 N 14.812 -1.774 14
KMG N09 N 9.495 0.934 15
KMG O15 O 8.946 -1.116 16
KMG O16 O 7.446 1.483 17
KMG S10 S 8.196 0.184 18
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
KMG N04 N03 SINGLE NONE 1
KMG N04 C05 DOUBLE NONE 2
KMG C18 C05 SINGLE NONE 3
KMG C18 C17 DOUBLE NONE 4
KMG N03 C02 SINGLE NONE 5
KMG C05 C06 SINGLE NONE 6
KMG C17 C08 SINGLE NONE 7
KMG C02 C06 DOUBLE NONE 8
KMG C02 C01 SINGLE NONE 9
KMG C06 C07 SINGLE NONE 10
KMG C08 C07 DOUBLE NONE 11
KMG C08 N09 SINGLE NONE 12
KMG N09 S10 SINGLE NONE 13
KMG O16 S10 DOUBLE NONE 14
KMG S10 O15 DOUBLE NONE 15
KMG S10 C11 SINGLE NONE 16
KMG C11 C12 SINGLE NONE 17
KMG C12 C13 SINGLE NONE 18
KMG C13 C14 SINGLE NONE 19
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
KMG MurckoScaffold S1 scaffold 'c1ccc2n[nH]cc2c1' InChI=1S/C7H6N2/c1-2-4-7-6(3-1)5-8-9-7/h1-5H,(H,8,9) BAXOFTOLAUCFNW-UHFFFAOYSA-N
KMG phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
KMG pyrazole F2 fragment 'c1cn[nH]c1' InChI=1S/C3H4N2/c1-2-4-5-3-1/h1-3H,(H,4,5) WTKZEGDFNFYCGP-UHFFFAOYSA-N
KMG Z55258068 F3 fragment CCCCS(=O)(=O)NC InChI=1S/C5H13NO2S/c1-3-4-5-9(7,8)6-2/h6H,3-5H2,1-2H3 CJUPBDDCEQLSBF-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
KMG C02 S1 1
KMG C05 S1 1
KMG C06 S1 1
KMG C07 S1 1
KMG C08 S1 1
KMG C17 S1 1
KMG C18 S1 1
KMG N03 S1 1
KMG N04 S1 1
KMG C05 F1 1
KMG C18 F1 1
KMG C17 F1 1
KMG C08 F1 1
KMG C07 F1 1
KMG C06 F1 1
KMG C02 F2 1
KMG C06 F2 1
KMG C05 F2 1
KMG N04 F2 1
KMG N03 F2 1
KMG C14 F3 1
KMG C13 F3 1
KMG C12 F3 1
KMG C11 F3 1
KMG S10 F3 1
KMG O16 F3 1
KMG O15 F3 1
KMG N09 F3 1
KMG C08 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id KMG
_pdbe_chem_comp_rdkit_properties.exactmw 267.104
_pdbe_chem_comp_rdkit_properties.amw 267.354
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 5
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 18
_pdbe_chem_comp_rdkit_properties.NumAtoms 35
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.417
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 130.646
_pdbe_chem_comp_rdkit_properties.tpsa 74.850
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.549
_pdbe_chem_comp_rdkit_properties.CrippenMR 69.852
_pdbe_chem_comp_rdkit_properties.chi0v 9.383
_pdbe_chem_comp_rdkit_properties.chi1v 5.781
_pdbe_chem_comp_rdkit_properties.chi2v 2.503
_pdbe_chem_comp_rdkit_properties.chi3v 2.503
_pdbe_chem_comp_rdkit_properties.chi4v 1.622
_pdbe_chem_comp_rdkit_properties.chi0n 25.566
_pdbe_chem_comp_rdkit_properties.chi1n 12.735
_pdbe_chem_comp_rdkit_properties.chi2n 1.720
_pdbe_chem_comp_rdkit_properties.chi3n 1.720
_pdbe_chem_comp_rdkit_properties.chi4n 1.065
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.560
_pdbe_chem_comp_rdkit_properties.kappa1 3.304
_pdbe_chem_comp_rdkit_properties.kappa2 4.974
_pdbe_chem_comp_rdkit_properties.kappa3 2.815
_pdbe_chem_comp_rdkit_properties.Phi 0.913
#
_pdbe_chem_comp_external_mappings.comp_id KMG
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 135121350
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
KMG C01 -5.594 -0.997 0.542 ETKDGv3 1
KMG C02 -4.786 0.007 -0.213 ETKDGv3 2
KMG C05 -3.159 1.195 -1.117 ETKDGv3 3
KMG C06 -3.479 0.191 -0.143 ETKDGv3 4
KMG C07 -2.426 -0.436 0.657 ETKDGv3 5
KMG C08 -1.146 -0.036 0.468 ETKDGv3 6
KMG C11 2.215 -0.832 -0.441 ETKDGv3 7
KMG C12 3.461 -0.059 -0.892 ETKDGv3 8
KMG C13 4.683 -0.349 -0.010 ETKDGv3 9
KMG C14 5.928 0.347 -0.551 ETKDGv3 10
KMG C17 -0.823 1.032 -0.554 ETKDGv3 11
KMG C18 -1.774 1.616 -1.309 ETKDGv3 12
KMG N03 -5.292 0.873 -1.228 ETKDGv3 13
KMG N04 -4.209 1.594 -1.756 ETKDGv3 14
KMG N09 -0.110 -0.652 1.257 ETKDGv3 15
KMG O15 2.312 -0.961 2.240 ETKDGv3 16
KMG O16 1.764 1.223 1.296 ETKDGv3 17
KMG S10 1.576 -0.260 1.133 ETKDGv3 18
KMG H1 -6.675 -0.766 0.440 ETKDGv3 19
KMG H2 -5.323 -0.972 1.618 ETKDGv3 20
KMG H3 -5.398 -2.011 0.136 ETKDGv3 21
KMG H4 -2.676 -1.202 1.381 ETKDGv3 22
KMG H5 1.424 -0.709 -1.210 ETKDGv3 23
KMG H6 2.441 -1.918 -0.371 ETKDGv3 24
KMG H7 3.245 1.031 -0.898 ETKDGv3 25
KMG H8 3.691 -0.361 -1.937 ETKDGv3 26
KMG H9 4.501 0.012 1.024 ETKDGv3 27
KMG H10 4.871 -1.444 0.026 ETKDGv3 28
KMG H11 5.773 1.447 -0.580 ETKDGv3 29
KMG H12 6.794 0.128 0.109 ETKDGv3 30
KMG H13 6.161 -0.017 -1.574 ETKDGv3 31
KMG H14 0.197 1.349 -0.707 ETKDGv3 32
KMG H15 -1.519 2.373 -2.040 ETKDGv3 33
KMG H16 -6.280 0.955 -1.554 ETKDGv3 34
KMG H17 -0.368 -1.388 1.952 ETKDGv3 35
#