Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : K8Y

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 31


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N Y N 0 -1.094 -2.213 0.091
2 C13 C C2 N N N 0 -4.394 -0.435 0.272
3 C17 C C3 N N N 0 -2.596 1.757 -0.301
4 C20 C C4 N Y N 0 -0.713 0.133 -0.319
5 C02 C C5 N N N 0 5.771 0.266 0.049
6 C04 C C6 N N N 0 4.305 0.481 0.321
7 C05 C C7 N N N 0 3.505 -0.704 -0.223
8 C06 C C8 N N N 0 2.039 -0.489 0.049
9 C09 C C9 N Y N 0 -0.226 -1.163 -0.191
10 C11 C C10 N Y N 0 -2.445 -1.98 0.24
11 C12 C C11 N Y N 0 -2.948 -0.686 0.114
12 C16 C C12 N Y N 0 -2.072 0.381 -0.166
13 N08 N N1 N N N 0 1.138 -1.411 -0.344
14 O01 O O1 N N N 0 6.668 1.184 0.441
15 O03 O O2 N N N 0 6.139 -0.734 -0.521
16 O07 O O3 N N N 0 1.669 0.514 0.622
17 O14 O O4 N N N 0 -5.283 -1.128 -0.467
18 O15 O O5 N N N 0 -4.783 0.396 1.069
19 O18 O O6 N N N 0 -1.745 2.791 -0.447
20 O19 O O7 N N N 0 -3.794 1.956 -0.282
21 H1 H H1 N N N 0 -0.708 -3.217 0.188
22 H2 H H2 N N N 0 -0.036 0.946 -0.537
23 H3 H H3 N N N 0 4.143 0.566 1.396
24 H4 H H4 N N N 0 3.975 1.397 -0.169
25 H5 H H5 N N N 0 3.667 -0.789 -1.298
26 H6 H H6 N N N 0 3.835 -1.62 0.267
27 H7 H H7 N N N 0 -3.114 -2.8 0.454
28 H8 H H8 N N N 0 1.438 -2.247 -0.734
29 H9 H H9 N N N 0 7.597 1.002 0.244
30 H10 H H10 N N N 0 -6.219 -0.928 -0.328
31 H11 H H11 N N N 0 -2.134 3.672 -0.531