Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : HRN

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 93


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C2 C C1 N Y N 0 -5.502 -0.449 1.646
2 C3 C C2 N Y N 0 -5.201 0.678 0.903
3 C42 C C3 N Y N 0 3.45 5.035 0.642
4 C44 C C4 N Y N 0 2.055 4.958 0.706
5 C45 C C5 N Y N 0 1.427 3.709 0.742
6 C47 C C6 N N N 0 1.249 6.191 0.735
7 C52 C C7 N N N 0 5.262 1.424 1.773
8 C55 C C8 N N N 0 5.981 0.073 1.791
9 C58 C C9 N N N 0 6.76 -0.102 0.485
10 C60 C C10 N N N 0 5.792 0.006 -0.696
11 C12 C C11 S N N 0 -3.772 1.14 0.779
12 C15 C C12 N Y N 0 -3.955 1.852 -1.624
13 C18 C C13 N Y N 0 -2.35 0.726 -2.545
14 C19 C C14 N Y N 0 -2.354 0.408 -1.194
15 C20 C C15 N Y N 0 -1.447 -0.518 -0.502
16 C21 C C16 N Y N 0 -0.233 -0.205 0.094
17 C24 C C17 N Y N 0 -0.527 -2.425 0.411
18 C25 C C18 N Y N 0 -1.65 -1.96 -0.297
19 C26 C C19 N Y N 0 -2.666 -2.848 -0.654
20 C28 C C20 N Y N 0 -2.567 -4.167 -0.314
21 C30 C C21 N Y N 0 -1.461 -4.633 0.386
22 CL1 CL CL1 N N N 0 -4.234 -1.329 2.441
23 C4 C C22 N Y N 0 -6.211 1.381 0.274
24 C6 C C23 N Y N 0 -7.522 0.959 0.387
25 C8 C C24 N Y N 0 -7.825 -0.168 1.131
26 C9 C C25 N Y N 0 -6.814 -0.873 1.76
27 CL2 CL CL2 N N N 0 -9.472 -0.698 1.273
28 N14 N N1 N Y N 0 -3.379 1.138 -0.633
29 N17 N N2 N Y N 0 -3.347 1.605 -2.752
30 N22 N N3 N Y N 0 0.31 -1.355 0.635
31 C31 C C26 N Y N 0 -0.446 -3.774 0.748
32 N36 N N4 N N N 0 1.562 1.303 0.752
33 CL3 CL CL3 N N N 0 -1.357 -6.313 0.809
34 C34 C C27 N N N 0 0.373 1.125 0.141
35 O35 O O1 N N N 0 -0.195 2.072 -0.372
36 C38 C C28 N Y N 0 2.187 2.556 0.715
37 C39 C C29 N Y N 0 3.581 2.64 0.652
38 C40 C C30 N Y N 0 4.204 3.882 0.616
39 O48 O O2 N N N 0 1.855 7.394 0.7
40 O49 O O3 N N N 0 0.037 6.123 0.79
41 N51 N N5 N N N 0 4.348 1.478 0.625
42 C70 C C33 N N N 0 9.355 -2.85 0.851
43 C63 C C31 N N N 0 5.079 1.359 -0.643
44 N66 N N6 N N N 0 7.403 -1.419 0.472
45 C67 C C32 N N N 0 8.859 -1.483 0.372
46 C73 C C34 N N N 0 8.506 -3.936 0.176
47 O76 O O4 N N N 0 7.125 -3.755 0.592
48 C77 C C35 N N N 0 6.631 -2.507 0.557
49 O78 O O5 N N N 0 5.426 -2.361 0.599
50 C79 C C36 N Y N 0 -1.424 0.192 -3.569
51 C80 C C37 N Y N 0 -1.876 -0.038 -4.869
52 C82 C C38 N Y N 0 -1.008 -0.536 -5.819
53 C84 C C39 N Y N 0 0.307 -0.807 -5.486
54 C86 C C40 N Y N 0 0.761 -0.581 -4.199
55 C88 C C41 N Y N 0 -0.096 -0.078 -3.24
56 C90 C C42 N N N 0 -3.642 2.556 1.342
57 H1 H H1 N N N 0 3.936 5.999 0.609
58 H2 H H2 N N N 0 0.35 3.646 0.792
59 H3 H H3 N N N 0 4.695 1.546 2.695
60 H4 H H4 N N N 0 5.997 2.225 1.689
61 H5 H H5 N N N 0 6.671 0.04 2.634
62 H6 H H6 N N N 0 5.248 -0.728 1.888
63 H7 H H7 N N N 0 7.52 0.675 0.407
64 H8 H H8 N N N 0 6.347 -0.076 -1.631
65 H9 H H9 N N N 0 5.056 -0.797 -0.639
66 H10 H H10 N N N 0 -3.123 0.465 1.337
67 H11 H H11 N N N 0 -4.793 2.522 -1.503
68 H12 H H12 N N N 0 -3.529 -2.492 -1.198
69 H13 H H13 N N N 0 -3.355 -4.853 -0.591
70 H14 H H14 N N N 0 -5.976 2.262 -0.306
71 H15 H H15 N N N 0 -8.311 1.509 -0.105
72 H16 H H16 N N N 0 -7.049 -1.753 2.34
73 H17 H H17 N N N 0 1.156 -1.402 1.106
74 H18 H H18 N N N 0 0.41 -4.146 1.292
75 H19 H H19 N N N 0 1.984 0.563 1.216
76 H20 H H20 N N N 0 5.28 3.944 0.562
77 H21 H H21 N N N 0 1.284 8.174 0.721
78 H22 H H22 N N N 0 5.814 2.16 -0.715
79 H23 H H23 N N N 0 4.378 1.433 -1.474
80 H24 H H24 N N N 0 9.158 -1.332 -0.665
81 H25 H H25 N N N 0 9.299 -0.701 0.992
82 H26 H H26 N N N 0 10.402 -2.978 0.576
83 H27 H H27 N N N 0 9.248 -2.921 1.934
84 H28 H H28 N N N 0 8.58 -3.84 -0.908
85 H29 H H29 N N N 0 8.858 -4.922 0.482
86 H30 H H30 N N N 0 -2.902 0.172 -5.131
87 H31 H H31 N N N 0 -1.357 -0.715 -6.826
88 H32 H H32 N N N 0 0.982 -1.196 -6.233
89 H33 H H33 N N N 0 1.788 -0.795 -3.944
90 H34 H H34 N N N 0 0.261 0.102 -2.237
91 H35 H H35 N N N 0 -4.291 3.23 0.784
92 H36 H H36 N N N 0 -3.934 2.557 2.392
93 H37 H H37 N N N 0 -2.608 2.889 1.253