data_HRN
#
_chem_comp.id HRN
_chem_comp.name
"3-[[6-chloranyl-3-[3-[(1~{S})-1-(2,4-dichlorophenyl)ethyl]-5-phenyl-imidazol-4-yl]-1~{H}-indol-2-yl]carbonylamino]-4-[4-(2-oxidanylidene-1,3-oxazinan-3-yl)piperidin-1-yl]benzoic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C42 H37 Cl3 N6 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-12-18
_chem_comp.pdbx_modified_date 2019-05-10
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 812.139
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code HRN
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6Q9S
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
HRN C2 C1 C 0 1 Y N N N N N 51.062 -18.825 -75.386 -5.502 -0.449 1.646 C2 HRN 1
HRN C3 C2 C 0 1 Y N N N N N 50.605 -19.811 -74.500 -5.201 0.678 0.903 C3 HRN 2
HRN C42 C3 C 0 1 Y N N N N N 53.491 -25.436 -78.096 3.450 5.035 0.642 C42 HRN 3
HRN C44 C4 C 0 1 Y N N N N N 53.410 -24.087 -78.471 2.055 4.958 0.706 C44 HRN 4
HRN C45 C5 C 0 1 Y N N N N N 53.546 -23.090 -77.495 1.427 3.709 0.742 C45 HRN 5
HRN C47 C6 C 0 1 N N N N N N 53.150 -23.699 -79.911 1.249 6.191 0.735 C47 HRN 6
HRN C52 C7 C 0 1 N N N N N N 55.472 -25.417 -74.091 5.262 1.424 1.773 C52 HRN 7
HRN C55 C8 C 0 1 N N N N N N 55.686 -25.608 -72.573 5.981 0.073 1.791 C55 HRN 8
HRN C58 C9 C 0 1 N N N N N N 54.588 -26.543 -72.016 6.760 -0.102 0.485 C58 HRN 9
HRN C60 C10 C 0 1 N N N N N N 53.197 -25.893 -72.255 5.792 0.006 -0.696 C60 HRN 10
HRN C12 C11 C 0 1 N N S N N N 50.981 -21.280 -74.746 -3.772 1.140 0.779 C12 HRN 11
HRN C15 C12 C 0 1 Y N N N N N 50.756 -22.850 -72.866 -3.955 1.852 -1.624 C15 HRN 12
HRN C18 C13 C 0 1 Y N N N N N 52.444 -22.223 -71.604 -2.350 0.726 -2.545 C18 HRN 13
HRN C19 C14 C 0 1 Y N N N N N 52.413 -21.476 -72.721 -2.354 0.408 -1.194 C19 HRN 14
HRN C20 C15 C 0 1 Y N N N N N 53.326 -20.380 -73.101 -1.447 -0.518 -0.502 C20 HRN 15
HRN C21 C16 C 0 1 Y N N N N N 54.214 -20.241 -74.119 -0.233 -0.205 0.094 C21 HRN 16
HRN C24 C17 C 0 1 Y N N N N N 54.301 -18.354 -73.001 -0.527 -2.425 0.411 C24 HRN 17
HRN C25 C18 C 0 1 Y N N N N N 53.367 -19.103 -72.312 -1.650 -1.960 -0.297 C25 HRN 18
HRN C26 C19 C 0 1 Y N N N N N 52.727 -18.638 -71.158 -2.666 -2.848 -0.654 C26 HRN 19
HRN C28 C20 C 0 1 Y N N N N N 53.073 -17.354 -70.724 -2.567 -4.167 -0.314 C28 HRN 20
HRN C30 C21 C 0 1 Y N N N N N 54.013 -16.576 -71.427 -1.461 -4.633 0.386 C30 HRN 21
HRN CL1 CL1 CL 0 0 N N N N N N 52.006 -19.230 -76.806 -4.234 -1.329 2.441 CL1 HRN 22
HRN C4 C22 C 0 1 Y N N N N N 49.853 -19.441 -73.373 -6.211 1.381 0.274 C4 HRN 23
HRN C6 C23 C 0 1 Y N N N N N 49.534 -18.101 -73.155 -7.522 0.959 0.387 C6 HRN 24
HRN C8 C24 C 0 1 Y N N N N N 49.979 -17.136 -74.062 -7.825 -0.168 1.131 C8 HRN 25
HRN C9 C25 C 0 1 Y N N N N N 50.745 -17.489 -75.174 -6.814 -0.873 1.760 C9 HRN 26
HRN CL2 CL2 CL 0 0 N N N N N N 49.589 -15.455 -73.811 -9.472 -0.698 1.273 CL11 HRN 27
HRN N14 N1 N 0 1 Y N N N N N 51.382 -21.872 -73.458 -3.379 1.138 -0.633 N14 HRN 28
HRN N17 N2 N 0 1 Y N N N N N 51.329 -23.106 -71.796 -3.347 1.605 -2.752 N17 HRN 29
HRN N22 N3 N 0 1 Y N N N N N 54.740 -19.049 -74.063 0.310 -1.355 0.635 N22 HRN 30
HRN C31 C26 C 0 1 Y N N N N N 54.652 -17.067 -72.584 -0.446 -3.774 0.748 C31 HRN 31
HRN CL3 CL3 CL 0 0 N N N N N N 54.410 -14.962 -70.861 -1.357 -6.313 0.809 CL33 HRN 32
HRN C34 C27 C 0 1 N N N N N N 54.461 -21.194 -75.227 0.373 1.125 0.141 C34 HRN 33
HRN O35 O1 O 0 1 N N N N N N 55.118 -20.805 -76.182 -0.195 2.072 -0.372 O35 HRN 34
HRN N36 N4 N 0 1 N N N N N N 53.858 -22.398 -75.191 1.562 1.303 0.752 N36 HRN 35
HRN C38 C28 C 0 1 Y N N N N N 53.801 -23.418 -76.155 2.187 2.556 0.715 C38 HRN 36
HRN C39 C29 C 0 1 Y N N N N N 53.844 -24.751 -75.782 3.581 2.640 0.652 C39 HRN 37
HRN C40 C30 C 0 1 Y N N N N N 53.716 -25.769 -76.749 4.204 3.882 0.616 C40 HRN 38
HRN O48 O2 O 0 1 N N N N N N 53.223 -22.529 -80.240 1.855 7.394 0.700 O48 HRN 39
HRN O49 O3 O 0 1 N N N N N N 52.793 -24.641 -80.791 0.037 6.123 0.790 O49 HRN 40
HRN N51 N5 N 0 1 N N N N N N 54.067 -25.056 -74.433 4.348 1.478 0.625 N51 HRN 41
HRN C63 C31 C 0 1 N N N N N N 52.951 -25.785 -73.774 5.079 1.359 -0.643 C63 HRN 42
HRN N66 N6 N 0 1 N N N N N N 54.871 -26.837 -70.606 7.403 -1.419 0.472 N66 HRN 43
HRN C67 C32 C 0 1 N N N N N N 54.585 -25.871 -69.529 8.859 -1.483 0.372 C67 HRN 44
HRN C70 C33 C 0 1 N N N N N N 55.184 -26.245 -68.158 9.355 -2.850 0.851 C70 HRN 45
HRN C73 C34 C 0 1 N N N N N N 55.002 -27.762 -67.999 8.506 -3.936 0.176 C73 HRN 46
HRN O76 O4 O 0 1 N N N N N N 55.693 -28.464 -69.055 7.125 -3.755 0.592 O76 HRN 47
HRN C77 C35 C 0 1 N N N N N N 55.398 -28.068 -70.314 6.631 -2.507 0.557 C77 HRN 48
HRN O78 O5 O 0 1 N N N N N N 55.626 -28.895 -71.192 5.426 -2.361 0.599 O78 HRN 49
HRN C79 C36 C 0 1 Y N N N N N 53.366 -22.324 -70.408 -1.424 0.192 -3.569 C79 HRN 50
HRN C80 C37 C 0 1 Y N N N N N 52.821 -22.762 -69.194 -1.876 -0.038 -4.869 C80 HRN 51
HRN C82 C38 C 0 1 Y N N N N N 53.630 -22.903 -68.054 -1.008 -0.536 -5.819 C82 HRN 52
HRN C84 C39 C 0 1 Y N N N N N 55.003 -22.624 -68.128 0.307 -0.807 -5.486 C84 HRN 53
HRN C86 C40 C 0 1 Y N N N N N 55.559 -22.204 -69.346 0.761 -0.581 -4.199 C86 HRN 54
HRN C88 C41 C 0 1 Y N N N N N 54.749 -22.059 -70.485 -0.096 -0.078 -3.240 C88 HRN 55
HRN C90 C42 C 0 1 N N N N N N 49.890 -22.053 -75.514 -3.642 2.556 1.342 C90 HRN 56
HRN H1 H1 H 0 1 N N N N N N 53.381 -26.214 -78.837 3.936 5.999 0.609 H1 HRN 57
HRN H2 H2 H 0 1 N N N N N N 53.453 -22.052 -77.779 0.350 3.646 0.792 H2 HRN 58
HRN H3 H3 H 0 1 N N N N N N 55.729 -26.356 -74.603 4.695 1.546 2.695 H3 HRN 59
HRN H4 H4 H 0 1 N N N N N N 56.137 -24.614 -74.442 5.997 2.225 1.689 H4 HRN 60
HRN H5 H5 H 0 1 N N N N N N 56.675 -26.056 -72.395 6.671 0.040 2.634 H5 HRN 61
HRN H6 H6 H 0 1 N N N N N N 55.629 -24.632 -72.068 5.248 -0.728 1.888 H6 HRN 62
HRN H7 H7 H 0 1 N N N N N N 54.622 -27.482 -72.588 7.520 0.675 0.407 H7 HRN 63
HRN H8 H8 H 0 1 N N N N N N 53.176 -24.889 -71.805 6.347 -0.076 -1.631 H8 HRN 64
HRN H9 H9 H 0 1 N N N N N N 52.415 -26.516 -71.798 5.056 -0.797 -0.639 H9 HRN 65
HRN H10 H10 H 0 1 N N N N N N 51.871 -21.271 -75.393 -3.123 0.465 1.337 H10 HRN 66
HRN H11 H11 H 0 1 N N N N N N 49.880 -23.356 -73.246 -4.793 2.522 -1.503 H11 HRN 67
HRN H12 H12 H 0 1 N N N N N N 52.003 -19.240 -70.629 -3.529 -2.492 -1.198 H12 HRN 68
HRN H13 H13 H 0 1 N N N N N N 52.611 -16.952 -69.834 -3.355 -4.853 -0.591 H13 HRN 69
HRN H14 H14 H 0 1 N N N N N N 49.521 -20.195 -72.674 -5.976 2.262 -0.306 H14 HRN 70
HRN H15 H15 H 0 1 N N N N N N 48.949 -17.812 -72.294 -8.311 1.509 -0.105 H15 HRN 71
HRN H16 H16 H 0 1 N N N N N N 51.088 -16.731 -75.863 -7.049 -1.753 2.340 H16 HRN 72
HRN H17 H17 H 0 1 N N N N N N 55.393 -18.694 -74.732 1.156 -1.402 1.106 H17 HRN 73
HRN H18 H18 H 0 1 N N N N N N 55.378 -16.476 -73.123 0.410 -4.146 1.292 H18 HRN 74
HRN H19 H19 H 0 1 N N N N N N 53.372 -22.598 -74.340 1.984 0.563 1.216 H19 HRN 75
HRN H20 H20 H 0 1 N N N N N N 53.791 -26.805 -76.455 5.280 3.944 0.562 H20 HRN 76
HRN H21 H21 H 0 1 N N N N N N 52.995 -22.443 -81.158 1.284 8.174 0.721 H21 HRN 77
HRN H22 H22 H 0 1 N N N N N N 52.010 -25.243 -73.951 5.814 2.160 -0.715 H22 HRN 78
HRN H23 H23 H 0 1 N N N N N N 52.877 -26.796 -74.201 4.378 1.433 -1.474 H23 HRN 79
HRN H24 H24 H 0 1 N N N N N N 54.993 -24.894 -69.827 9.158 -1.332 -0.665 H24 HRN 80
HRN H25 H25 H 0 1 N N N N N N 53.493 -25.794 -69.417 9.299 -0.701 0.992 H25 HRN 81
HRN H26 H26 H 0 1 N N N N N N 56.253 -25.986 -68.127 10.402 -2.978 0.576 H26 HRN 82
HRN H27 H27 H 0 1 N N N N N N 54.654 -25.713 -67.354 9.248 -2.921 1.934 H27 HRN 83
HRN H28 H28 H 0 1 N N N N N N 53.930 -28.005 -68.043 8.580 -3.840 -0.908 H28 HRN 84
HRN H29 H29 H 0 1 N N N N N N 55.410 -28.076 -67.027 8.858 -4.922 0.482 H29 HRN 85
HRN H30 H30 H 0 1 N N N N N N 51.768 -22.994 -69.134 -2.902 0.172 -5.131 H30 HRN 86
HRN H31 H31 H 0 1 N N N N N N 53.195 -23.226 -67.120 -1.357 -0.715 -6.826 H31 HRN 87
HRN H32 H32 H 0 1 N N N N N N 55.628 -22.732 -67.254 0.982 -1.196 -6.233 H32 HRN 88
HRN H33 H33 H 0 1 N N N N N N 56.616 -21.991 -69.408 1.788 -0.795 -3.944 H33 HRN 89
HRN H34 H34 H 0 1 N N N N N N 55.186 -21.744 -71.421 0.261 0.102 -2.237 H34 HRN 90
HRN H35 H35 H 0 1 N N N N N N 50.212 -23.094 -75.661 -4.291 3.230 0.784 H35 HRN 91
HRN H36 H36 H 0 1 N N N N N N 48.954 -22.037 -74.936 -3.934 2.557 2.392 H36 HRN 92
HRN H37 H37 H 0 1 N N N N N N 49.725 -21.579 -76.493 -2.608 2.889 1.253 H37 HRN 93
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
HRN O49 C47 DOUB N N 1
HRN O48 C47 SING N N 2
HRN C47 C44 SING N N 3
HRN C44 C42 DOUB Y N 4
HRN C44 C45 SING Y N 5
HRN C42 C40 SING Y N 6
HRN C45 C38 DOUB Y N 7
HRN CL1 C2 SING N N 8
HRN C40 C39 DOUB Y N 9
HRN O35 C34 DOUB N N 10
HRN C38 C39 SING Y N 11
HRN C38 N36 SING N N 12
HRN C39 N51 SING N N 13
HRN C90 C12 SING N N 14
HRN C2 C9 DOUB Y N 15
HRN C2 C3 SING Y N 16
HRN C34 N36 SING N N 17
HRN C34 C21 SING N N 18
HRN C9 C8 SING Y N 19
HRN C12 C3 SING N N 20
HRN C12 N14 SING N N 21
HRN C3 C4 DOUB Y N 22
HRN N51 C52 SING N N 23
HRN N51 C63 SING N N 24
HRN C21 N22 SING Y N 25
HRN C21 C20 DOUB Y N 26
HRN C52 C55 SING N N 27
HRN N22 C24 SING Y N 28
HRN C8 CL2 SING N N 29
HRN C8 C6 DOUB Y N 30
HRN C63 C60 SING N N 31
HRN N14 C15 SING Y N 32
HRN N14 C19 SING Y N 33
HRN C4 C6 SING Y N 34
HRN C20 C19 SING N N 35
HRN C20 C25 SING Y N 36
HRN C24 C31 DOUB Y N 37
HRN C24 C25 SING Y N 38
HRN C15 N17 DOUB Y N 39
HRN C19 C18 DOUB Y N 40
HRN C31 C30 SING Y N 41
HRN C55 C58 SING N N 42
HRN C25 C26 DOUB Y N 43
HRN C60 C58 SING N N 44
HRN C58 N66 SING N N 45
HRN N17 C18 SING Y N 46
HRN C18 C79 SING N N 47
HRN C30 CL3 SING N N 48
HRN C30 C28 DOUB Y N 49
HRN O78 C77 DOUB N N 50
HRN C26 C28 SING Y N 51
HRN N66 C77 SING N N 52
HRN N66 C67 SING N N 53
HRN C88 C79 DOUB Y N 54
HRN C88 C86 SING Y N 55
HRN C79 C80 SING Y N 56
HRN C77 O76 SING N N 57
HRN C67 C70 SING N N 58
HRN C86 C84 DOUB Y N 59
HRN C80 C82 DOUB Y N 60
HRN O76 C73 SING N N 61
HRN C70 C73 SING N N 62
HRN C84 C82 SING Y N 63
HRN C42 H1 SING N N 64
HRN C45 H2 SING N N 65
HRN C52 H3 SING N N 66
HRN C52 H4 SING N N 67
HRN C55 H5 SING N N 68
HRN C55 H6 SING N N 69
HRN C58 H7 SING N N 70
HRN C60 H8 SING N N 71
HRN C60 H9 SING N N 72
HRN C12 H10 SING N N 73
HRN C15 H11 SING N N 74
HRN C26 H12 SING N N 75
HRN C28 H13 SING N N 76
HRN C4 H14 SING N N 77
HRN C6 H15 SING N N 78
HRN C9 H16 SING N N 79
HRN N22 H17 SING N N 80
HRN C31 H18 SING N N 81
HRN N36 H19 SING N N 82
HRN C40 H20 SING N N 83
HRN O48 H21 SING N N 84
HRN C63 H22 SING N N 85
HRN C63 H23 SING N N 86
HRN C67 H24 SING N N 87
HRN C67 H25 SING N N 88
HRN C70 H26 SING N N 89
HRN C70 H27 SING N N 90
HRN C73 H28 SING N N 91
HRN C73 H29 SING N N 92
HRN C80 H30 SING N N 93
HRN C82 H31 SING N N 94
HRN C84 H32 SING N N 95
HRN C86 H33 SING N N 96
HRN C88 H34 SING N N 97
HRN C90 H35 SING N N 98
HRN C90 H36 SING N N 99
HRN C90 H37 SING N N 100
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
HRN InChI InChI 1.03 InChI=1S/C42H37Cl3N6O5/c1-24(30-11-9-27(43)21-32(30)45)51-23-46-37(25-6-3-2-4-7-25)39(51)36-31-12-10-28(44)22-33(31)47-38(36)40(52)48-34-20-26(41(53)54)8-13-35(34)49-17-14-29(15-18-49)50-16-5-19-56-42(50)55/h2-4,6-13,20-24,29,47H,5,14-19H2,1H3,(H,48,52)(H,53,54)/t24-/m0/s1
HRN InChIKey InChI 1.03 GSVXCPWDMIREAJ-DEOSSOPVSA-N
HRN SMILES_CANONICAL CACTVS 3.385 C[C@H](n1cnc(c2ccccc2)c1c3c([nH]c4cc(Cl)ccc34)C(=O)Nc5cc(ccc5N6CCC(CC6)N7CCCOC7=O)C(O)=O)c8ccc(Cl)cc8Cl
HRN SMILES CACTVS 3.385 C[CH](n1cnc(c2ccccc2)c1c3c([nH]c4cc(Cl)ccc34)C(=O)Nc5cc(ccc5N6CCC(CC6)N7CCCOC7=O)C(O)=O)c8ccc(Cl)cc8Cl
HRN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 C[C@@H](c1ccc(cc1Cl)Cl)n2cnc(c2c3c4ccc(cc4[nH]c3C(=O)Nc5cc(ccc5N6CCC(CC6)N7CCCOC7=O)C(=O)O)Cl)c8ccccc8
HRN SMILES "OpenEye OEToolkits" 2.0.6 CC(c1ccc(cc1Cl)Cl)n2cnc(c2c3c4ccc(cc4[nH]c3C(=O)Nc5cc(ccc5N6CCC(CC6)N7CCCOC7=O)C(=O)O)Cl)c8ccccc8
#
_pdbx_chem_comp_identifier.comp_id HRN
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.6
_pdbx_chem_comp_identifier.identifier
"3-[[6-chloranyl-3-[3-[(1~{S})-1-(2,4-dichlorophenyl)ethyl]-5-phenyl-imidazol-4-yl]-1~{H}-indol-2-yl]carbonylamino]-4-[4-(2-oxidanylidene-1,3-oxazinan-3-yl)piperidin-1-yl]benzoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
HRN 'Create component' 2018-12-18 EBI
HRN 'Initial release' 2019-05-15 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
HRN C2 C 11.977 6.823 1
HRN C3 C 12.585 5.452 2
HRN C42 C 15.942 0.006 3
HRN C44 C 15.192 1.305 4
HRN C45 C 13.692 1.305 5
HRN C47 C 15.942 2.604 6
HRN C52 C 13.692 -3.891 7
HRN C55 C 12.942 -5.190 8
HRN C58 C 11.442 -5.190 9
HRN C60 C 10.692 -3.891 10
HRN C12 C 11.701 4.239 11
HRN C15 C 10.213 5.899 12
HRN C18 C 7.903 5.153 13
HRN C19 C 8.783 3.938 14
HRN C20 C 8.316 2.512 15
HRN C21 C 9.192 1.305 16
HRN C24 C 6.897 0.555 17
HRN C25 C 6.897 2.055 18
HRN C26 C 5.598 2.805 19
HRN C28 C 4.299 2.055 20
HRN C30 C 4.299 0.555 21
HRN CL1 Cl 10.486 6.982 22
HRN C4 C 14.077 5.292 23
HRN C6 C 14.960 6.504 24
HRN C8 C 14.353 7.875 25
HRN C9 C 12.861 8.035 26
HRN CL2 Cl 15.236 9.088 27
HRN N14 N 10.210 4.399 28
HRN N17 N 8.787 6.365 29
HRN N22 N 8.316 0.098 30
HRN C31 C 5.598 -0.195 31
HRN CL3 Cl 3.000 -0.195 32
HRN C34 C 10.692 1.305 33
HRN O35 O 11.442 2.604 34
HRN N36 N 11.442 0.006 35
HRN C38 C 12.942 0.006 36
HRN C39 C 13.692 -1.293 37
HRN C40 C 15.192 -1.293 38
HRN O48 O 15.192 3.903 39
HRN O49 O 17.442 2.604 40
HRN N51 N 12.942 -2.592 41
HRN C63 C 11.442 -2.592 42
HRN N66 N 10.692 -6.489 43
HRN C67 C 9.192 -6.489 44
HRN C70 C 8.442 -7.788 45
HRN C73 C 9.192 -9.088 46
HRN O76 O 10.692 -9.088 47
HRN C77 C 11.442 -7.788 48
HRN O78 O 12.942 -7.788 49
HRN C79 C 6.403 5.155 50
HRN C80 C 5.655 6.456 51
HRN C82 C 4.155 6.458 52
HRN C84 C 3.403 5.161 53
HRN C86 C 4.151 3.860 54
HRN C88 C 5.651 3.858 55
HRN C90 C 12.309 2.868 56
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
HRN O49 C47 DOUBLE NONE 1
HRN O48 C47 SINGLE NONE 2
HRN C47 C44 SINGLE NONE 3
HRN C44 C42 DOUBLE NONE 4
HRN C44 C45 SINGLE NONE 5
HRN C42 C40 SINGLE NONE 6
HRN C45 C38 DOUBLE NONE 7
HRN CL1 C2 SINGLE NONE 8
HRN C40 C39 DOUBLE NONE 9
HRN O35 C34 DOUBLE NONE 10
HRN C38 C39 SINGLE NONE 11
HRN C38 N36 SINGLE NONE 12
HRN C39 N51 SINGLE NONE 13
HRN C12 C90 SINGLE BEGINDASH 14
HRN C2 C9 DOUBLE NONE 15
HRN C2 C3 SINGLE NONE 16
HRN C34 N36 SINGLE NONE 17
HRN C34 C21 SINGLE NONE 18
HRN C9 C8 SINGLE NONE 19
HRN C12 C3 SINGLE NONE 20
HRN C12 N14 SINGLE NONE 21
HRN C3 C4 DOUBLE NONE 22
HRN N51 C52 SINGLE NONE 23
HRN N51 C63 SINGLE NONE 24
HRN C21 N22 SINGLE NONE 25
HRN C21 C20 DOUBLE NONE 26
HRN C52 C55 SINGLE NONE 27
HRN N22 C24 SINGLE NONE 28
HRN C8 CL2 SINGLE NONE 29
HRN C8 C6 DOUBLE NONE 30
HRN C63 C60 SINGLE NONE 31
HRN N14 C15 SINGLE NONE 32
HRN N14 C19 SINGLE NONE 33
HRN C4 C6 SINGLE NONE 34
HRN C20 C19 SINGLE NONE 35
HRN C20 C25 SINGLE NONE 36
HRN C24 C31 DOUBLE NONE 37
HRN C24 C25 SINGLE NONE 38
HRN C15 N17 DOUBLE NONE 39
HRN C19 C18 DOUBLE NONE 40
HRN C31 C30 SINGLE NONE 41
HRN C55 C58 SINGLE NONE 42
HRN C25 C26 DOUBLE NONE 43
HRN C60 C58 SINGLE NONE 44
HRN C58 N66 SINGLE NONE 45
HRN N17 C18 SINGLE NONE 46
HRN C18 C79 SINGLE NONE 47
HRN C30 CL3 SINGLE NONE 48
HRN C30 C28 DOUBLE NONE 49
HRN O78 C77 DOUBLE NONE 50
HRN C26 C28 SINGLE NONE 51
HRN N66 C77 SINGLE NONE 52
HRN N66 C67 SINGLE NONE 53
HRN C88 C79 SINGLE NONE 54
HRN C88 C86 DOUBLE NONE 55
HRN C79 C80 DOUBLE NONE 56
HRN C77 O76 SINGLE NONE 57
HRN C67 C70 SINGLE NONE 58
HRN C86 C84 SINGLE NONE 59
HRN C80 C82 SINGLE NONE 60
HRN O76 C73 SINGLE NONE 61
HRN C70 C73 SINGLE NONE 62
HRN C84 C82 DOUBLE NONE 63
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
HRN MurckoScaffold S1 scaffold 'O=C(Nc1ccccc1N1CCC(N2CCCOC2=O)CC1)c1[nH]c2ccccc2c1-c1c(-c2ccccc2)ncn1Cc1ccccc1' InChI=1S/C40H38N6O3/c47-39(43-33-18-9-10-19-34(33)44-23-20-30(21-24-44)46-22-11-25-49-40(46)48)37-35(31-16-7-8-17-32(31)42-37)38-36(29-14-5-2-6-15-29)41-27-45(38)26-28-12-3-1-4-13-28/h1-10,12-19,27,30,42H,11,20-26H2,(H,43,47) MHKKECBEZDDQKS-UHFFFAOYSA-N
HRN amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
HRN imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
HRN indole F3 fragment 'c1ccc2[nH]ccc2c1' InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H SIKJAQJRHWYJAI-UHFFFAOYSA-N
HRN phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
HRN pyrrole F5 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
HRN C2 S1 1
HRN C3 S1 1
HRN C42 S1 1
HRN C44 S1 1
HRN C45 S1 1
HRN C52 S1 1
HRN C55 S1 1
HRN C58 S1 1
HRN C60 S1 1
HRN C12 S1 1
HRN C15 S1 1
HRN C18 S1 1
HRN C19 S1 1
HRN C20 S1 1
HRN C21 S1 1
HRN C24 S1 1
HRN C25 S1 1
HRN C26 S1 1
HRN C28 S1 1
HRN C30 S1 1
HRN C4 S1 1
HRN C6 S1 1
HRN C8 S1 1
HRN C9 S1 1
HRN N14 S1 1
HRN N17 S1 1
HRN N22 S1 1
HRN C31 S1 1
HRN C34 S1 1
HRN O35 S1 1
HRN N36 S1 1
HRN C38 S1 1
HRN C39 S1 1
HRN C40 S1 1
HRN N51 S1 1
HRN C63 S1 1
HRN N66 S1 1
HRN C67 S1 1
HRN C70 S1 1
HRN C73 S1 1
HRN O76 S1 1
HRN C77 S1 1
HRN O78 S1 1
HRN C79 S1 1
HRN C80 S1 1
HRN C82 S1 1
HRN C84 S1 1
HRN C86 S1 1
HRN C88 S1 1
HRN N36 F1 1
HRN C34 F1 1
HRN O35 F1 1
HRN C21 F1 1
HRN C18 F2 1
HRN C19 F2 1
HRN N14 F2 1
HRN C15 F2 1
HRN N17 F2 1
HRN C24 F3 1
HRN C25 F3 1
HRN C20 F3 1
HRN C21 F3 1
HRN N22 F3 1
HRN C26 F3 1
HRN C28 F3 1
HRN C30 F3 1
HRN C31 F3 1
HRN C2 F4 1
HRN C9 F4 1
HRN C8 F4 1
HRN C6 F4 1
HRN C4 F4 1
HRN C3 F4 1
HRN C42 F4 2
HRN C44 F4 2
HRN C45 F4 2
HRN C38 F4 2
HRN C39 F4 2
HRN C40 F4 2
HRN C24 F4 3
HRN C31 F4 3
HRN C30 F4 3
HRN C28 F4 3
HRN C26 F4 3
HRN C25 F4 3
HRN C79 F4 4
HRN C88 F4 4
HRN C86 F4 4
HRN C84 F4 4
HRN C82 F4 4
HRN C80 F4 4
HRN C21 F5 1
HRN C20 F5 1
HRN C25 F5 1
HRN C24 F5 1
HRN N22 F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id HRN
_pdbe_chem_comp_rdkit_properties.exactmw 810.189
_pdbe_chem_comp_rdkit_properties.amw 812.154
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 11
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 10
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 8
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 56
_pdbe_chem_comp_rdkit_properties.NumAtoms 93
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 14
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.238
_pdbe_chem_comp_rdkit_properties.NumRings 8
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 6
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 389.480
_pdbe_chem_comp_rdkit_properties.tpsa 132.790
_pdbe_chem_comp_rdkit_properties.CrippenClogP 7.916
_pdbe_chem_comp_rdkit_properties.CrippenMR 212.205
_pdbe_chem_comp_rdkit_properties.chi0v 29.126
_pdbe_chem_comp_rdkit_properties.chi1v 16.030
_pdbe_chem_comp_rdkit_properties.chi2v 7.967
_pdbe_chem_comp_rdkit_properties.chi3v 7.967
_pdbe_chem_comp_rdkit_properties.chi4v 5.525
_pdbe_chem_comp_rdkit_properties.chi0n 63.858
_pdbe_chem_comp_rdkit_properties.chi1n 33.198
_pdbe_chem_comp_rdkit_properties.chi2n 7.305
_pdbe_chem_comp_rdkit_properties.chi3n 7.305
_pdbe_chem_comp_rdkit_properties.chi4n 4.967
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -5.490
_pdbe_chem_comp_rdkit_properties.kappa1 13.861
_pdbe_chem_comp_rdkit_properties.kappa2 15.568
_pdbe_chem_comp_rdkit_properties.kappa3 7.178
_pdbe_chem_comp_rdkit_properties.Phi 3.853
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
HRN UniChem ChEMBL CHEMBL5180980
HRN UniChem SureChEMBL 14335100
HRN UniChem BindingDb 50605104
HRN UniChem PubChem 71145218
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
HRN C2 -3.920 0.940 -2.954 ETKDGv3 1
HRN C3 -3.117 -0.307 -2.752 ETKDGv3 2
HRN C42 3.607 1.138 -4.307 ETKDGv3 3
HRN C44 2.415 1.724 -4.515 ETKDGv3 4
HRN C45 1.492 1.909 -3.367 ETKDGv3 5
HRN C47 2.006 2.168 -5.866 ETKDGv3 6
HRN C52 3.914 1.389 0.415 ETKDGv3 7
HRN C55 4.263 0.706 1.744 ETKDGv3 8
HRN C58 3.219 -0.380 2.076 ETKDGv3 9
HRN C60 3.053 -1.436 0.949 ETKDGv3 10
HRN C12 -1.600 -0.292 -2.860 ETKDGv3 11
HRN C15 -0.551 -2.195 -1.427 ETKDGv3 12
HRN C18 -0.872 -1.339 0.542 ETKDGv3 13
HRN C19 -1.181 -0.371 -0.319 ETKDGv3 14
HRN C20 -1.867 0.896 0.001 ETKDGv3 15
HRN C21 -1.471 2.144 -0.329 ETKDGv3 16
HRN C24 -3.575 2.377 0.474 ETKDGv3 17
HRN C25 -3.224 0.985 0.530 ETKDGv3 18
HRN C26 -4.106 0.045 0.880 ETKDGv3 19
HRN C28 -5.477 0.490 1.246 ETKDGv3 20
HRN C30 -5.809 1.801 1.189 ETKDGv3 21
HRN CL1 -3.184 2.447 -3.492 ETKDGv3 22
HRN C4 -3.759 -1.444 -2.415 ETKDGv3 23
HRN C6 -5.217 -1.447 -2.186 ETKDGv3 24
HRN C8 -5.920 -0.317 -2.319 ETKDGv3 25
HRN C9 -5.242 0.927 -2.733 ETKDGv3 26
HRN CL2 -7.645 -0.306 -2.003 ETKDGv3 27
HRN N14 -0.984 -0.851 -1.646 ETKDGv3 28
HRN N17 -0.471 -2.507 -0.174 ETKDGv3 29
HRN N22 -2.486 3.120 -0.044 ETKDGv3 30
HRN C31 -4.802 2.813 0.765 ETKDGv3 31
HRN CL3 -7.437 2.314 1.590 ETKDGv3 32
HRN C34 -0.197 2.515 -0.982 ETKDGv3 33
HRN O35 -0.078 3.667 -1.478 ETKDGv3 34
HRN N36 0.911 1.603 -1.027 ETKDGv3 35
HRN C38 1.839 1.512 -2.126 ETKDGv3 36
HRN C39 3.163 0.862 -1.918 ETKDGv3 37
HRN C40 3.991 0.684 -2.958 ETKDGv3 38
HRN O48 0.756 2.751 -6.059 ETKDGv3 39
HRN O49 2.778 2.022 -6.852 ETKDGv3 40
HRN N51 3.553 0.405 -0.615 ETKDGv3 41
HRN C63 3.726 -1.031 -0.370 ETKDGv3 42
HRN N66 3.509 -1.015 3.378 ETKDGv3 43
HRN C67 2.494 -0.928 4.440 ETKDGv3 44
HRN C70 3.094 -1.179 5.826 ETKDGv3 45
HRN C73 3.873 -2.491 5.822 ETKDGv3 46
HRN O76 4.887 -2.457 4.824 ETKDGv3 47
HRN C77 4.685 -1.831 3.592 ETKDGv3 48
HRN O78 5.552 -1.969 2.689 ETKDGv3 49
HRN C79 -0.988 -1.306 2.018 ETKDGv3 50
HRN C80 -0.775 -0.177 2.724 ETKDGv3 51
HRN C82 -0.913 -0.179 4.195 ETKDGv3 52
HRN C84 -1.220 -1.311 4.839 ETKDGv3 53
HRN C86 -1.421 -2.560 4.079 ETKDGv3 54
HRN C88 -1.309 -2.560 2.745 ETKDGv3 55
HRN C90 -1.127 -1.006 -4.131 ETKDGv3 56
HRN H1 4.303 0.981 -5.122 ETKDGv3 57
HRN H2 0.515 2.334 -3.552 ETKDGv3 58
HRN H3 3.064 2.084 0.583 ETKDGv3 59
HRN H4 4.783 1.988 0.068 ETKDGv3 60
HRN H5 4.284 1.466 2.555 ETKDGv3 61
HRN H6 5.279 0.268 1.663 ETKDGv3 62
HRN H7 2.244 0.156 2.145 ETKDGv3 63
HRN H8 3.446 -2.429 1.255 ETKDGv3 64
HRN H9 1.969 -1.581 0.760 ETKDGv3 65
HRN H10 -1.246 0.751 -2.945 ETKDGv3 66
HRN H11 -0.328 -2.899 -2.216 ETKDGv3 67
HRN H12 -3.848 -1.006 0.865 ETKDGv3 68
HRN H13 -6.213 -0.247 1.540 ETKDGv3 69
HRN H14 -3.214 -2.366 -2.264 ETKDGv3 70
HRN H15 -5.707 -2.364 -1.885 ETKDGv3 71
HRN H16 -5.826 1.829 -2.866 ETKDGv3 72
HRN H17 -2.468 4.140 -0.264 ETKDGv3 73
HRN H18 -5.060 3.860 0.674 ETKDGv3 74
HRN H19 1.057 0.981 -0.202 ETKDGv3 75
HRN H20 4.954 0.210 -2.816 ETKDGv3 76
HRN H21 0.462 3.058 -6.979 ETKDGv3 77
HRN H22 3.287 -1.629 -1.199 ETKDGv3 78
HRN H23 4.812 -1.262 -0.321 ETKDGv3 79
HRN H24 2.031 0.082 4.443 ETKDGv3 80
HRN H25 1.699 -1.677 4.238 ETKDGv3 81
HRN H26 3.776 -0.343 6.095 ETKDGv3 82
HRN H27 2.280 -1.228 6.582 ETKDGv3 83
HRN H28 3.182 -3.337 5.614 ETKDGv3 84
HRN H29 4.342 -2.656 6.815 ETKDGv3 85
HRN H30 -0.477 0.742 2.239 ETKDGv3 86
HRN H31 -0.753 0.735 4.751 ETKDGv3 87
HRN H32 -1.313 -1.315 5.918 ETKDGv3 88
HRN H33 -1.660 -3.476 4.604 ETKDGv3 89
HRN H34 -1.465 -3.481 2.198 ETKDGv3 90
HRN H35 -0.017 -1.000 -4.176 ETKDGv3 91
HRN H36 -1.516 -0.475 -5.027 ETKDGv3 92
HRN H37 -1.488 -2.055 -4.159 ETKDGv3 93
#