Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : HCI

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 21


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 2.847 0.001 -0.114
2 O1 O O1 N N N 0 3.156 0.009 1.054
3 O2 O O2 N N Y 0 3.799 -0.011 -1.06
4 C2 C C2 N N N 0 1.393 -0.002 -0.509
5 C3 C C3 N N N 0 0.523 0.006 0.749
6 C1' C C1' N Y N 0 -0.932 0.003 0.355
7 C2' C C2' N Y N 0 -1.598 -1.196 0.182
8 C3' C C3' N Y N 0 -2.932 -1.199 -0.18
9 C4' C C4' N Y N 0 -3.6 -0.004 -0.37
10 C5' C C5' N Y N 0 -2.934 1.195 -0.196
11 C6' C C6' N Y N 0 -1.601 1.198 0.171
12 HO2 H HO2 N N Y 0 4.718 -0.012 -0.758
13 H21 H H21 N N N 0 1.176 0.883 -1.106
14 H22 H H22 N N N 0 1.177 -0.896 -1.094
15 H31 H H31 N N N 0 0.739 -0.88 1.347
16 H32 H H32 N N N 0 0.738 0.9 1.334
17 H2' H H2' N N N 0 -1.077 -2.13 0.329
18 H3' H H3' N N N 0 -3.453 -2.136 -0.316
19 H4' H H4' N N N 0 -4.642 -0.006 -0.653
20 H5' H H5' N N N 0 -3.455 2.129 -0.344
21 H6' H H6' N N N 0 -1.081 2.135 0.31