Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : GM6

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 56


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 OAG O OAG N N N 0 -5.806 -0.752 1.567
2 NAF N NAF N N N 0 -4.637 -0.023 1.894
3 CAD C CAD N N N 0 -3.563 -0.071 1.081
4 OAE O OAE N N N 0 -3.598 -0.74 0.07
5 CAC C CAC N N N 0 -2.319 0.705 1.429
6 CAB C CAB R N N 0 -1.407 0.781 0.203
7 CAK C CAK N N N 0 0.0 1.094 0.643
8 OAL O OAL N N N 0 0.201 1.569 1.741
9 NAM N NAM N N N 0 1.036 0.847 -0.183
10 CAN C CAN S N N 0 2.41 1.055 0.281
11 CAY C CAY N N N 0 2.857 2.448 -0.083
12 OAZ O OAZ N N N 0 2.401 2.994 -1.066
13 NBB N NBB N N N 0 3.763 3.086 0.683
14 CBA C CBA N N N 0 4.198 4.44 0.329
15 CAO C CAO N N N 0 3.333 0.033 -0.384
16 CAP C CAP N Y N 0 2.963 -1.353 0.077
17 CAT C CAT N Y N 0 3.523 -2.035 1.088
18 NAU N NAU N Y N 0 2.927 -3.26 1.212
19 CAR C CAR N Y N 0 1.943 -3.401 0.26
20 CAV C CAV N Y N 0 1.051 -4.421 -0.053
21 CAX C CAX N Y N 0 0.161 -4.258 -1.092
22 CAW C CAW N Y N 0 0.145 -3.084 -1.832
23 CAS C CAS N Y N 0 1.012 -2.069 -1.542
24 CAQ C CAQ N Y N 0 1.918 -2.21 -0.49
25 CAA C CAA N N N 0 -1.904 1.882 -0.736
26 CAH C CAH N N N 0 -3.256 1.477 -1.327
27 CAJ C CAJ N N N 0 -3.817 2.633 -2.157
28 CAI C CAI N N N 0 -3.074 0.248 -2.22
29 HAG H HAG N N N 0 -6.447 -0.582 2.271
30 HAF H HAF N N N 0 -4.609 0.512 2.703
31 HAC1 H 1HAC N N N 0 -1.794 0.205 2.242
32 HAC2 H 2HAC N N N 0 -2.595 1.713 1.74
33 HAB H HAB N N N 0 -1.42 -0.175 -0.32
34 HAM H HAM N N N 0 0.871 0.53 -1.086
35 HAN H HAN N N N 0 2.45 0.932 1.363
36 HBB H HBB N N N 0 4.128 2.649 1.468
37 HBA1 H 1HBA N N N 0 4.928 4.789 1.059
38 HBA2 H 2HBA N N N 0 4.652 4.428 -0.662
39 HBA3 H 3HBA N N N 0 3.338 5.109 0.327
40 HAO1 H 1HAO N N N 0 3.226 0.096 -1.467
41 HAO2 H 2HAO N N N 0 4.367 0.243 -0.109
42 HAT H HAT N N N 0 4.327 -1.67 1.711
43 HAU H HAU N N N 0 3.163 -3.93 1.873
44 HAV H HAV N N N 0 1.057 -5.339 0.517
45 HAX H HAX N N N 0 -0.53 -5.052 -1.333
46 HAW H HAW N N N 0 -0.559 -2.972 -2.643
47 HAS H HAS N N N 0 0.994 -1.158 -2.123
48 HAA1 H 1HAA N N N 0 -2.016 2.812 -0.178
49 HAA2 H 2HAA N N N 0 -1.184 2.026 -1.541
50 HAH H HAH N N N 0 -3.949 1.24 -0.519
51 HAJ1 H 1HAJ N N N 0 -3.124 2.87 -2.965
52 HAJ2 H 2HAJ N N N 0 -4.78 2.343 -2.579
53 HAJ3 H 3HAJ N N N 0 -3.946 3.508 -1.521
54 HAI1 H 1HAI N N N 0 -2.356 0.475 -3.008
55 HAI2 H 2HAI N N N 0 -2.705 -0.585 -1.621
56 HAI3 H 3HAI N N N 0 -4.031 -0.022 -2.666