Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : F5Q

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 74


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C1 N Y N 0 -2.431 -1.72 -1.127
2 C14 C C2 N Y N 0 0.864 2.174 0.161
3 C5 C C3 N Y N 0 -3.459 -0.838 -0.743
4 C6 C C4 N Y N 0 -4.179 -1.096 0.411
5 C11 C C5 N Y N 0 -1.815 1.948 -0.484
6 C7 C C6 N N N 0 -5.023 0.214 2.197
7 C8 C C7 N N N 0 -6.307 -0.163 2.966
8 C9 C C8 N N N 0 -7.367 -0.281 1.839
9 C10 C C9 N N N 0 -6.527 -0.874 0.68
10 C12 C C10 N Y N 0 -0.899 2.313 -1.453
11 C13 C C11 N Y N 0 0.441 2.425 -1.13
12 N1 N N1 N N N 0 -5.205 -0.224 0.801
13 N2 N N2 N N N 0 -3.749 0.287 -1.519
14 C3 C C12 N Y N 0 -2.148 -2.857 -0.328
15 N3 N N3 N N N 0 9.433 -0.484 0.013
16 O2 O O1 N N N 0 -4.235 1.844 0.333
17 S S S1 N N N 0 -3.522 1.804 -0.895
18 O1 O O2 N N N 0 -3.756 2.715 -1.961
19 C27 C C13 N Y N 0 -1.67 -1.495 -2.288
20 C28 C C14 N Y N 0 -0.684 -2.389 -2.596
21 C29 C C15 N Y N 0 -0.457 -3.487 -1.769
22 N4 N N4 N Y N 0 -1.171 -3.697 -0.69
23 C2 C C16 N Y N 0 -2.901 -3.085 0.835
24 C1 C C17 N Y N 0 -3.891 -2.219 1.189
25 C16 C C18 N Y N 0 -1.391 1.696 0.808
26 C15 C C19 N Y N 0 -0.052 1.809 1.13
27 C17 C C20 N N N 0 2.325 2.29 0.512
28 C18 C C21 N N N 0 3.013 0.941 0.289
29 C19 C C22 N N N 0 4.496 1.06 0.645
30 C20 C C23 N N N 0 5.183 -0.289 0.423
31 C21 C C24 N N N 0 6.666 -0.17 0.778
32 C25 C C25 N N N 0 7.328 -1.547 0.676
33 C24 C C26 N N N 0 8.824 -1.412 0.974
34 C26 C C27 N N N 0 10.892 -0.435 0.18
35 C23 C C28 N N N 0 8.846 0.858 0.125
36 C22 C C29 N N N 0 7.351 0.79 -0.198
37 H1 H H1 N N N 0 -4.875 1.294 2.231
38 H2 H H2 N N N 0 -4.165 -0.294 2.637
39 H3 H H3 N N N 0 -6.183 -1.116 3.479
40 H4 H H4 N N N 0 -6.579 0.623 3.671
41 H5 H H5 N N N 0 -8.169 -0.96 2.127
42 H6 H H6 N N N 0 -7.764 0.699 1.572
43 H7 H H7 N N N 0 -6.432 -1.953 0.795
44 H8 H H8 N N N 0 -6.983 -0.634 -0.28
45 H9 H H9 N N N 0 -1.229 2.51 -2.462
46 H10 H H10 N N N 0 1.157 2.71 -1.887
47 H15 H H15 N N N 0 0.325 -4.185 -2.026
48 H11 H H11 N N N 0 -4.084 0.179 -2.423
49 H13 H H13 N N N 0 -1.859 -0.639 -2.918
50 H14 H H14 N N N 0 -0.081 -2.245 -3.481
51 H16 H H16 N N N 0 -2.695 -3.948 1.451
52 H17 H H17 N N N 0 -4.463 -2.404 2.086
53 H18 H H18 N N N 0 -2.107 1.411 1.564
54 H19 H H19 N N N 0 0.279 1.612 2.139
55 H20 H H20 N N N 0 2.792 3.045 -0.122
56 H21 H H21 N N N 0 2.426 2.582 1.557
57 H22 H H22 N N N 0 2.546 0.187 0.923
58 H23 H H23 N N N 0 2.912 0.65 -0.756
59 H24 H H24 N N N 0 4.962 1.814 0.011
60 H25 H H25 N N N 0 4.597 1.351 1.691
61 H26 H H26 N N N 0 4.716 -1.043 1.056
62 H27 H H27 N N N 0 5.082 -0.58 -0.623
63 H28 H H28 N N N 0 6.769 0.209 1.795
64 H29 H H29 N N N 0 6.873 -2.224 1.399
65 H30 H H30 N N N 0 7.191 -1.943 -0.33
66 H31 H H31 N N N 0 9.301 -2.388 0.888
67 H32 H H32 N N N 0 8.96 -1.029 1.985
68 H33 H H33 N N N 0 11.131 -0.03 1.163
69 H34 H H34 N N N 0 11.301 -1.442 0.093
70 H35 H H35 N N N 0 11.325 0.202 -0.591
71 H36 H H36 N N N 0 8.982 1.23 1.14
72 H37 H H37 N N N 0 9.339 1.53 -0.577
73 H38 H H38 N N N 0 7.215 0.431 -1.218
74 H39 H H39 N N N 0 6.912 1.783 -0.099