Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : CGT

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 47


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 R N N 0 1.642 -0.097 -0.656
2 S1 S S1 N N N 0 0.498 0.02 -2.054
3 C2 C C2 R N N 0 1.783 -1.56 -0.233
4 O2 O O2 N N N 0 0.505 -2.069 0.154
5 C3 C C3 S N N 0 2.75 -1.659 0.948
6 O3 O O3 N N N 0 2.882 -3.026 1.343
7 C4 C C4 R N N 0 4.119 -1.114 0.534
8 O4 O O4 N N N 0 5.022 -1.206 1.637
9 C5 C C5 R N N 0 3.978 0.35 0.11
10 C7 C C7 N N N 0 3.01 0.448 -1.071
11 C6 C C6 N N N 0 5.346 0.895 -0.304
12 O6 O O6 N N N 0 5.236 2.291 -0.588
13 CB C CB N N N 0 -1.744 -1.612 -1.47
14 CG C CG N Y N 0 -3.01 -1.645 -0.653
15 CE2 C CE2 N Y N 0 -4.153 -2.188 1.38
16 CD1 C CD1 N Y N 0 -4.19 -1.162 -1.187
17 CD2 C CD2 N Y N 0 -2.993 -2.162 0.629
18 CE1 C CE1 N Y N 0 -5.351 -1.191 -0.437
19 CZ C CZ N Y N 0 -5.333 -1.704 0.846
20 C13 C C13 N N N 0 -1.025 -0.31 -1.23
21 N17 N N17 N N N 0 -1.525 0.566 -0.421
22 O18 O O18 N N N 0 -0.911 1.834 -0.282
23 S19 S S19 N N N 0 -1.804 2.657 0.635
24 O20 O O20 N N N 0 -3.137 2.339 0.263
25 O21 O O21 N N N 0 -1.243 3.963 0.649
26 O22 O O22 N N N 0 -1.628 2.116 2.047
27 H1 H H1 N N N 0 1.256 0.487 0.179
28 H2 H H2 N N N 0 2.169 -2.144 -1.068
29 HA H HA N N N 0 0.638 -2.992 0.413
30 H3 H H3 N N N 0 2.365 -1.075 1.784
31 HB H HB N N N 0 2.0 -3.33 1.596
32 H4 H H4 N N N 0 4.505 -1.698 -0.302
33 HC H HC N N N 0 5.082 -2.142 1.871
34 H5 H H5 N N N 0 3.592 0.934 0.946
35 H7C1 H 1H7C N N N 0 2.91 1.491 -1.372
36 H7C2 H 2H7C N N N 0 3.396 -0.136 -1.906
37 H6C1 H 1H6C N N N 0 5.692 0.369 -1.194
38 H6C2 H 2H6C N N N 0 6.058 0.744 0.507
39 H6 H H6 N N N 0 6.118 2.594 -0.844
40 HBC1 H 1HBC N N N 0 -1.992 -1.702 -2.527
41 HBC2 H 2HBC N N N 0 -1.101 -2.442 -1.176
42 HD1 H HD1 N N N 0 -4.205 -0.761 -2.19
43 HD2 H HD2 N N N 0 -2.071 -2.54 1.046
44 HE1 H HE1 N N N 0 -6.273 -0.813 -0.855
45 HE2 H HE2 N N N 0 -4.138 -2.588 2.383
46 HZ H HZ N N N 0 -6.24 -1.726 1.432
47 H22 H H22 N N N 0 -2.198 2.645 2.622