Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : CGT

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 47


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 R N N 0 1.642 -0.097 -0.656
2 C13 C C13 N N N 0 -1.025 -0.31 -1.23
3 C2 C C2 R N N 0 1.783 -1.56 -0.233
4 C3 C C3 S N N 0 2.75 -1.659 0.948
5 C4 C C4 R N N 0 4.119 -1.114 0.534
6 C5 C C5 R N N 0 3.978 0.35 0.11
7 C6 C C6 N N N 0 5.346 0.895 -0.304
8 C7 C C7 N N N 0 3.01 0.448 -1.071
9 CB C CB N N N 0 -1.744 -1.612 -1.47
10 CD1 C CD1 N Y N 0 -4.19 -1.162 -1.187
11 CD2 C CD2 N Y N 0 -2.993 -2.162 0.629
12 CE1 C CE1 N Y N 0 -5.351 -1.191 -0.437
13 CE2 C CE2 N Y N 0 -4.153 -2.188 1.38
14 CG C CG N Y N 0 -3.01 -1.645 -0.653
15 CZ C CZ N Y N 0 -5.333 -1.704 0.846
16 H1 H H1 N N N 0 1.256 0.487 0.179
17 H2 H H2 N N N 0 2.169 -2.144 -1.068
18 H22 H H22 N N N 0 -2.198 2.645 2.622
19 H3 H H3 N N N 0 2.365 -1.075 1.784
20 H4 H H4 N N N 0 4.505 -1.698 -0.302
21 H5 H H5 N N N 0 3.592 0.934 0.946
22 H6 H H6 N N N 0 6.118 2.594 -0.844
23 H6C1 H 1H6C N N N 0 5.692 0.369 -1.194
24 H6C2 H 2H6C N N N 0 6.058 0.744 0.507
25 H7C1 H 1H7C N N N 0 2.91 1.491 -1.372
26 H7C2 H 2H7C N N N 0 3.396 -0.136 -1.906
27 HA H HA N N N 0 0.638 -2.992 0.413
28 HB H HB N N N 0 2.0 -3.33 1.596
29 HBC1 H 1HBC N N N 0 -1.992 -1.702 -2.527
30 HBC2 H 2HBC N N N 0 -1.101 -2.442 -1.176
31 HC H HC N N N 0 5.082 -2.142 1.871
32 HD1 H HD1 N N N 0 -4.205 -0.761 -2.19
33 HD2 H HD2 N N N 0 -2.071 -2.54 1.046
34 HE1 H HE1 N N N 0 -6.273 -0.813 -0.855
35 HE2 H HE2 N N N 0 -4.138 -2.588 2.383
36 HZ H HZ N N N 0 -6.24 -1.726 1.432
37 N17 N N17 N N N 0 -1.525 0.566 -0.421
38 O18 O O18 N N N 0 -0.911 1.834 -0.282
39 O2 O O2 N N N 0 0.505 -2.069 0.154
40 O20 O O20 N N N 0 -3.137 2.339 0.263
41 O21 O O21 N N N 0 -1.243 3.963 0.649
42 O22 O O22 N N N 0 -1.628 2.116 2.047
43 O3 O O3 N N N 0 2.882 -3.026 1.343
44 O4 O O4 N N N 0 5.022 -1.206 1.637
45 O6 O O6 N N N 0 5.236 2.291 -0.588
46 S1 S S1 N N N 0 0.498 0.02 -2.054
47 S19 S S19 N N N 0 -1.804 2.657 0.635