Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : CGT    

Bonds between two atoms of the molecule

Total Number of Bonds: 48


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 S1 C S sing 1.81 N N
2 C1 C2 C C sing 1.53 N N
3 C1 C7 C C sing 1.53 N N
4 C1 H1 C H sing 1.09 N N
5 S1 C13 S C sing 1.76 N N
6 C2 O2 C O sing 1.43 N N
7 C2 C3 C C sing 1.53 N N
8 C2 H2 C H sing 1.09 N N
9 O2 HA O H sing 0.97 N N
10 C3 O3 C O sing 1.43 N N
11 C3 C4 C C sing 1.53 N N
12 C3 H3 C H sing 1.09 N N
13 O3 HB O H sing 0.97 N N
14 C4 O4 C O sing 1.43 N N
15 C4 C5 C C sing 1.53 N N
16 C4 H4 C H sing 1.09 N N
17 O4 HC O H sing 0.97 N N
18 C5 C7 C C sing 1.53 N N
19 C5 C6 C C sing 1.53 N N
20 C5 H5 C H sing 1.09 N N
21 C7 H7C1 C H sing 1.09 N N
22 C7 H7C2 C H sing 1.09 N N
23 C6 O6 C O sing 1.43 N N
24 C6 H6C1 C H sing 1.09 N N
25 C6 H6C2 C H sing 1.09 N N
26 O6 H6 O H sing 0.97 N N
27 CB CG C C sing 1.51 N N
28 CB C13 C C sing 1.51 N N
29 CB HBC1 C H sing 1.09 N N
30 CB HBC2 C H sing 1.09 N N
31 CG CD1 C C doub 1.38 N Y
32 CG CD2 C C sing 1.38 N Y
33 CD1 CE1 C C sing 1.38 N Y
34 CD1 HD1 C H sing 1.08 N N
35 CD2 CE2 C C doub 1.38 N Y
36 CD2 HD2 C H sing 1.08 N N
37 CE1 CZ C C doub 1.38 N Y
38 CE1 HE1 C H sing 1.08 N N
39 CE2 CZ C C sing 1.38 N Y
40 CE2 HE2 C H sing 1.08 N N
41 CZ HZ C H sing 1.08 N N
42 C13 N17 C N doub 1.29 Z N
43 N17 O18 N O sing 1.42 N N
44 O18 S19 O S sing 1.52 N N
45 S19 O20 S O doub 1.42 N N
46 S19 O21 S O doub 1.42 N N
47 S19 O22 S O sing 1.52 N N
48 O22 H22 O H sing 0.97 N N