Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : B6G

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 50


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C8 C C1 R N N 0 1.994 -0.519 -0.34
2 C5 C C2 S N N 0 -0.006 -1.537 0.354
3 C6 C C3 S N N 0 0.7 -2.514 -0.61
4 N1 N N1 N Y N 0 3.165 0.056 0.328
5 C2 C C4 N N N 0 -6.944 2.591 -1.696
6 N3 N N2 N Y N 0 6.723 1.561 -0.884
7 C4 C C5 N N N 0 -4.844 0.199 0.432
8 O7 O O1 N N N 0 -4.885 0.23 1.639
9 C3 C C6 S N N 0 -6.021 0.681 -0.376
10 N N N3 N N N 0 -7.225 0.681 0.466
11 C1 C C7 N N N 0 -5.749 2.101 -0.876
12 C C C8 N N N 0 -4.495 2.101 -1.753
13 O O O2 N N N 0 -3.749 -0.267 -0.19
14 P P P1 N N N 0 -2.534 -0.763 0.742
15 O5 O O3 N N N 0 -3.001 -2.049 1.591
16 O6 O O4 N N N 0 -2.146 0.324 1.668
17 O1 O O5 N N N 0 -1.276 -1.157 -0.181
18 O4 O O6 N N N 0 0.83 -0.382 0.489
19 C7 C C9 R N N 0 2.179 -2.046 -0.528
20 O3 O O7 N N N 0 2.878 -2.335 -1.741
21 O2 O O8 N N N 0 0.194 -2.371 -1.939
22 C13 C C10 N Y N 0 3.324 0.227 1.671
23 N5 N N4 N Y N 0 4.483 0.765 1.916
24 C12 C C11 N Y N 0 5.14 0.973 0.75
25 C9 C C12 N Y N 0 4.304 0.515 -0.283
26 C11 C C13 N Y N 0 6.392 1.508 0.402
27 N4 N N5 N N N 0 7.26 1.969 1.377
28 C10 C C14 N Y N 0 5.907 1.108 -1.819
29 N2 N N6 N Y N 0 4.724 0.603 -1.541
30 H1 H H1 N N N 0 1.833 -0.034 -1.303
31 H2 H H2 N N N 0 -0.142 -2.011 1.327
32 H3 H H3 N N N 0 0.599 -3.542 -0.264
33 H4 H H4 N N N 0 -7.838 2.591 -1.071
34 H5 H H5 N N N 0 -6.75 3.603 -2.052
35 H6 H H6 N N N 0 -7.097 1.929 -2.548
36 H7 H H7 N N N 0 -6.174 0.019 -1.228
37 H8 H H8 N N N 0 -7.109 1.288 1.263
38 H9 H H9 N N N 0 -8.041 0.939 -0.069
39 H11 H H11 N N N 0 -5.597 2.764 -0.024
40 H12 H H12 N N N 0 -4.301 3.113 -2.109
41 H13 H H13 N N N 0 -3.643 1.752 -1.169
42 H14 H H14 N N N 0 -4.647 1.439 -2.605
43 H15 H H15 N N N 0 -3.27 -2.803 1.048
44 H16 H H16 N N N 0 2.684 -2.49 0.33
45 H17 H H17 N N N 0 2.923 -3.277 -1.954
46 H18 H H18 N N N 0 -0.726 -2.65 -2.042
47 H19 H H19 N N N 0 2.595 -0.043 2.421
48 H20 H H20 N N N 0 8.121 2.336 1.124
49 H21 H H21 N N N 0 7.006 1.925 2.312
50 H22 H H22 N N N 0 6.216 1.171 -2.852