Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : AXW

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 53


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 F22 F F22 N N N 0 -2.593 -0.933 -1.644
2 C22 C C22 N Y N 0 -3.617 -1.166 -0.793
3 C23 C C23 N Y N 0 -3.968 -2.466 -0.471
4 C24 C C24 N Y N 0 -5.015 -2.702 0.4
5 C25 C C25 N Y N 0 -5.712 -1.641 0.948
6 C26 C C26 N Y N 0 -5.362 -0.343 0.627
7 C21 C C21 N Y N 0 -4.311 -0.104 -0.239
8 C13 C C13 N N N 0 -3.93 1.311 -0.589
9 N12 N N12 N N N 0 -2.697 1.676 0.122
10 C11 C C11 N N N 0 -2.294 3.053 -0.197
11 C10 C C10 N N N 0 -1.01 3.396 0.56
12 O09 O O09 N N N 0 0.057 2.571 0.087
13 C4' C C4' S N N 0 1.309 2.812 0.732
14 C5' C C5' N N N 0 2.118 3.871 -0.048
15 N1' N N1' N N N 0 3.528 3.413 0.053
16 C2' C C2' N N N 0 3.443 1.936 -0.091
17 C3' C C3' S N N 0 2.181 1.54 0.703
18 C08 C C08 N N N 0 1.441 0.405 -0.007
19 C06 C C06 N Y N 0 2.287 -0.842 0.021
20 N01 N N01 N Y N 0 3.518 -0.804 -0.453
21 C02 C C02 N Y N 0 4.297 -1.874 -0.448
22 N02 N N02 N N N 0 5.588 -1.789 -0.958
23 C03 C C03 N Y N 0 3.835 -3.084 0.062
24 C05 C C05 N Y N 0 1.766 -2.007 0.547
25 C04 C C04 N Y N 0 2.549 -3.154 0.566
26 C07 C C07 N N N 0 2.011 -4.445 1.128
27 H1 H H1 N N N 0 -3.425 -3.295 -0.9
28 H2 H H2 N N N 0 -5.29 -3.716 0.651
29 H3 H H3 N N N 0 -6.53 -1.827 1.628
30 H4 H H4 N N N 0 -5.907 0.485 1.056
31 H5 H H5 N N N 0 -3.766 1.388 -1.664
32 H6 H H6 N N N 0 -4.733 1.987 -0.294
33 H7 H H7 N N N 0 -1.954 1.025 -0.085
34 H9 H H9 N N N 0 -2.119 3.142 -1.269
35 H10 H H10 N N N 0 -3.086 3.741 0.101
36 H11 H H11 N N N 0 -0.759 4.444 0.395
37 H12 H H12 N N N 0 -1.158 3.222 1.626
38 H13 H H13 N N N 0 1.148 3.14 1.759
39 H14 H H14 N N N 0 1.802 3.9 -1.091
40 H15 H H15 N N N 0 2.002 4.852 0.411
41 H16 H H16 N N N 0 3.928 3.667 0.944
42 H18 H H18 N N N 0 3.334 1.663 -1.141
43 H19 H H19 N N N 0 4.327 1.462 0.335
44 H20 H H20 N N N 0 2.449 1.24 1.716
45 H21 H H21 N N N 0 0.495 0.214 0.501
46 H25 H H25 N N N 0 4.473 -3.955 0.065
47 H22 H H22 N N N 0 1.246 0.689 -1.041
48 H23 H H23 N N N 0 5.914 -0.948 -1.314
49 H24 H H24 N N N 0 6.162 -2.571 -0.956
50 H26 H H26 N N N 0 0.758 -2.028 0.933
51 H27 H H27 N N N 0 2.232 -4.497 2.194
52 H28 H H28 N N N 0 0.932 -4.484 0.977
53 H29 H H29 N N N 0 2.48 -5.286 0.618