Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 9YH

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 59


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 CBC C C1 N N N 0 7.874 1.217 0.605
2 OAX O O1 N N N 0 6.767 0.341 0.381
3 CAR C C2 N Y N 0 5.653 0.885 -0.178
4 CAS C C3 N Y N 0 4.538 0.09 -0.425
5 OAY O O2 N N N 0 4.56 -1.232 -0.107
6 CAQ C C4 N Y N 0 5.624 2.232 -0.498
7 CAE C C5 N Y N 0 4.49 2.784 -1.066
8 CAF C C6 N Y N 0 3.385 1.993 -1.316
9 CAG C C7 N Y N 0 3.405 0.648 -0.995
10 CAH C C8 N N N 0 2.198 -0.211 -1.269
11 N N N1 N N N 0 1.337 -0.24 -0.079
12 CA C C9 N N N 0 1.925 -1.078 0.975
13 C C C10 N N N 0 2.03 -2.5 0.487
14 OXT O O3 N N N 0 2.457 -3.465 1.317
15 O O O4 N N N 0 1.729 -2.772 -0.651
16 CAJ C C11 N N N 0 -0.017 -0.696 -0.42
17 CAK C C12 N N N 0 -0.976 -0.341 0.718
18 NAL N N2 N N N 0 -2.313 -0.867 0.414
19 CAT C C13 N N N 0 -2.311 -2.336 0.404
20 CAZ C C14 N N N 0 -3.561 -2.836 -0.273
21 OBD O O5 N N N 0 -3.83 -4.151 -0.299
22 OBA O O6 N N N 0 -4.321 -2.054 -0.792
23 CAM C C15 N N N 0 -3.311 -0.348 1.359
24 CAN C C16 N Y N 0 -3.421 1.147 1.203
25 CAO C C17 N Y N 0 -2.799 1.984 2.108
26 CAP C C18 N Y N 0 -2.899 3.355 1.966
27 CAW C C19 N Y N 0 -3.621 3.894 0.916
28 CAV C C20 N Y N 0 -4.246 3.064 0.007
29 CAU C C21 N Y N 0 -4.142 1.684 0.144
30 SBB S S1 N N N 0 -4.932 0.621 -1.018
31 CBE C C22 N N N 0 -5.717 1.783 -2.168
32 H1 H H1 N N N 0 8.2 1.641 -0.344
33 H2 H H2 N N N 0 7.571 2.02 1.277
34 H3 H H3 N N N 0 8.695 0.658 1.054
35 H4 H H4 N N N 0 4.349 -1.418 0.818
36 H5 H H5 N N N 0 6.486 2.852 -0.303
37 H6 H H6 N N N 0 4.469 3.834 -1.315
38 H7 H H7 N N N 0 2.501 2.427 -1.76
39 H8 H H8 N N N 0 1.641 0.203 -2.11
40 H9 H H9 N N N 0 2.52 -1.224 -1.51
41 H11 H H11 N N N 0 2.919 -0.705 1.224
42 H12 H H12 N N N 0 1.292 -1.044 1.862
43 H13 H H13 N N N 0 2.507 -4.361 0.959
44 H14 H H14 N N N 0 -0.345 -0.208 -1.337
45 H15 H H15 N N N 0 -0.011 -1.776 -0.566
46 H16 H H16 N N N 0 -0.616 -0.781 1.648
47 H17 H H17 N N N 0 -1.028 0.743 0.825
48 H19 H H19 N N N 0 -1.436 -2.695 -0.138
49 H20 H H20 N N N 0 -2.281 -2.706 1.429
50 H21 H H21 N N N 0 -4.644 -4.424 -0.745
51 H22 H H22 N N N 0 -4.279 -0.807 1.154
52 H23 H H23 N N N 0 -3.005 -0.586 2.377
53 H24 H H24 N N N 0 -2.235 1.566 2.929
54 H25 H H25 N N N 0 -2.411 4.008 2.675
55 H26 H H26 N N N 0 -3.697 4.966 0.808
56 H27 H H27 N N N 0 -4.81 3.486 -0.811
57 H28 H H28 N N N 0 -6.425 2.409 -1.625
58 H29 H H29 N N N 0 -4.954 2.412 -2.626
59 H30 H H30 N N N 0 -6.244 1.227 -2.943