Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : 65T

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 27


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 OXY O OXY N N Y 0 6.908 1.383 0.014
2 C C C N N N 0 6.021 0.369 0.004
3 O O O N N N 0 6.412 -0.78 -0.008
4 CA C CA N N N 0 4.574 0.655 0.007
5 N3 N N3 N N N 0 3.722 -0.317 -0.003
6 O4 O O4 N N N 0 2.333 -0.043 0.0
7 C11 C C11 N N N 0 1.51 -1.211 -0.013
8 C01 C C12 N Y N 0 0.059 -0.802 -0.008
9 C02 C C13 N Y N 0 -0.606 -0.603 -1.204
10 C03 C C14 N Y N 0 -1.937 -0.228 -1.2
11 C04 C C15 N Y N 0 -2.602 -0.054 -0.001
12 S07 S S1 N N N 0 -4.298 0.424 0.004
13 NP0 N N4 N N N 0 -5.199 -0.965 -0.011
14 O09 O O5 N N N 0 -4.537 1.044 1.261
15 O08 O O6 N N N 0 -4.536 1.071 -1.238
16 C05 C C16 N Y N 0 -1.937 -0.255 1.195
17 C06 C C17 N Y N 0 -0.608 -0.633 1.191
18 H02 H H22 N N N 0 -0.086 -0.739 -2.14
19 H03 H H23 N N N 0 -2.457 -0.071 -2.133
20 HP01 H H24 N N N 0 -4.758 -1.829 -0.02
21 HP02 H H25 N N N 0 -6.168 -0.915 -0.01
22 H05 H H26 N N N 0 -2.457 -0.119 2.131
23 H06 H H27 N N N 0 -0.089 -0.793 2.124
24 HXY H HXY N N Y 0 7.846 1.146 0.012
25 H2 H H2 N N N 0 4.226 1.678 0.017
26 H3 H H3 N N N 0 1.72 -1.794 -0.909
27 H4 H H4 N N N 0 1.72 -1.813 0.871